CI01000001_11440491_11445508


Basic Information

Item Value
gene id CI01000001_11440491_11445508
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11439979 ~ 11445540 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11440491_11445508.mRNA
GTTTAAATGACGGCCCAGCCTTTTGCTGGGCGGCCTGACACACTTGATGCCTTGCCAGGCACGGTCACAGTATGTGTGTGTGTTTGGTGTATTAAGTGGCGCTTTATCAAATTAGTTTGGTACCCAGCTGATGAGTAATAAAGGTACAGTGGAGCCCCCACTGACTCCCAGACATCAATCCTCTGAGCGGGAGCCAAACGCAAGGCCTGGCACTGCCTGAGGCGTACAGAGCACCTCTCCCCACTGATCAGCTTATGGACTCTCTTCAACCAAACTAATATTAACACTGGGCATGTGGAGGGCTTCAGCTGTCTCACCACTGCGAGGAATAACGCTTAATGGTTGATGTAACAGGTAGGTCTTTTATTTAAACCATTGCTGTGGGCTTTTGTTTTTCATCTTGTTTACCATCTTTATCAGAGTCGATGGCCTGCCGCTGTACATTTTTCCAGACGTCGTCCTCTTAAAACATTGGCTCTCAGGTGTCGAACAGACAGGAGACGAGAGGGGAGATGATAGTGAGATCAAACGGAGGACTGGAAGGACGGCGAGAACAGAGAAGGAGAGAGAGGGAACTACCGCCGCACGACTGTAATCTCGCTCAGCGTTTGGCTTTTACACAAATACAACTAAATGCAAAGCGCCAGAAGAAGGTGGAACGGAGGGGAGGGTGGGACATCAGAGGGCTTCAAGCCCGTCGAGGAGTTGTGCGTGTCAGTTCAGAGCAGCCGCTGGGACTAACAGTAGAGAACAGAAGACGAGTCACTCAGACAGAAGAATTTGAGACTAAGCATCAAATTAATATCATGGGCCGGACAGCCTCAAACTGCACATTATGCTGTGAGCAGGATAAGAAACGCTCATGTAGCCGGACATGTTATCCTGGACCAACCACTAATAGCGTTAGCACGAAAGCAAATTGACAGTGTTTGAGCAAAATTAAACAAACAGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11440491_11445508.mRNA True 955 mRNA 0.49 3 11439979 11445540

Neighbor

gene id symbol gene type direction distance location
CI01000001_11431153_11431434 NA coding upstream 8392 11429876 ~ 11431587 (+)
CI01000001_11359106_11376288 NA coding upstream 63094 11359106 ~ 11376885 (+)
CI01000001_11265638_11283027 MASP2 coding upstream 156743 11265638 ~ 11283236 (+)
CI01000001_11246797_11247315 CORT, SST3 coding upstream 192438 11246649 ~ 11247541 (+)
CI01000001_11232168_11238289 SRM coding upstream 201324 11232168 ~ 11238655 (+)
CI01000001_11656975_11660666 TARDBPL, TARDBP coding downstream 210489 11656029 ~ 11661866 (+)
CI01000001_11756218_11760009 NA coding downstream 310621 11756161 ~ 11761497 (+)
CI01000001_11809724_11812692 LZIC coding downstream 363887 11809427 ~ 11813444 (+)
CI01000001_11898621_11898914 NA coding downstream 452757 11898297 ~ 11900188 (+)
CI01000001_11990189_11991073 AURKAIP1 coding downstream 542537 11988077 ~ 11991195 (+)
G19259 NA non-coding upstream 50121 11389555 ~ 11389858 (+)
G19258 NA non-coding upstream 52020 11387643 ~ 11387959 (+)
G19108 NA non-coding upstream 57992 11381574 ~ 11381987 (+)
G19096 NA non-coding upstream 135955 11255069 ~ 11304024 (+)
G19226 NA non-coding upstream 256209 11169293 ~ 11183770 (+)
G19312 NA non-coding downstream 54677 11500217 ~ 11500514 (+)
G19349 NA non-coding downstream 223424 11668964 ~ 11670995 (+)
G19394 NA non-coding downstream 235167 11680707 ~ 11680946 (+)
G19351 NA non-coding downstream 237017 11682557 ~ 11687675 (+)
G19362 NA non-coding downstream 244385 11689925 ~ 11690609 (+)
G19039 NA other upstream 585996 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 900133 10538388 ~ 10539846 (+)
G18937 NA other upstream 963590 10474984 ~ 10476389 (+)
CI01000001_10395420_10396473 NA other upstream 1043274 10394851 ~ 10396705 (+)
G18872 NA other upstream 1158610 10271146 ~ 10281369 (+)
G19314 NA other downstream 55654 11501194 ~ 11558673 (+)
G19395 NA other downstream 235782 11681322 ~ 11681817 (+)
CI01000001_13514115_13517063 NA other downstream 2067864 13514115 ~ 13517063 (+)

Expression


Co-expression Network