CI01000001_11665402_11666409


Basic Information

Item Value
gene id CI01000001_11665402_11666409
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 11665119 ~ 11666949 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_11665402_11666409.mRNA
ATGGTGAATGAGGTGATTCAGCACATGGAGAGCCAGGAGAGGAAGTGGACACCATCTTTTGATCCGTCTCCTGATTAATTATGCATCAGCAGTGGGGAGGAGTCAGACTATGGTTAAGTCCGACACAAACACGAGATGCTGCAGTTTGAACAGACTATTACCAAAGATCAACACTTCCTTTAAGAGCTGATGTATGTATAATCAAGCATGATTCATCTTTATGCATGATTACAGTTGTGTTAAGGTGACTTTAGGGTGCCTTTTAGAGCTTGTGGGGATTGTATTTGTTGTCATATAGGAACTAATGGAATAAATTACTGTACATTTGATAAGGATGTTTGTACGATTTACCCTTGAAACTGTGCAAGATGGTGTCCCCACAATAAGATAAGATAAAATAGTCTATTTATTTAAAACATGCTAATGTGCCCTCTTAATTAACAATAACCTAATTTAGATATCACTAAATGAGGTAATTTCCTAATGGATTTCCCATCCTGTACTGTATCAGTATTGTTTGCGAGGGTACCTCTGTAAAACATGACAATGGGAGCTGGATGGGACAATCGCTCAGCGGTCGAGAGAAGCATGTTCATTGTGCGGATGCTGCTGAGCCTGTTTCCTCTACTCCTTGTGGTCTGGAATGGTGAGGCATTACCTGTACCAGACAAACTATCACAAACCAATGAGATACTTACCAAAGACCAAAAGGACTTGTTGACGAAGATGATGACGGATATGGCAGAGCTGAACCTCACTAGTAAAGAACTAGCTGATCTTGACCCTGATTTTCTGAATGGCAAACTGGGAGAGGATTCTGTTGTTGTACAGCCAACCCCTAAAGATAAATCTCCATGCAAGCTCTTCTTCTGGAAGTCCTTTTCCTCATGTTAAAGCTGGAAAACAGAACAAGTCTGTTGAAATCTACAGTCCTGCCTTTACAGTTTGCCAGTATAATCATAAACATTGTATTGAAATCAATATCCCTTGGTTTTTGCTGTTCCTGTATTGTATTTTATGTCTGATGAATTTTGAAAGAATGATTTACTGAGATATGAATTTATAGTGTGAAACAGCTTATTGTTTGAACTAACAGAAATCTTTAAATAATACAGTGGACTTTTGCATGTACACTTTATACTGTTTGACATCCAAGCTCAAAGAAACGTGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_11665402_11666409.mRNA True 1177 mRNA 0.38 2 11665119 11666949

Neighbor

gene id symbol gene type direction distance location
CI01000001_11654628_11655345 NA coding downstream 9752 11654567 ~ 11655367 (-)
CI01000001_11649219_11650300 NA coding downstream 14819 11649062 ~ 11650300 (-)
CI01000001_11472071_11477723 NA coding downstream 187345 11471970 ~ 11477774 (-)
CI01000001_11446246_11449035 NA coding downstream 216053 11445886 ~ 11449066 (-)
CI01000001_11397805_11428592 CASZ1 coding downstream 236456 11397396 ~ 11428663 (-)
CI01000001_11677994_11680279 PGD coding upstream 11045 11677994 ~ 11680840 (-)
CI01000001_11685422_11713351 KIF1B coding upstream 18023 11684972 ~ 11713486 (-)
CI01000001_11715436_11736738 KIF1B coding upstream 48163 11715112 ~ 11736738 (-)
CI01000001_11768247_11795338 UBE4B coding upstream 101123 11768072 ~ 11795338 (-)
CI01000001_11798501_11800359 RBP7A coding upstream 130908 11797857 ~ 11801596 (-)
G20494 NA non-coding downstream 1295 11663575 ~ 11663824 (-)
CI01000001_11385404_11386042 NA non-coding downstream 277782 11383448 ~ 11388934 (-)
G20276 NA non-coding downstream 381768 11267587 ~ 11283351 (-)
G20385 NA non-coding downstream 438610 11223648 ~ 11226509 (-)
G20378 NA non-coding downstream 447730 11217021 ~ 11217389 (-)
G20496 NA non-coding upstream 14311 11681260 ~ 11681753 (-)
G20501 NA non-coding upstream 166659 11833608 ~ 11833881 (-)
G20588 NA non-coding upstream 221563 11888512 ~ 11889125 (-)
CI01000001_11906787_11948732 PIK3CD non-coding upstream 223356 11906774 ~ 11949296 (-)
G20593 NA non-coding upstream 323234 11990183 ~ 11991216 (-)
G20315 NA other downstream 544289 11116755 ~ 11120830 (-)
G20319 NA other downstream 550372 11110837 ~ 11114747 (-)
G20230 NA other downstream 636342 11022127 ~ 11028777 (-)
CI01000001_10862471_10864514 NA other downstream 800199 10862225 ~ 10865770 (-)
G20136 NA other downstream 1125269 10539027 ~ 10539850 (-)
CI01000001_12878462_12899012 NA other upstream 1206449 12878365 ~ 12899469 (-)
CI01000001_12921289_12924608 NA other upstream 1253650 12920599 ~ 12925496 (-)
G20555 NA other upstream 1675040 13341989 ~ 13348146 (-)

Expression


Co-expression Network