trnap-ugg_21


Basic Information

Item Value
gene id trnap-ugg_21
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2092233 ~ 2092304 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2274
GGCTCGTTGGTCTAAGGGtgtgattctcgctttgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2274 True 72 tRNA 0.61 1 2092233 2092304

Neighbor

gene id symbol gene type direction distance location
trnai-aau_79 NA coding downstream 83 2092077 ~ 2092150 (-)
trnaf-gaa_88 NA coding downstream 243 2091918 ~ 2091990 (-)
trnaq-cug_29 NA coding downstream 406 2091756 ~ 2091827 (-)
trnap-ugg_20 NA coding downstream 1299 2090863 ~ 2090934 (-)
trnai-aau_78 NA coding downstream 1468 2090693 ~ 2090765 (-)
trnaq-cug_30 NA coding upstream 823 2093127 ~ 2093198 (-)
trnaf-gaa_89 NA coding upstream 985 2093289 ~ 2093361 (-)
trnai-aau_80 NA coding upstream 1137 2093441 ~ 2093514 (-)
trnap-ugg_22 NA coding upstream 1293 2093597 ~ 2093668 (-)
trnaq-cug_31 NA coding upstream 2187 2094491 ~ 2094562 (-)
G135480 NA non-coding downstream 214111 1877914 ~ 1878122 (-)
G135435 NA non-coding downstream 339286 1752733 ~ 1752947 (-)
G135434 NA non-coding downstream 339777 1752156 ~ 1752456 (-)
G135433 NA non-coding downstream 342430 1749595 ~ 1749803 (-)
G135430 NA non-coding downstream 346577 1745359 ~ 1745656 (-)
G135542 NA non-coding upstream 7692 2099996 ~ 2100241 (-)
G135546 NA non-coding upstream 266174 2358478 ~ 2358691 (-)
G135627 NA non-coding upstream 484828 2577132 ~ 2577488 (-)
G135629 NA non-coding upstream 486965 2579269 ~ 2579702 (-)
G135658 marcks,LOC107709525,LOC107676707,LOC107570520,LOC107715691,LOC107670244 non-coding upstream 551877 2644181 ~ 2647081 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other downstream 78706 2005549 ~ 2013527 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other downstream 215941 1840128 ~ 1876292 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 431697 1655096 ~ 1660536 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other downstream 520534 1546487 ~ 1571699 (-)
G135279 NA other downstream 981372 1110425 ~ 1110861 (-)
G135548 NA other upstream 271749 2364053 ~ 2364824 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 648248 2740552 ~ 2757430 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 1545985 3638289 ~ 3870066 (-)
LOC122325550 NA other upstream 1876459 3968763 ~ 3975258 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other upstream 2472052 4564356 ~ 4582097 (-)

Expression


Co-expression Network