trnaq-cug_33


Basic Information

Item Value
gene id trnaq-cug_33
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 2110209 ~ 2110280 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2289
ggttccatggtgtaatggttagcactttggactctgaatccagcgatccgagttcaaatttcggtgggacct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2289 True 72 tRNA 0.49 1 2110209 2110280

Neighbor

gene id symbol gene type direction distance location
trnai-aau_83 NA coding downstream 12589 2097547 ~ 2097620 (-)
trnaf-gaa_92 NA coding downstream 12747 2097390 ~ 2097462 (-)
trnap-ugg_24 NA coding downstream 13804 2096334 ~ 2096405 (-)
trnai-aau_82 NA coding downstream 13958 2096178 ~ 2096251 (-)
trnaf-gaa_91 NA coding downstream 14117 2096020 ~ 2096092 (-)
trnaf-gaa_93 NA coding upstream 91 2110371 ~ 2110443 (-)
trnai-aau_84 NA coding upstream 250 2110530 ~ 2110603 (-)
trnap-ugg_25 NA coding upstream 406 2110686 ~ 2110757 (-)
trnaq-cug_34 NA coding upstream 1300 2111580 ~ 2111651 (-)
trnaf-gaa_94 NA coding upstream 1462 2111742 ~ 2111814 (-)
G135542 NA non-coding downstream 9968 2099996 ~ 2100241 (-)
G135480 NA non-coding downstream 232087 1877914 ~ 1878122 (-)
G135435 NA non-coding downstream 357262 1752733 ~ 1752947 (-)
G135434 NA non-coding downstream 357753 1752156 ~ 1752456 (-)
G135433 NA non-coding downstream 360406 1749595 ~ 1749803 (-)
G135546 NA non-coding upstream 248198 2358478 ~ 2358691 (-)
G135627 NA non-coding upstream 466852 2577132 ~ 2577488 (-)
G135629 NA non-coding upstream 468989 2579269 ~ 2579702 (-)
G135658 marcks,LOC107709525,LOC107676707,LOC107570520,LOC107715691,LOC107670244 non-coding upstream 533901 2644181 ~ 2647081 (-)
G135674 LOC107715685,LOC107670242,LOC107714794 non-coding upstream 622323 2732603 ~ 2737889 (-)
G135527 LOC107731523,LOC107660498,LOC107575177,LOC107657216,LOC107549340,LOC107730404 other downstream 96682 2005549 ~ 2013527 (-)
myo6a myo6a,myo6,LOC107660505,LOC107707325,LOC107680308 other downstream 233917 1840128 ~ 1876292 (-)
pnrc1 pnrc1,LOC107731511,LOC107660527 other downstream 449673 1655096 ~ 1660536 (-)
pcmt pcmt,pcmt1,LOC107660522,LOC107742992,LOC107550534 other downstream 538510 1546487 ~ 1571699 (-)
G135279 NA other downstream 999348 1110425 ~ 1110861 (-)
G135548 NA other upstream 253773 2364053 ~ 2364824 (-)
cep170bb LOC107670249,LOC107715684,LOC107714793,LOC107550527 other upstream 630272 2740552 ~ 2757430 (-)
nrxn3b nrxn3b,LOC107747953,LOC108410406,LOC106571678,LOC102203786,LOC101486071,LOC105017684 other upstream 1528009 3638289 ~ 3870066 (-)
LOC122325550 NA other upstream 1858483 3968763 ~ 3975258 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other upstream 2454076 4564356 ~ 4582097 (-)

Expression


Co-expression Network