trnal-caa_1


Basic Information

Item Value
gene id trnal-caa_1
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5542277 ~ 5542388 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2445
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2445 True 84 tRNA 0.54 2 5542277 5542388

Neighbor

gene id symbol gene type direction distance location
tagapb tagapb,LOC107685761,LOC107745285,LOC107733310,LOC107667698,LOC107549517,LOC107562296 coding downstream 4901 5520146 ~ 5537376 (-)
rsph3 rsph3,LOC107562297 coding downstream 28237 5504256 ~ 5514040 (-)
LOC122324477 ezrb,ezr,LOC107685759,LOC107745284,LOC107549516,LOC107733309,LOC107659875,LOC106607585 coding downstream 39630 5479674 ~ 5502647 (-)
kcnk3a kcnk3,kcnk3a,LOC107562302,LOC107685790,LOC107574791 coding downstream 111239 5416749 ~ 5431038 (-)
ints7 ints7,LOC107685756,LOC107659878 coding downstream 157097 5375953 ~ 5385180 (-)
trnal-caa_2 NA coding upstream 902 5543290 ~ 5543401 (-)
trnal-caa_3 NA coding upstream 1918 5544306 ~ 5544417 (-)
trnal-caa_4 NA coding upstream 2934 5545322 ~ 5545433 (-)
trnal-caa_5 NA coding upstream 4961 5547349 ~ 5547460 (-)
trnal-caa_6 NA coding upstream 7966 5550354 ~ 5550465 (-)
G136188 NA non-coding downstream 422511 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 445216 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 508473 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 523411 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 805471 4736549 ~ 4736806 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 109911 5652299 ~ 5652925 (-)
G136356 NA non-coding upstream 158793 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 317565 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 506580 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 586110 6128498 ~ 6145661 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 182208 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 512710 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 529697 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 960180 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 1567019 3968763 ~ 3975258 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 48950 5591338 ~ 5598666 (-)
G136357 NA other upstream 159291 5701679 ~ 5703911 (-)
zpax2 NA other upstream 381678 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 732366 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 868574 6410962 ~ 6414013 (-)

Expression


Co-expression Network