trnal-caa_2


Basic Information

Item Value
gene id trnal-caa_2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5543290 ~ 5543401 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2446
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2446 True 84 tRNA 0.54 2 5543290 5543401

Neighbor

gene id symbol gene type direction distance location
trnal-caa_1 NA coding downstream 902 5542277 ~ 5542388 (-)
tagapb tagapb,LOC107685761,LOC107745285,LOC107733310,LOC107667698,LOC107549517,LOC107562296 coding downstream 5914 5520146 ~ 5537376 (-)
rsph3 rsph3,LOC107562297 coding downstream 29250 5504256 ~ 5514040 (-)
LOC122324477 ezrb,ezr,LOC107685759,LOC107745284,LOC107549516,LOC107733309,LOC107659875,LOC106607585 coding downstream 40643 5479674 ~ 5502647 (-)
kcnk3a kcnk3,kcnk3a,LOC107562302,LOC107685790,LOC107574791 coding downstream 112252 5416749 ~ 5431038 (-)
trnal-caa_3 NA coding upstream 905 5544306 ~ 5544417 (-)
trnal-caa_4 NA coding upstream 1921 5545322 ~ 5545433 (-)
trnal-caa_5 NA coding upstream 3948 5547349 ~ 5547460 (-)
trnal-caa_6 NA coding upstream 6953 5550354 ~ 5550465 (-)
trnal-caa_7 NA coding upstream 7458 5550859 ~ 5550970 (-)
G136188 NA non-coding downstream 423524 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 446229 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 509486 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 524424 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 806484 4736549 ~ 4736806 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 108898 5652299 ~ 5652925 (-)
G136356 NA non-coding upstream 157780 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 316552 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 505567 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 585097 6128498 ~ 6145661 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 183221 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 513723 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 530710 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 961193 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 1568032 3968763 ~ 3975258 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 47937 5591338 ~ 5598666 (-)
G136357 NA other upstream 158278 5701679 ~ 5703911 (-)
zpax2 NA other upstream 380665 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 731353 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 867561 6410962 ~ 6414013 (-)

Expression


Co-expression Network