trnal-caa_16


Basic Information

Item Value
gene id trnal-caa_16
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5558276 ~ 5558387 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2460
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2460 True 84 tRNA 0.54 2 5558276 5558387

Neighbor

gene id symbol gene type direction distance location
trnal-caa_15 NA coding downstream 865 5557300 ~ 5557411 (-)
trnal-caa_14 NA coding downstream 2345 5555820 ~ 5555931 (-)
trnal-caa_13 NA coding downstream 3830 5554335 ~ 5554446 (-)
trnal-caa_12 NA coding downstream 4808 5553357 ~ 5553468 (-)
trnal-caa_11 NA coding downstream 5076 5553089 ~ 5553200 (-)
trnal-uaa_29 NA coding upstream 730 5559117 ~ 5559228 (-)
trnal-caa_17 NA coding upstream 1610 5559997 ~ 5560108 (-)
trnal-caa_18 NA coding upstream 2080 5560467 ~ 5560578 (-)
trnal-caa_19 NA coding upstream 5449 5563836 ~ 5563946 (-)
trnal-caa_20 NA coding upstream 7911 5566298 ~ 5566409 (-)
G136188 NA non-coding downstream 438510 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 461215 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 524472 5033599 ~ 5033804 (-)
G136175 NA non-coding downstream 539410 5018361 ~ 5018866 (-)
G136069 NA non-coding downstream 821470 4736549 ~ 4736806 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding upstream 93912 5652299 ~ 5652925 (-)
G136356 NA non-coding upstream 142794 5701181 ~ 5701475 (-)
G136368 NA non-coding upstream 301566 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 490581 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 570111 6128498 ~ 6145661 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 198207 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 528709 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 545696 5011381 ~ 5012580 (-)
LOC122324820 ccdc85cb,LOC107678669,LOC107747948,LOC107572128,LOC107555299,LOC107740595,LOC107751728,LOC107668618,LOC105902331 other downstream 976179 4564356 ~ 4582097 (-)
LOC122325550 NA other downstream 1583018 3968763 ~ 3975258 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other upstream 32951 5591338 ~ 5598666 (-)
G136357 NA other upstream 143292 5701679 ~ 5703911 (-)
zpax2 NA other upstream 365679 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 716367 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 852575 6410962 ~ 6414013 (-)

Expression


Co-expression Network