CI01000001_12486765_12495297 (DCJ11, DNAJC11A, DNAJC11)


Basic Information

Item Value
gene id CI01000001_12486765_12495297
gene name DCJ11, DNAJC11A, DNAJC11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12485546 ~ 12495518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_12486765_12495297.mRNA
TAATAAAAACACACTCAAGATATACTTGGACAGAGCACACATTGCAAACAAAGGGCTTGTCCCAATGCCCATACTTGCCTTGTCCACTTGAGATCGTGCGCATGTGACAGAAAGTTAGTGTGCAAAACTGTCCAGGGTCTGAAATATGCCAAAGCTTTTTGCCCTTAATGCACACTAAATCCAGACTACCTCATCAGAGCAGTCCTCGGCCTGCCCCAATACACACACACTTACAGTCTTGGTCACTTGAGAGAGCGTGTGTATGTAACAGGAAGTTAGTGTGCGAGACAGTAGAGGGTTTTAGTAGAAATTTGCAGTGCCTTTAATGCACACTAAATCCACACTATAGCTAATACCTCACCAGAGCAGTATTGGTCCTGTCCCAATATTGCATTCTTGACCTCTTGAGAGCACATGTATACATGCAACAGGAAATAAGTGACTGAAAAATGCCAAAGAGTAGTACACTTAGCGCACACCAAATAAACACTAACTCTAATACTGCTTCGGAGAGGTATTTGAGGCGCATCCCATCATTCATCACGTTCAGAAGTGCCTCAGTTTTGCGTCATGTCTCGGAAAACCTTCCAGTGTAAGTTAAATTAATTAGATGTCACATATAATTTGGTTGTAAAATGTTTTATTGGTGCAGAGATTGTATTTTGTAAAACTTTTGCAAATGAAGCACCACAAGCATGCACTGGTTAAGTGTGTCCCATTGAGTAATCAAAAGTCTTAAAACACTTGCAGTCTTCACACCCACTTTGGCCAAACTCTGGGTTATGCTTCATGTAAGTAAATGGTCAAGTGCAGGGAATGCAAGTGTGGGTATTGGGACAGGCCCATCATTTATCAAGGTCAGGAAGTTACGTGCACTGAAATCACACAATGTCAAGGAAAACTTTACAGTGTAGATGAAAATGAATTTTGTAGTAAAATGTGAAGCGTTGCATATTTTATTGGTACAGAGATGCGTAGGCCCATGTGTACTTTATAAAACTGTGTTTCTTCCGTTTGAGAAGCACCCCACAAGTGTGGGTATTATACATATCTATGATTTGGAGTTGGACAGTCCCAAAGTAGTCACCCCGACAGCCTTTTGGTCAGTGTTCCTCCCATCCTGAGGGGGGCGCTAAAGACTTTCATGCACTCCGACTCTACACACCAAAGATCAGCGTAGTTTGATCGGGCGCTGGGGCGGGGATGAAAGGTGGAAAACATGGCGGCGGCCTTGGAAGAAGATGAAATCGATAATGATGACTATTATTCTTTGTTAAACGTCCGCAGAGAGGCCACACAGGACGAGCTCAAGGCTTCATATCGCCGACTTTGCATGCTCTACCACCCAGACAAGCACAGAGATCCAGAGCTTAAGAGGCAGGCAGAGCAGCTTTTTAACTTGGTGCACCAGGCATATGAAGTACTAAGCGACCCACAATCTAGAGCAATCTATGACATATATGGGAAGAGAGGCCTGGATGTGGAAGGATGGGAGGTAGTAGAGAGGAAAAGAACGCCAGCAGAGATACGTGAAGAGTATGAGCGACTTCAAAGAGAGAGAGAGGAGAGAAGACTACAGCAAAGGACCAACCCTAAGGGGACAATAAGCGTGGGTATTGATGCGACAGACCTCTTTGATCACTACGAGGAGGATTATGAAGAGCTCTCTGGTGGTGGTGGCGGCGGCTTGCCGCACATTGAGATCAACAGGATGCACATATCTCAGTCCATAGAGGCCCCTCTGACAACCTCAGACACAGCCATTCTTTCTGGCTCTCTCTCCACACACAATGGCAACGGGGGAGGAAACGTAAACTTGGCCTTGCGAAGAGTTACCTCGGCTAAGGGGTGGGGAGAGGTTGAGTTTGGGGCAGGAGACACACATGGCCCTCTCCTCGGGTTAAAGATTTTCCGTAACTTGACTTCACGCTGCTTTACAACAGCTCATTGTGGCATGCAGTTTTCATCCCGTGGTATACGGCCGGGTCTCACTACTATGCTTGCACGCCACCTGGACAAAAACACTATGGGTTATTTACAGTGGCGATGGGGAACTCAGTCTTCCATGAATACCAGCATCGTCAGGGACACCAAAAGCAGCCATTTCACCTTTGCTGTGCAGCCTGTCAATCTAAACAGCACTTGTGTTGCAGGTCAGGGTTTTTCGGTACGGTGGTGGAATACGGTGCCGAGACTAAGATCAGCAGGCACAGTGTCCTGGGTGCTACTGTTGAACCGAGCGAGTCAGACGTACTTCTTCCCCATTCACTTAACAGACCAGCTTCTACCCAGCGCCGTGTTTTATGCCACTGTCGGACCCCTTGTGTTCTACTTGGCCATCCAGCGGCTGGTTATCAGACCTTATGTTCGTGCTCAGCAGGAACAGGATCTTGAGAAGCAGCGGGAGAGCTCGGCATCAGACGTCGCCAAGAAAAAGCAAGAGGCAGAAGCAGCTGTTCTGCTGATGCAAGAGTCGGTGCGTAGAATTATCGAAGCAGAGGAGTCCAGAATGGGTCTGATCATCCTCAATGCCTGGTATGGCAAGTTTGTGACAGACAACAGCCGTAAACACGAAAGGGCAAGGGTCATTGATGTCACGGTGCCTCTACAGTGCCTGGTGAAGGACTCGAAGCTCATTCTCACAGAAGCCTCTAAGGCTGGTTTACCAGGCTTCTACGACCCCTGTGTAGGTGAGGAAAAGAGTCTGAAGATGCTGTATCAGTTCAGAGGTGTGATGCACCAAGTTCTATGTGGTGACACAGAAGCACTCAGGATACCAAAACAATCCCACAGGATTGATAATGACAGTTAGGAACATGTATCTCTTGAGCTAAAAGGGACAGCTTGGACTGGTATAGACTGATGAGACACAGATGTTCTGGAGTAGTGCCCTGGAAAGCACTCTGTGCCCTTAAAAGTCTTCATATACCTATTTATCCTTTATTTTGTTCTGTTTTAAATATTATTCTACATGATGTCTGTTTGAAAATTAGAACATTTAATTGGAACGTTTAATTTGCTGGATTTCCACTA

Function

symbol description
dnajc11a Predicted to be involved in cristae formation. Orthologous to human DNAJC11 (DnaJ heat shock protein family (Hsp40) member C11).
dnajc11 Involved in cristae formation. Located in mitochondrial outer membrane and nuclear speck. Part of MIB complex. Colocalizes with MICOS complex and SAM complex.

GO: NA

KEGG:

id description
K09531 DNAJC11; DnaJ homolog subfamily C member 11

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_12486765_12495297.mRNA True 3033 mRNA 0.46 15 12485546 12495518

Neighbor

gene id symbol gene type direction distance location
CI01000001_12280407_12327837 NA coding upstream 157592 12278771 ~ 12327954 (+)
CI01000001_12088244_12091260 NA coding upstream 394052 12088167 ~ 12091494 (+)
CI01000001_12058281_12060612 NA coding upstream 424285 12057755 ~ 12061261 (+)
CI01000001_12006266_12048809 DVL1A, DVL1B, DVL1 coding upstream 436501 12005928 ~ 12049045 (+)
CI01000001_11994138_12003906 NA coding upstream 481446 11994138 ~ 12004100 (+)
CI01000001_12503839_12514653 ASXL1 coding downstream 8010 12503528 ~ 12515328 (+)
CI01000001_12556923_12557900 NPBWR2 coding downstream 60665 12556183 ~ 12558099 (+)
CI01000001_12568625_12571184 NA coding downstream 73016 12568534 ~ 12571943 (+)
CI01000001_12580225_12599311 NA coding downstream 84456 12579974 ~ 12599587 (+)
CI01000001_12602382_12613489 CABLES2A coding downstream 106443 12601961 ~ 12613938 (+)
G19538 NA non-coding upstream 4141 12109563 ~ 12481405 (+)
G19621 NA non-coding upstream 116516 12305013 ~ 12369030 (+)
G19548 NA non-coding upstream 341404 12143620 ~ 12144142 (+)
G19473 NA non-coding upstream 429948 12054928 ~ 12055598 (+)
G19512 NA non-coding upstream 493171 11992032 ~ 11992375 (+)
G19673 NA non-coding downstream 27155 12522673 ~ 12538554 (+)
G19697 NA non-coding downstream 50432 12545950 ~ 12546380 (+)
G19702 NA non-coding downstream 56509 12552027 ~ 12552458 (+)
G19704 NA non-coding downstream 59581 12555099 ~ 12555464 (+)
G19717 NA non-coding downstream 81687 12577205 ~ 12577419 (+)
G19395 NA other upstream 803729 11681322 ~ 11681817 (+)
G19314 NA other upstream 926873 11501194 ~ 11558673 (+)
G19039 NA other upstream 1631563 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 1945700 10538388 ~ 10539846 (+)
G18937 NA other upstream 2009157 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 1017886 13514115 ~ 13517063 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021775 dnajc11a coding NC_007134.7 CM002907.2 30707837 ~ 30724909 (+)