trnal-caa_43


Basic Information

Item Value
gene id trnal-caa_43
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5815950 ~ 5816061 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2493
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2493 True 84 tRNA 0.54 2 5815950 5816061

Neighbor

gene id symbol gene type direction distance location
trnal-caa_42 NA coding downstream 1915 5813924 ~ 5814035 (-)
trnal-caa_41 NA coding downstream 2931 5812908 ~ 5813019 (-)
trnal-caa_40 NA coding downstream 4453 5811386 ~ 5811497 (-)
trnal-caa_39 NA coding downstream 5468 5810371 ~ 5810482 (-)
trnal-caa_38 NA coding downstream 6991 5808848 ~ 5808959 (-)
trnal-uaa_34 NA coding upstream 1421 5817482 ~ 5817592 (-)
trnal-caa_44 NA coding upstream 1930 5817991 ~ 5818102 (-)
trnal-caa_45 NA coding upstream 4463 5820524 ~ 5820635 (-)
trnal-caa_46 NA coding upstream 4969 5821030 ~ 5821141 (-)
trnal-uaa_35 NA coding upstream 5476 5821537 ~ 5821648 (-)
G136356 NA non-coding downstream 114475 5701181 ~ 5701475 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding downstream 163025 5652299 ~ 5652925 (-)
G136188 NA non-coding downstream 696184 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 718889 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 782146 5033599 ~ 5033804 (-)
G136368 NA non-coding upstream 43892 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 232907 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 312437 6128498 ~ 6145661 (-)
G136416 NA non-coding upstream 389029 6205090 ~ 6205438 (-)
G136440 NA non-coding upstream 430202 6246263 ~ 6246891 (-)
G136357 NA other downstream 112039 5701679 ~ 5703911 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other downstream 217284 5591338 ~ 5598666 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 455881 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 786383 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 803370 5011381 ~ 5012580 (-)
zpax2 NA other upstream 108005 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 458693 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 594901 6410962 ~ 6414013 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other upstream 616701 6432762 ~ 6451499 (-)
G136688 NA other upstream 1309687 7125748 ~ 7228963 (-)

Expression


Co-expression Network