trnal-caa_48


Basic Information

Item Value
gene id trnal-caa_48
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5823064 ~ 5823175 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2500
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2500 True 84 tRNA 0.54 2 5823064 5823175

Neighbor

gene id symbol gene type direction distance location
trnal-caa_47 NA coding downstream 396 5822557 ~ 5822668 (-)
trnal-uaa_35 NA coding downstream 1416 5821537 ~ 5821648 (-)
trnal-caa_46 NA coding downstream 1923 5821030 ~ 5821141 (-)
trnal-caa_45 NA coding downstream 2429 5820524 ~ 5820635 (-)
trnal-caa_44 NA coding downstream 4962 5817991 ~ 5818102 (-)
trnal-caa_49 NA coding upstream 905 5824080 ~ 5824191 (-)
trnal-caa_50 NA coding upstream 1413 5824588 ~ 5824699 (-)
trnal-caa_51 NA coding upstream 2429 5825604 ~ 5825715 (-)
trnal-caa_52 NA coding upstream 2937 5826112 ~ 5826223 (-)
trnal-caa_53 NA coding upstream 3445 5826620 ~ 5826731 (-)
G136356 NA non-coding downstream 121589 5701181 ~ 5701475 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding downstream 170139 5652299 ~ 5652925 (-)
G136188 NA non-coding downstream 703298 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 726003 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 789260 5033599 ~ 5033804 (-)
G136368 NA non-coding upstream 36778 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 225793 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 305323 6128498 ~ 6145661 (-)
G136416 NA non-coding upstream 381915 6205090 ~ 6205438 (-)
G136440 NA non-coding upstream 423088 6246263 ~ 6246891 (-)
G136357 NA other downstream 119153 5701679 ~ 5703911 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other downstream 224398 5591338 ~ 5598666 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 462995 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 793497 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 810484 5011381 ~ 5012580 (-)
zpax2 NA other upstream 100891 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 451579 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 587787 6410962 ~ 6414013 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other upstream 609587 6432762 ~ 6451499 (-)
G136688 NA other upstream 1302573 7125748 ~ 7228963 (-)

Expression


Co-expression Network