trnal-caa_53


Basic Information

Item Value
gene id trnal-caa_53
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 5826620 ~ 5826731 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2505
gtcagaatggccgagtggtctaaggcgccagactcaagttctggtctccaaatggaggcgtgggttcaaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2505 True 84 tRNA 0.54 2 5826620 5826731

Neighbor

gene id symbol gene type direction distance location
trnal-caa_52 NA coding downstream 397 5826112 ~ 5826223 (-)
trnal-caa_51 NA coding downstream 905 5825604 ~ 5825715 (-)
trnal-caa_50 NA coding downstream 1921 5824588 ~ 5824699 (-)
trnal-caa_49 NA coding downstream 2429 5824080 ~ 5824191 (-)
trnal-caa_48 NA coding downstream 3445 5823064 ~ 5823175 (-)
si:ch211-22i13.2 NA coding upstream 62750 5889481 ~ 5893291 (-)
rhag rhag,LOC107751290,LOC107685767,LOC107562311,LOC107549521,LOC107712421,LOC107695981 coding upstream 66701 5893432 ~ 5904235 (-)
LOC122324731 LOC107685784,LOC108426288,LOC102776492,LOC101474482 coding upstream 107766 5934497 ~ 6031008 (-)
grcc10 grcc10,cssa15h12orf57,clg18h12orf57,c7h12orf57,LOC107685770,LOC107695984,LOC105901913,LOC107729086,LOC102199733 coding upstream 216633 6043364 ~ 6046192 (-)
ylpm1 ylpm1,LOC107729078,LOC107685771,LOC107695985 coding upstream 227790 6054521 ~ 6075953 (-)
G136356 NA non-coding downstream 125145 5701181 ~ 5701475 (-)
G136350 LOC107746236,LOC107672706,LOC107741192,LOC107663224,LOC107557109 non-coding downstream 173695 5652299 ~ 5652925 (-)
G136188 NA non-coding downstream 706854 5112173 ~ 5119766 (-)
G136180 NA non-coding downstream 729559 5091300 ~ 5097061 (-)
G136176 NA non-coding downstream 792816 5033599 ~ 5033804 (-)
G136368 NA non-coding upstream 33222 5859953 ~ 5860623 (-)
G136388 LOC107685791,LOC107582172,LOC107712426 non-coding upstream 222237 6048968 ~ 6050633 (-)
G136398 LOC107685776,LOC107712433,LOC107582143 non-coding upstream 301767 6128498 ~ 6145661 (-)
G136416 NA non-coding upstream 378359 6205090 ~ 6205438 (-)
G136440 NA non-coding upstream 419532 6246263 ~ 6246891 (-)
G136357 NA other downstream 122709 5701679 ~ 5703911 (-)
LOC122324832 enpp1,LOC107745282,LOC107685780,LOC107562320,LOC107733306 other downstream 227954 5591338 ~ 5598666 (-)
LOC122324433 LOC107727350,LOC107558762,LOC101885478,LOC106571404,LOC103026919,LOC106607809,LOC105897019 other downstream 466551 5161206 ~ 5360069 (-)
selenol sell,LOC107679675,LOC107558766,LOC107742218,LOC107742854 other downstream 797053 5024806 ~ 5029567 (-)
si:ch73-111k22.3 LOC107742221 other downstream 814040 5011381 ~ 5012580 (-)
zpax2 NA other upstream 97335 5924066 ~ 5931122 (-)
G136460 LOC107582106,LOC107740299,LOC107664831,LOC107668145,LOC107549511 other upstream 448023 6274754 ~ 6302976 (-)
si:dkey-63b1.1 si:dkey-63b1.1,LOC107668138,LOC107747376,LOC107740302,LOC107582148,LOC107664798,LOC107549507 other upstream 584231 6410962 ~ 6414013 (-)
LOC122324366 LOC107549545,LOC107582175,LOC108413331,LOC105929849 other upstream 606031 6432762 ~ 6451499 (-)
G136688 NA other upstream 1299017 7125748 ~ 7228963 (-)

Expression


Co-expression Network