G142729 (LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962)


Basic Information

Item Value
gene id G142729
gene name LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 431624 ~ 434122 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210850
ttttaatttaaatctcaTACATAAAGCAGTAAGAATTCATattatctctctttttaaaGAGGGTTTTAAAGCAAAGATTCACAGAGAATAATTTATACACATATTAGAAGGATATACAGtccataatttataataatctCCTTGGCCTCAACATACccacattaacacattaatataACACGCACATGAAAAACATCACTGTTTTAACATTACAGATGTCAAATTCGACGCTAATGCTGATCAGAATTGGTACTGAGTCTGGTGtattatcttaaaatatgtatCTCATTAAATACGATTGGACTGTAATACATTCATAAGGTAAAAGAGCGTTGACGTTTCAGCACAACACTATCATCGGGATATCAAACTCCGCTGGACATTTGCAGGTTTATTTGTGTGCATCTGAATGCATGTAGACGTGCTTTCGGAATAAAGACATAACCGGCACACACATCTGTAAAATATACGGGATAAAACTcgtttttaaacatattaaaatatatccgTTTGGTCCTTTAATTTATTATGCTACATGTACACTGACTAAACTGAAGATAGAGAGTTGCTGTCAGCGAGGGGTGAGAAAATTGCGAATGGAAGAACGATTGCTGCTGGTTTCAATGTCGCTGTCTCCGGAGCCCACTTCATTACCTGTCGcacaataataatcaataacaTATTTTGCATGACACTTCGATCAAAAAGCGTGTTTTGAATCGTTTTTTCGAGGGCTTCGGTAAACTCTAAACTCACCTTCACTTGAGTGAGATTTCAGCATGGCCATTTTAGCCAGGAATTTAAAGGAGAGACAAGCACCTGTTTCCCTGTCGCACAGTCCTCCTGCTTTACAGTTGCACGTTTTCCGACATTCCATGCCGTACGTTCCATACATGCAGTCTTGTAGAAGTCGCAGAAGAGTCCCGGTCCGCACTTGACGCCGTGCATCCCGGACACGGTGCGGTAGCAGTGCTCTCCCCGTCCCGCGGCGCAGAGCTGGCAGCATCCGCAGTCGTCCAGCACCGTGCGCCTGCAGCGCTGCGTCGAGCCGCACAGCGCGGGGCTGCATCTGTCCGGGCAGCTGACGGCGTATTTACCCGCGGGACCCCACGCGTCGGCGTCTCCGAGCGCCATCAGCAGCAACACCGGGATCGCGTACGAACGCATGGCTTGAAGTGCGAACGAACACCACGCTGGACGCTGTCCTCGGGTCTAGCGCGCTGGGGAGGAGCTGTCCCCTTCTTAGACGAGA

Function

NR:

description
PREDICTED: endothelial cell-specific molecule 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210850 True 1252 lncRNA 0.45 2 431624 434122

Neighbor

gene id symbol gene type direction distance location
mapk10 mapk10,LOC107749009,LOC107662288,LOC108278438,LOC102308224 coding upstream 107864 263512 ~ 323760 (+)
LOC122326942 NA coding upstream 341387 88162 ~ 90237 (+)
LOC122326268 herc1,LOC107701925,LOC108436580 coding downstream 3652 437774 ~ 495164 (+)
ccbe1 ccbe1,LOC107662219,LOC107701959,LOC107584559,LOC107719070,LOC107600894,LOC107739739 coding downstream 242744 676866 ~ 723059 (+)
lman1 lman1,LOC107662211,LOC107739740,LOC107701961,LOC107719069 coding downstream 296670 730792 ~ 742946 (+)
cplx4a cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741,LOC107701934 coding downstream 312120 746242 ~ 750644 (+)
rx3 rax,rx3,LOC107739660,LOC107719081,LOC107584557 coding downstream 318698 752820 ~ 755652 (+)
G142672 NA non-coding upstream 228449 202787 ~ 203175 (+)
G142658 NA non-coding upstream 235422 182416 ~ 196202 (+)
LOC122326263 NA non-coding upstream 251575 172944 ~ 180049 (+)
G142807 NA non-coding downstream 292136 726258 ~ 726592 (+)
G142832 NA non-coding downstream 325153 759275 ~ 812057 (+)
G142866 NA non-coding downstream 482499 916621 ~ 916963 (+)
LOC122326171 NA non-coding downstream 614256 1048378 ~ 1081301 (+)
G142941 NA non-coding downstream 638146 1072268 ~ 1074041 (+)
alpk2 LOC107600938,LOC107662700 other downstream 301600 735722 ~ 806106 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other downstream 616716 1050838 ~ 1055925 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 718982 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 793876 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 1595982 2030104 ~ 2056679 (+)

Expression


Co-expression Network