alpk2 (LOC107600938,LOC107662700)


Basic Information

Item Value
gene id alpk2
gene name LOC107600938,LOC107662700
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 735722 ~ 806106 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210980
tatatgtatatgtgtatatatatatatatatatatatatatatgtatgtatttaatattttaatgtatttaaatatataaaaatattaaatgtgtatattaaatgtgtacatgcatgcttaataataataaaaatacaaaaataagcatttaaatatttcaaataaaaactgcGTAGcattaattcagatttttatgaTTGCAGCTATAAGGGGTTCAGAGGAAACTGTGCCACGTCCTTCATCGATCAGTTCAAGGTTCTTCATCAGTGTAACAGGTACTGTGAGATTCTGGGCCTGACGTCTCTTCAGCCCAAGCCCAAACGGACCGTCGGCCCGCCAAAGCCAAAAACACAGCCCGCACCCAAGAAAAAAACCTTCGGCCCCGTTCTGAAGGGCAAATCCTGATGTCTTCTTGTAGGACGTTGGCCGTTTTCTTGCTCAGGGACAAATGTGTTTCTgagatgtttctttaaaagtaaGATGACATTCATCTGTAAGGACAGTAGGGAGGTTACTTCTTTCTTGAGAGCTCTCTTGCGCTATTATAAATgagcttattatttttatttcattttgtatgtatattttttttaaggggcGAGTTGACTTTGAATCGATGCAATGCTTtttcaatgtaatatttttagtgtAAACCAAGGAAATATCAGCTACAGTATTTTCTCctggtttgttttgttgagAAGTCGTGCCTGTGGTGCTTCCGTCTGATTCTTTAATATTAGCCTGCTGACGCTACTTAtgattgtttattataatatgtgCAATAAGTACTTAGTTCATCAAACTGCTCAATCTTAAACAGACATGTACTTTACGAGTGATATTAACGTACCGCTTCTCATTTTCAacgttaaaatactttttcacgCGCATTTTTAAcgagtttaatatttattttttggtgaattatgGATTTGTTAAAGTTCATCCGCTCTGTTTCTGGGAAGGAAGGACGAGGTGGTAAATCTGATACTATGGAAAGATTTGTACACTTGCCCTAGTAAACAGCTGTTGATTTGCCTCAGTAAGAATGACAATCCTCCACCTTCACGTTTCCATCATCCTCCTAAAGTCAAATGACTTATTGCTTCATTGCTATATATAAGCACACGCGTTTCAAGCGTTTGTCCTGTTCAAGTTAACGAACGGCACAAATCAATCACCTGAAATTAAAAACTGTGATCGTACTGTAGCTGCTTTCTGCCAATCTAGTCTTATCTATTTGTAGTCTTAGTGATCGTGGATTGAAGGTCGAAGGTTATCAGTTTCTTGGCTTCACTGAACTGCAATACACTTGTATTGGGTTTGAATGGTATATTGTGTAttacgtttttttctttttctttatatgttatgttgtgtattaacaagtagttttttttttcctttgagtCGTCTGGGCTTTAATTtaatcacaaacaaaaaaaaaaaaaaatttatttattttattttgtttataaatgttatatataacaatacatttaacaataattaaattatacattttatgaaaacttattttagaatatcatattttttaaatgacatgtaATTTAGCTTTTGCAGTCTAGAGAGAAATCAGAC
>XM_043221343.1
TACGTGAACCTCATATTCTCCAGACCTACATCACCACTGAGTGTATTTGCCCAtttggatgtaaaaaaaaaaAGGGATCTGATGCTGAACGCTGGCTTCTTTAGGAGTGAGATCTTTGGACTTGGTCTCTCATGACAGATGCCCAAACTGAGGCAGTGACGTGTGTGCAGCGATCCATAGAGAAGGAGATGACAGCTGAGCGGGTTGACATGGCCACCCCAGACAATCTGCTGTTCCTGGACACAGATGCTGTCAACTCTTCCTTCGCTTCACCGCCCATAGAGCGAAATGAGCCCGCTCGTGCCACGGACAACCAGACAGACGACAGCTTTAGTTCAGTCCCTGATCAACACCCTGATCCAGACTCAGGAAGCTCAGGATTAATGCCTGTTCCGTGCCAGGATGGGACCACTGAAATCCATAATACAAACATTGAAAAGGAAAATGAGAGTGGTTTAGTCTTAACACAGCCCCTGGATCACACCGAAAGgatagaaatgacaaaaaatactgCTGCTGTGATGGAGAATAACAGTATCACAAACAGTACTAATATCCCTAGCCTAGTTCAACTACTGCATGGAAGTCAAAATGACTTCCATGGTAACTCAAACATTAAAGAGGATTCAAATGAGGCTCATGGCATTTTAATGAGTTCATTAATAAGAGAACACAACAGACAAGAAGAAATGAGCCAAGACACCATTTTAAACCAATATGCCTCCTTTGAGAACCCTGGGCTTGATGTTAACCCAGTTGCTAATGATGAAGATTCCTTAGTAAATACTGTCTCTAATGTAATGAACGGTGCAAGCAATGAGACCGATGCGAGTTCTTCTGAAACCCTCACCCAGGATACATCTGAAGGTGTTGATATAGCAGTGGAAGCTGTGACTGCCTATAAAACTCATTCAGAAATACATGACATTGTAGAGGACTTGACATGTTGTGGCTTTacaacctctcagatacagaagAGAGAAGATCAACAGACTGGCGTTCATCTATGTTTGGCTGATTTGCATGAAGCAGACACTCTAAACATCTTAAAAGATGCCTCCGaagtaatagatttttttgggtTAAACAAAACTGTCTTGGAAACAGCTGACTGGCTGGTCAATGACAGTGAGATCATTCAGACTGCAAATCAAGACTTGGTCTCCTCAAATGTTGAGTTTTGCACCGCTGCTTTAACCCAAACGGTTCCAAATCTTCTACAGGGTTCAGAACATGTAATGGAATCAGAATCCAACAGAACTGAAGATTCCATGCTCGACAGAACGATTGAAACAAAATTCCCATTGGATATTAGTTGGGTGCAACCGTTGACATCTGAGACAACTGAGTCACTTTTCCACCAATCCATGCTTAGAACCTCACAAATTGGTGGAAAACATGAGAAGGATCTCTCACAAATGATCCCTTACCCAACACCTGTCATGAATAAAGATTTAGGGAAATGTTCTGAGGAGATCGATGGTGCTTGCTTAAAGTTCACAAGAACGGAACGTGATGTTGAGGCTGGTAGCGAGTTGTGGCTGGACGCTTGCCAGTTCTTGGCAGGTGAAGAGGTTGACGGTGCTATTTTTGACAAGTGGGGTCGTTCCTGTCCTCCCAGCCCCACCACAGCCCattcagacaaaacaaaagcctCGGATTACTCCAGGAGAGAGAACATTTCAATTGACCACCACAGTGAAGACTGGGAGCTGAGGTTTCCACCTGTTGAGAGGTGGTCGTCCTCGGACAGCTGGGCTAGTGCACTGTCAGACTGGTTCCAGGCAGTTAACACCTATTCAGAAGACTCTTTTACCAGCGCTAGCACATCGAGCACTGGTCCTAAGCACACTATGGCAATCCAAGACAACATTTTGGAGCATCCTGATAATGCAAACATCACTGGACAGACAAGTCTGAACCTCTCAGAACCAGAAGAAGCAGGTCAGCCCTTGAGTAGAGGACTAGTTGAGTCTGATAACACTAATGGAACTCTTTTTAAACAAGCTGATAAACAAGCTGATGAAGATAGACTTCCTTCTCATtcagactcagacagacaggaTGATAAAACGACAGAGAACGGCACGAGTTTGTCGGAGAGGTCTGAATCCAATAAACCAGATGCAGCCATGCATATGCTTAATGCAACAAAATATCCTAAAAATGAGGCCAGTGACAAACTTCATGGAAATCAGCAAAACCCTGGAGAGCTTTGGAGTACAAAGcCTGAAGGAAATGAACTGGTAGAGGTGACCGGTGACAGAGTTTCCCAACTCGGGTTGGCCTTTGAGGAGGAATGTCAAAGCAGTTTTACTTCTCAAAGGATCTACACCGGCGATAAGAATTTAAGTGACTGTGTGAGCGGTGAGGAGTGGTGTCACGGCTTCGATGTTGCTCTTCACACATGTCCCTCTCAATCGAACCGTCACGCGTCTTCTGAGGCGGGAAGTGCCGAAGGAAATGAAACGTTTGTGCATTTTACCACTGAGGAAAGCGGCGTGAAGCCAAAGGGGGAggaaaaaagtacatttccaCAGTTTATTATGCCGCTTGCTCCACTCAACACTTTTCTCCATAGTAGTTTATTGAAAAGTTCACAGGATGATCTAGATTTTCCACCTAAAGGGATTATTAATGAGACGTGCCTTAAGAGTGATCAAAAATCAGTCAGTAGTGACGATTCATCTGAAGATCTCTTTCATACATGTCCTGACCAGTCTTTATCTTCATCCAGTGGAGATTCAGATGATCCTTCTATCAAGGacactaaaagaaaaacagagtaCAGTGATGCCTGCGACATCAGCAAAGAGCTTTCAAAGTTAATTTTACTCACAGGACAGCATTTTATGGTGTCTGAAGACAAACATGTTGCATATGTCACTCTAGACTTGGAGGAACcaagtttaaataatttctcaTTGTCAAACTACGAGCAACGACCCAAAACAGACAATATGCCTCACAAGACTTTCAAAACTTCCTCAGATGGTAAAACACGCTCTAAACATAAGGAGAAACCAGCTGAGAAGCAGCAACATGGAATTCAGACAACAAAAAAGCAAGATCTTCAGCCCCCATCCCACATAAAAAAGGACTTAAATTCAGAAGGAGATGGTTGTGAAAACCGCCCAGTTACTGTTATTGAAACCATTGTCATCACAGAGAAGATCGCTCCTAAAACCCaagggaagaagaaaaagaagccCCCACAACATGGGACACCAAAACCTGAAAATGATCTACTGAGTGACAGAAGTGGCAAGACTGAGAACCATGACGTGAAGGTAGCATTAAATGGTCTAGATAAACCAGCATCTCATCTTCCCACCAAAGTGGACATTACTAACAAAGATAGCACTCAGAATGTCGTGTCAGTGAGACCCAAAGTAGAACCCAGTGGGAGTTTTGGTGCCAAGATGGATGCTGGCAATGTAAGTGCCACTCAGAAAGCCACCCCTATAAAACCTAAAGTAGATGCCAGTAACACAGCCAAGGTGGAAAATAAGACGTGCACTTCTGATTCTTCAAGCACGTGTTTACCCAGCATGTCGAATGATGATATCAAGCGCAGGCGGATCGCAGACGACCTGTCTGGAGCAGTTCCGATAAGAACGAGGCCACAGCTGCCCGCAATTTTCCGCCAAGCAAGAAAAGACGGAGAAGATGCGACCAGGAGAGCTTATAGTGAGGTTGTCAAGCAGAAGACTCCAATGCCCAAAGAAGTTGTGGTTCCTCGTGTAATCTCAGAGATCCAGGCTGACCCAGTCCCCGCTGACCCTCAGAACATCTTGCTTTGGTGCAAGTTCAGTCCCGTCCCAACTGATGCCACCATTAAGTGGACTAAAGAGGGAACAGTGCTGTCAGagataaacaaaatAGAGAAGGATGATGGCCGCTTCACTTTGACAATCCTAAAGGCTTGCAGTAAAGATTTAGGGCTGTATAAATGCAGCCTGAGTGCTGCCAACATTTCTGTTTCGACCTCAGAGTACCATCTCACGTCTGAGGtgctTATGGAACTAGTCATTCCGAGTCATGATCAGCCAGCTGAGCCCAGGGTTGTGGACGGCGATGAGGAGAACATCCAGTGCAGCCCGCTTCTCTTTAAGGAAGATTTTCTCTCAGATCAGTACTTCGGAGAGAATCACCCAGCGAGCATCGTGACCGAAAAGGTCCACTTCGGTGAAGGCATGCATCGCAAGGCTTTCAGGACCACTCTTAGAGAAGGCAATCTGCCGAGCTTCAACCCCGGCCATCCCTGCGTCCTGAAAGTACACAACGCCATCAGCTATGGGACCAAAAATAATGAGGAGCTTGTCCAGAAGAACTACAGCCTGGCGGTGGAGgAATGTCACGTGCAGAATACCGCCAGGGAATATATTAAAGCATACAATAGTGTGGCCAAGTCTGCAGAAGCATTTGGAGAGGTGCCAGAAATCATCCCTATTTATTTGGTGCACCGGCCATCTAATGACGTCCCTTACGCCACGCTGGAGGAGGAGCTGCTGGGAGATTTTGTGAAGTACTCTGTGAAGGACGGGAAGGAGATCAACTTGATGCGCAGAGACTCTGAGGCGGGACAGAAATGCTGTGCCTTCCAGCACTGGGTCTATACACAGACCGAAGGCAACCTGCTGGTCACCGATATGCAGGGTGTGGGGATGAAACTGACAGATGTTGGGATTGCCACCTGTAAAAAAGGCTATAAGGGGTTCAGAGGAAACTGTGCCACGTCCTTCATCGATCAGTTCAAGGTTCTTCATCAGTGTAACAGGTACTGTGAGATTCTGGGCCTGACGTCTCTTCAGCCCAAGCCCAAACGGACCGTCGGCCCGCCAAAGCCAAAAACACAGCCCGCACCCAAGAAAAAAACCTTCGGCCCCGTTCTGAAGGGCAAATCCTGATGTCTTCTTGTAGGACGTTGGCCGTTTTCTTGCTCAGGGACAAATGTGTTTCTgagatgtttctttaaaagtaaGATGACATTCATCTGTAAGGACAGTAGGGAGGTTACTTCTTTCTTGAGAGCTCTCTTGCGCTATTATAAATgagcttattatttttatttcattttgtatgtatattttttttaaggggcGAGTTGACTTTGAATCGATGCAATGCTTtttcaatgtaatatttttagtgtAAACCAAGGAAATATCAGCTACAGTATTTTCTCctggtttgttttgttgagAAGTCGTGCCTGTGGTGCTTCCGTCTGATTCTTTAATATTAGCCTGCTGACGCTACTTAtgattgtttattataatatgtgCAATAAGTACTTAGTTCATCAAACTGCTCAATCTTAAACAGACATGTACTTTACGAGTGATATTAACGTACCGCTTCTCATTTTCAacgttaaaatactttttcacgCGCATTTTTAAcgagtttaatatttattttttggtgaattatgGATTTGTTAAAGTTCATCCGCTCTGTTTCTGGGAAGGAAGGACGAGGTGGTAAATCTGATACTATGGAAAGATTTGTACACTTGCCCTAGTAAACAGCTGTTGATTTGCCTCAGTAAGAATGACAATCCTCCACCTTCACGTTTCCATCATCCTCCTAAAGTCAAATGACTTATTGCTTCATTGCTATATATAAGCACACGCGTTTCAAGCGTTTGTCCTGTTCAAGTTAACGAACGGCACAAATCAATCACCTGAAATTAAAAACTGTGATCGTACTGTAGCTGCTTTCTGCCAATCTAGTCTTATCTATTTGTAGTCTTAGTGATCGTGGATTGAAGGTCGAAGGTTATCAGTTTCTTGGCTTCACTGAACTGCAATACACTTGTATTGGGTTTGAATGGTATATTGTGTAttacgtttttttctttttctttatatgttatgttgtgtattaacaagtagttttttttttcctttgagtCGTCTGGGCTTTAATTtaat

Function

NR:

description
alpha-protein kinase 2

GO: NA

KEGG:

id description
K08868 ALPK; alpha-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
TU210980 False 1606 lncRNA 0.33 2 735722 806106
XM_043221343.1 True 5939 mRNA 0.44 12 793035 805935

Neighbor

gene id symbol gene type direction distance location
ccbe1 ccbe1,LOC107662219,LOC107701959,LOC107584559,LOC107719070,LOC107600894,LOC107739739 coding upstream 12663 676866 ~ 723059 (+)
LOC122326268 herc1,LOC107701925,LOC108436580 coding upstream 240558 437774 ~ 495164 (+)
mapk10 mapk10,LOC107749009,LOC107662288,LOC108278438,LOC102308224 coding upstream 411962 263512 ~ 323760 (+)
LOC122326942 NA coding upstream 645485 88162 ~ 90237 (+)
prlra LOC107662152,LOC107739665,LOC107600937,LOC107665241,LOC107584552 coding downstream 72123 878229 ~ 901350 (+)
agxt2 agxt2,LOC107662137,LOC107719064,LOC107739667,LOC102783298 coding downstream 95567 901673 ~ 915039 (+)
LOC122326806 LOC107719062 coding downstream 120252 926358 ~ 939559 (+)
arid6 LOC107739744,LOC107662105,LOC107600907,LOC107719083,LOC108436592 coding downstream 136747 942853 ~ 948284 (+)
gtf3c5 gtf3c5,LOC107600935,LOC107662094 coding downstream 179331 985437 ~ 990633 (+)
G142807 NA non-coding upstream 9130 726258 ~ 726592 (+)
G142729 LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962 non-coding upstream 301600 431624 ~ 434122 (+)
G142672 NA non-coding upstream 532547 202787 ~ 203175 (+)
G142658 NA non-coding upstream 539520 182416 ~ 196202 (+)
LOC122326263 NA non-coding upstream 555673 172944 ~ 180049 (+)
G142866 NA non-coding downstream 110515 916621 ~ 916963 (+)
LOC122326171 NA non-coding downstream 242272 1048378 ~ 1081301 (+)
G142941 NA non-coding downstream 266162 1072268 ~ 1074041 (+)
G142933 NA non-coding downstream 276061 1082167 ~ 1083273 (+)
G142954 NA non-coding downstream 284137 1090243 ~ 1102107 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other downstream 244732 1050838 ~ 1055925 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 346998 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 421892 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 1223998 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1427553 2233659 ~ 2237195 (+)

Expression


Co-expression Network