G142832


Basic Information

Item Value
gene id G142832
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 759275 ~ 812057 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU210993
tttatttatttatttattttttacttatttgtattttttttttattataagatTTTATAGATGCAAGCTTGCAATGTTTAAGCATGAGAGcagaaaatcaacaaaacaaagaagTCAACACAGCCTTGAACTAGATTACAAAGAGGGTTGCCAGATTTAACCCGGTTAGCCGTACCTGCAGCGTTGAAACCGGTCAAATCAACAGAACATATCTGTAAAAAGTAAACCCTCACAATAAAGCGAAACCCTGTCCTCCTGTTTGCTTGTTCTTCGACTTTCGGAACAATCcagtaaaatgataaaacacttctttatctttttatcaACCTTCGGGTTAAACTGAAACCCAGTGGTTGTATTTACAAACCCAACTGCCAACAGTCACAGAAGTAGAAATACCGTGAACGTGTTTACCTTGAAAGCAATCGGCTAAAACCCATCCGATACCACTTCAAATCCTATTTAGTTGATTTCCTGTCATTTGTTCCTAGTGTCAATAAAACAAACGCAGACTTTTCCTATAAATCAGTAAAACACCACCACACCTAAATTCCATTTATCAGTTTATTTCGAACGAAGTTATACGAATCGCAAGGTCTCGCGGTGAGCAGGAACCAGACAGTAAATGTTCCtcatcaataaaaaaagaactgccCCTACAAAAGAGGAAGggtaatttataacaataacaataatcataatattatcACCTACAGGGCCACAGCGGCCCGAAAAAAATGTGAGTGGGGAGGTGTACAGATAAAAGACCGAAAAAGAAAACGAGAACCAGTCTGAAGTCTGACTCCAGGTGGAGCAGATCCGGATTCACACTGACCAACCAAGACTGACTCCGGATCAGCTGCAGAGCCGAGCTGGGATCTGATATGTTAGCAGCAGGCCGATTATAAACGAGAGATATTGCACCAAGGAAACGAGtgcttttaaaagaacaaaatagaTAATCACATTcaagttcacaaaaaaaagaaaaaaagaaaaaaccaaacaaacaggTGACATGACCCTAGTGTGTGATCAATAAAGTGCCCTTTTAGGTAAAGTGGTGTTAGAAGAaacagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagagtttaCGTCCTGAAAGTCTACTAGACTTGCAGTGTTGAATCACAGCGCTTTTAAGATAGCTTCACTCTGTGTCGCTCTTTAATACTTTCAAACAGATTTAACACGTACAGTAAAAGTCCAATCTCGTCTCTTTCCCccaaaacaaactcatttacagcATTATGAACAGGTAGAATCATAATAAAGATAAGAACAATACTTATTACAATTGAAGAAAACCCTCTCCGACAAACCCGTGTCCGATGCATGTCGACGTTTTCCACCTTTGCTCTCTCAACCAAGAAGGAGAATAGCTTTATAATTACTACGTAATCATATTGAAACACAAGATACATGTTCATGCCAGTTTTCATAGCAATACAATAatcatgttgattttttttttccttgttgttgtttgttttttcgtttttttgtttgtttttattacccACAATGATATGGATATTGACTATAGCCAGGCCACCGATGCATTTCCGATAACGTTGTTTAAAATAGTAAACCACATTGTTGGTACAAATATCCGTTTACTCCGTAAGAATGATAATAACAGcgataataataaactattaaaaacgaTTCCCGTTGCTTCTTGGCGTtgcaaaaaagaagataaaaaaataatcctcGACGAAGGAAGAAAGGGAGGAAGAGGGGAAACTTGGCGTAGTTTGAGGGATAAGGGAGGATGAGGATGTGTCCTTCATCCTGGCTGTGATTCCTAAGGTAATCTGGTGTTAGTAAGACCTGATATAAAAGAGTTGCCTCTTCACTGAACTTAGACTGTATTTGTGAAATTAATGGGATTGGTTGCGGTGGAATATCAAGGCCACGCCCACTCTGAGGCCACACCCAAATACTGAATTTTCTCATTTATCAATATAAAAGTAGCTACGGCCTCAGAGCTGGATATTGAAATAAAACGTGTTGATTTGTGGGATACTGCAGGGCTGTTTGGCGTCGAAACGGGTTCACAGCCAATGTCGTTCCAGCTAGACAGACTACATGCATATACTGTGCTGACATCACACACCTGTGACCGCCGGGATCTGGCTGTACAATGGCAACtcgagagtgtgtatgtgtgagtatagacgtgtgtgtgagagtgtgttgtACATGTCTTTGCTCGTCGGTTGCGTTAGGAGATCGCATGTATATAAAGGGATTTCTTTAGTCGACGCCCTCGAAGCCTTGAGCGTTTTCCACCGCCATCAGAAGCTTCTCGCGCAGGTCTTCAAATGACTCGTACGTCGGGAGGTCCAGG

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0048468 cell development biological_process
GO:0022607 cellular component assembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210993 True 2387 lncRNA 0.39 2 759275 812057

Neighbor

gene id symbol gene type direction distance location
rx3 rax,rx3,LOC107739660,LOC107719081,LOC107584557 coding upstream 3623 752820 ~ 755652 (+)
cplx4a cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741,LOC107701934 coding upstream 8631 746242 ~ 750644 (+)
lman1 lman1,LOC107662211,LOC107739740,LOC107701961,LOC107719069 coding upstream 16329 730792 ~ 742946 (+)
ccbe1 ccbe1,LOC107662219,LOC107701959,LOC107584559,LOC107719070,LOC107600894,LOC107739739 coding upstream 36216 676866 ~ 723059 (+)
LOC122326268 herc1,LOC107701925,LOC108436580 coding upstream 264111 437774 ~ 495164 (+)
prlra LOC107662152,LOC107739665,LOC107600937,LOC107665241,LOC107584552 coding downstream 66172 878229 ~ 901350 (+)
agxt2 agxt2,LOC107662137,LOC107719064,LOC107739667,LOC102783298 coding downstream 89616 901673 ~ 915039 (+)
LOC122326806 LOC107719062 coding downstream 114301 926358 ~ 939559 (+)
arid6 LOC107739744,LOC107662105,LOC107600907,LOC107719083,LOC108436592 coding downstream 130796 942853 ~ 948284 (+)
gtf3c5 gtf3c5,LOC107600935,LOC107662094 coding downstream 173380 985437 ~ 990633 (+)
G142807 NA non-coding upstream 32683 726258 ~ 726592 (+)
G142729 LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962 non-coding upstream 325153 431624 ~ 434122 (+)
G142672 NA non-coding upstream 556100 202787 ~ 203175 (+)
G142658 NA non-coding upstream 563073 182416 ~ 196202 (+)
LOC122326263 NA non-coding upstream 579226 172944 ~ 180049 (+)
G142866 NA non-coding downstream 104564 916621 ~ 916963 (+)
LOC122326171 NA non-coding downstream 236321 1048378 ~ 1081301 (+)
G142941 NA non-coding downstream 260211 1072268 ~ 1074041 (+)
G142933 NA non-coding downstream 270110 1082167 ~ 1083273 (+)
G142954 NA non-coding downstream 278186 1090243 ~ 1102107 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other downstream 238781 1050838 ~ 1055925 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 341047 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 415941 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 1218047 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1421602 2233659 ~ 2237195 (+)

Expression


Co-expression Network