G142933


Basic Information

Item Value
gene id G142933
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1082167 ~ 1083273 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211144
CTGTCTGTCAGGATGGGGTGGGCCAGAGACGGCCGACTGAACCTTAGATGCAGAAGAAGGAGCAACAAAATCACCCGCAAGAGCATCTAAAgcaaaatctgaatctgaaggTTAGCGGGAGACTTAGAGGCAGGACAAGCGGGGATCTTGGCAGCCGGTGCCTCAGAAGAGGTTGTAAAGCCGCCAGACAGAATATCCAGAGCTTCAGTAGTGTCTAAGGAGGGCTGTGACACAAAAAACATCCACCAATCAAATCGCAGGATCCAGCAACGCTGACCAATCATTACACACATCCACGAGACTTTCTGAAAGACAATCAGTGTCACATTATGCAGAAGGCTATGACAGCGCTATTACCTCTTTCTCGGGAGGAGGATATTTCTTGAGCTCTTCCTCTGAGAATCTGTAATCTGGTGGGAGCGTGTCATCTCTCTCTCCGACACGAACTCCCTTTTTTGATGTCACATCCTTCtcctgctcaaaaaacattcattagtGTCAAAAAACGATGACAcgtttacatttgtaaatgaaaaacataagcATAGGATTATTACATGAACGATGTCCTTGGGTTTGAGTTCGGGTACTTTTTTGGGTGGCTCTGGTTTACCCAGTGTGTCGCCCAGAGCGCTGAGAGCGTC

Function

GO:

id name namespace
GO:0009653 anatomical structure morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211144 True 644 lncRNA 0.47 2 1082167 1083273

Neighbor

gene id symbol gene type direction distance location
cd8a NA coding upstream 5031 1074249 ~ 1077136 (+)
cd8b LOC107754642,LOC107665224,LOC107600931,LOC107739674,LOC107662663 coding upstream 13804 1064842 ~ 1068363 (+)
zmat1 krcc1,LOC107600930,LOC107662001,LOC107739673,LOC107584622 coding upstream 19027 1056331 ~ 1063140 (+)
grin1a grin1a,LOC107662014,LOC107754622,LOC108435476,LOC108278500,LOC107600932 coding upstream 34156 1023624 ~ 1048011 (+)
zgc:92275 zgc:92275,LOC107662064,LOC107754619,LOC107665231,LOC107739715,LOC105902521,LOC105024189,LOC106565467 coding upstream 66867 1005795 ~ 1015300 (+)
pcsk1 LOC107739678,LOC107661910,LOC107600928,LOC107665244 coding downstream 33318 1116591 ~ 1131625 (+)
ell2 ell2,LOC107739680,LOC107665220,LOC107600927,LOC107754629 coding downstream 55972 1139245 ~ 1152504 (+)
nudt2 nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228 coding downstream 97182 1180455 ~ 1184070 (+)
ubap1 ubap1,LOC107661828,LOC107739682,LOC107754631,LOC107665242 coding downstream 109126 1192399 ~ 1199773 (+)
dcaf12 dcaf12,LOC107661821,LOC107739683,LOC107600922,LOC107754635,LOC107584538,LOC107665237 coding downstream 120121 1203394 ~ 1212789 (+)
LOC122326171 NA non-coding upstream 866 1048378 ~ 1081301 (+)
G142941 NA non-coding upstream 8126 1072268 ~ 1074041 (+)
G142866 NA non-coding upstream 165204 916621 ~ 916963 (+)
G142832 NA non-coding upstream 270110 759275 ~ 812057 (+)
G142807 NA non-coding upstream 355575 726258 ~ 726592 (+)
G142954 NA non-coding downstream 6970 1090243 ~ 1102107 (+)
G142963 NA non-coding downstream 22212 1105485 ~ 1105817 (+)
G142964 NA non-coding downstream 23473 1106746 ~ 1106952 (+)
G142965 rfesd,LOC107661841,LOC107600903,LOC107735162 non-coding downstream 25049 1108322 ~ 1178639 (+)
G142952 NA non-coding downstream 117463 1200736 ~ 1201244 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 26242 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 276061 735722 ~ 806106 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 69831 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 144725 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 946831 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1150386 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1745841 2829114 ~ 2830356 (+)

Expression


Co-expression Network