glrx (glrx,LOC107661879,LOC107665229)


Basic Information

Item Value
gene id glrx
gene name glrx,LOC107661879,LOC107665229
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1153104 ~ 1156142 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211153
ACGACCATAAACAAAGGCGAAAGAGAACGATTCACTTCCTTAAAAGATTCGTTCGAAAACCCAAATTCGTTCACAAACACTAACCGTGCCTCCAAcccattttgaattttttttttaccgaggTGTGGTTAATTTTAATCCCGCCTCACTTTGAAGGGTGTGAACCGACGGGAACTGCGCGACCCACAAAGCCTGGAAAACAACTTTCGTTTGACTTCCCCGAAGTGGCGTACAGCTGTGCTAGTTACGCCAAGAGCAATGGCAGAATTTGTCAAGGCGCAGATCAAGGGCGACAAAGTAGTTGTGTTTCTGAAGCCGTCCTGTCCTTACTGCGTGTGCGCTAAGGATGTTTTGTCcaaatataaattcaaaagtGGACGCTTAGAGCTGATTGACATCAGTGGGCGCAGTGACATGGGCAGCATACAAGACTACCTGCAACAGATCACAGGCGCGCGCACCGTTCCCCGGGTCTTCATAGGGGAGCAGTGCATTGGAGGAGGAAGTGATGTTGACGGTCTGGACCGTTCTGGAAAACTGGAAGGCATGTTGCAGGCAATCGGATCTCTGCAGTGAAGGGCGTCAAGAAGGGGTCACATGATGCTGCAGCGAGACTTGCGGATCTGCCGTCTGCGCTGCTGGTACTCGCTGAGCTCCTGTAGGTAACCTCTGGAGGGCCAGCGCAGTCGCTCCACCTGCTCACGCTCCTCatctgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccatcacaGGAAACTTTTGCTACAGTGTTCCCTCCTGTTGAACGCCGgtgcatttaaaggaacactccacttgtttttggaaatgggctcattctccaacttaataaattgaattttgttgttttggactTATTCACTTATTCACTTTTGGACAACGAGCCTGTTTCCAAAACAAAGCGGAGGGTTCCTTTAAACAAGGCATATTATCCGTCCACCTTGTACTTCgattaaaataatgtcattgtCTCTATTTGTTTCCCATTAAgtgtattcaaaaataaattagaagtcttaaaaaacctgaaaataaaatattttcctgtCAAAGT
>TU211154
ACGACCATAAACAAAGGCGAAAGAGAACGATTCACTTCCTTAAAAGATTCGTTCGAAAACCCAAATTCGTTCACAAACACTAACCGTGCCTCCAAcccattttgaattttttttttaccgaggTGTGGTTAATTTTAATCCCGCCTCACTTTGAAGGGTGTGAACCGACGGGAACTGCGCGACCCACAAAGCCTGGAAAACAACTTTCGTTTGACTTCCCCGAAGTGGCGTACAGCTGTGCTAGTTACGCCAAGAGCAATGGCAGAATTTGTCAAGGCGCAGATCAAGGGCGACAAAGTAGTTGTGTTTCTGAAGCCGTCCTGTCCTTACTGCGTGTGCGCTAAGGATGTTTTGTCcaaatataaattcaaaagtGGACGCTTAGAGCTGATTGACATCAGTGGGCGCAGTGACATGGGCAGCATACAAGACTACCTGCAACAGATCACAGGCGCGCGCACCGTTCCCCGGGTCTTCATAGGGGAGCAGTGCATTGGAGGAGGAAGTGATGTTGACGGTCTGGACCGTTCTGGAAAACTGGAAGGCATGTTGCAGGCAATCGGATCTCTGCAGTGAAGGGCGTCAAGAAGGGGTCACATGATGCTGCAGCGAGACTTGCGGATCTGCCGTCTGCGCTGCTGGTACTCGCTGAGCTCCTGTAGGTAACCTCTGGAGGGCCAGCGCAGTCGCTCCACCTGCTCACGCTCCTCatctgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccatcacaGGAAACTTTTGCTACAGTGTTCCCTCCTGTTGAACGCCGgtgcatttaaaggaacactccaCCTGTTTCCAAAACAAAGCGGAGGGTTCCTTTAAACAAGGCATATTATCCGTCCACCTTGTACTTCgattaaaataatgtcattgtCTCTATTTGTTTCCCATTAAgtgtattcaaaaataaattagaagtcttaaaaaacctgaaaataaaatattttcctgtCAAAGT
>XM_043221456.1
AGACGACCATAAACAAAGGCGAAAGAGAACGATTCACTTCCTTAAAAGATTCGTTCGAAAACCCAAATTCGTTCACAAACACTAACCGTGCCTCCAAcccattttgaattttttttttaccgaggTGTGGTTAATTTTAATCCCGCCTCACTTTGAAGGGTGTGAACCGACGGGAACTGCGCGACCCACAAAGCCTGGAAAACAACTTTCGTTTGACTTCCCCGAAGTGGCGTACAGCTGTGCTAGTTACGCCAAGAGCAATGGCAGAATTTGTCAAGGCGCAGATCAAGGGCGACAAAGTAGTTGTGTTTCTGAAGCCGTCCTGTCCTTACTGCGTGTGCGCTAAGGATGTTTTGTCcaaatataaattcaaaagtGGACGCTTAGAGCTGATTGACATCAGTGGGCGCAGTGACATGGGCAGCATACAAGACTACCTGCAACAGATCACAGGCGCGCGCACCGTTCCCCGGGTCTTCATAGGGGAGCAGTGCATTGGAGGAGGAAGTGATGTTGACGGTCTGGACCGTTCTGGAAAACTGGAAGGCATGTTGCAGGCAATCGGATCTCTGCAGTGAAGGGCGTCAAGAAGGGGTCACATGATGCTGCAGCGAGACTTGCGGATCTGCCGTCTGCGCTGCTGGTACTCGCTGAGCTCCTGTAGGTAACCTCTGGAGGGCCAGCGCAGTCGCTCCACCTGCTCACGCTCCTCatctgtccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccatcacaGGAAACTTTTGCTACAGTGTTCCCTCCTGTTGAACGCCGgtgcatttaaaggaacactccacttgtttttggaaatgggctcattctccaacttaataaattgaattttgttgttttggactTATTCACTTATTCACTTTTGGACAACGAGCCTGTTTCCAAAACAAAGCGGAGGGTTCCTTTAAACAAGGCATATTATCCGTCCACCTTGTACTTCgattaaaataatgtcattgtCTCTATTTGTTTCCCATTAAgtgtattcaaaaataaattagaagtcttaaaaaacctgaaaataaaatattttcctgtCAAA
>XM_043221457.1
AAGAGACGACCATAAACAAAGGCGAAAGAGAACGATTCACTTCCTTAAAAGATTCGTTCGAAAACCCAAATTCGTTCACAAACACTAACCGTGCCTCCAAcccattttgaattttttttttaccgaggTGTGGTTAATTTTAATCCCGCCTCACTTTGAAGGGTGTGAACCGACGGGAACTGCGCGACCCACAAAGCCTGGAAAACAACTTTCGTTTGACTTCCCCGAAGTGGCGTACAGCTGTGCTAGTTACGCCAAGAGCAATGGCAGAATTTGTCAAGGCGCAGATCAAGGGCGACAAAGTAGTTGTGTTTCTGAAGCCGTCCTGTCCTTACTGCGTGTGCGCTAAGGATGTTTTGTCcaaatataaattcaaaagtGGACGCTTAGAGCTGATTGACATCAGTGGGCGCAGTGACATGGGCAGCATACAAGACTACCTGCAACAGATCACAGGCGCGCGCACCGTTCCCCGGGTCTTCATAGGGGAGCAGTGCATTGGAGGAGGAAGTGATGTTGACGGTCTGGACCGTTCTGGAAAACTGGAAGGCATGTTGCAGGCAATCGGATCTCTGCAGTGAAGggtcagaggtcaaagttTGCGTGAATACAGTACATCAGAATCCAACGTCAACCCAGAAGTCAAACAAAGGTCTCTTTCATCCTGTATTTAAACCAGTCTCCGATTTGTTTTTCGCCCCCCCTT

Function

symbol description
glrx Predicted to enable electron transfer activity; protein-disulfide reductase activity; and transferase activity. Orthologous to human GLRX (glutaredoxin).

NR:

description
PREDICTED: glutaredoxin-1-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016740 transferase activity molecular_function
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG:

id description
K03676 grxC, GLRX, GLRX2; glutaredoxin 3

RNA

RNA id representative length rna type GC content exon number start site end site
TU211153 False 1082 TUCP 0.45 3 1153109 1156142
TU211154 False 992 TUCP 0.46 4 1153109 1156142
XM_043221456.1 True 1082 mRNA 0.45 3 1153107 1156140
XM_043221457.1 False 706 mRNA 0.48 3 1153104 1155627

Neighbor

gene id symbol gene type direction distance location
ell2 ell2,LOC107739680,LOC107665220,LOC107600927,LOC107754629 coding upstream 600 1139245 ~ 1152504 (+)
pcsk1 LOC107739678,LOC107661910,LOC107600928,LOC107665244 coding upstream 21479 1116591 ~ 1131625 (+)
cd8a NA coding upstream 75968 1074249 ~ 1077136 (+)
cd8b LOC107754642,LOC107665224,LOC107600931,LOC107739674,LOC107662663 coding upstream 84741 1064842 ~ 1068363 (+)
zmat1 krcc1,LOC107600930,LOC107662001,LOC107739673,LOC107584622 coding upstream 89964 1056331 ~ 1063140 (+)
nudt2 nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228 coding downstream 24313 1180455 ~ 1184070 (+)
ubap1 ubap1,LOC107661828,LOC107739682,LOC107754631,LOC107665242 coding downstream 36257 1192399 ~ 1199773 (+)
dcaf12 dcaf12,LOC107661821,LOC107739683,LOC107600922,LOC107754635,LOC107584538,LOC107665237 coding downstream 47252 1203394 ~ 1212789 (+)
ubap2a ubap2a,ubap2,LOC107665236,LOC107661806 coding downstream 57758 1213900 ~ 1227997 (+)
mlnl mlnl coding downstream 82313 1238455 ~ 1241794 (+)
G142964 NA non-coding upstream 46152 1106746 ~ 1106952 (+)
G142963 NA non-coding upstream 47287 1105485 ~ 1105817 (+)
G142954 NA non-coding upstream 50997 1090243 ~ 1102107 (+)
G142933 NA non-coding upstream 69831 1082167 ~ 1083273 (+)
LOC122326171 NA non-coding upstream 71803 1048378 ~ 1081301 (+)
G142952 NA non-coding downstream 44594 1200736 ~ 1201244 (+)
G142950 NA non-coding downstream 45234 1201376 ~ 1202423 (+)
G142977 LOC107662880 non-coding downstream 59448 1215590 ~ 1246809 (+)
G142943 NA non-coding downstream 73406 1229548 ~ 1236155 (+)
G143139 wdr34,LOC107736865,LOC107584613 non-coding downstream 606240 1762382 ~ 1762837 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 97179 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 346998 735722 ~ 806106 (+)
LOC122326311 NA other downstream 71856 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 873962 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1077517 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1672972 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 2141848 3297990 ~ 3320013 (+)

Expression


Co-expression Network