G142952


Basic Information

Item Value
gene id G142952
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1200736 ~ 1201244 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211168
tgaaaacaatacattGTTTGGGACAACTTTGAGGAACTTTCTTAaaccacttcaaatgttgactgctGTTAATAAACCTTTTGGGTGAGTTTTCATCATACCTTTGCTTTTAGAggtgattatttttgtttactgttttttaatgaCCCAGGTGGCCGCGGCATTTAGTATAATGCAGTACTAAAAGCCTTAATTAAGCCCTATTAAGCACTTTCCTCTGAGATGGGATAAATGATAAGAATCACATATGACAGATGTCTCTTGGCCCAGGGAACACATGTAGGCTATTGGGTGGCTCATTTGGCCATTCATAAGTGTTTCATTATTTAGCAGCCAGatgtgcattattattttgctttttatttattgttttctcaGTTTCAACCATTATAGGTACAAAAACAGCCTCTTAAGCTCACTTTCCATGTGCAATATAATTTCACCAGTGTTAATCTGATAAATTTTTGTTGATACAAAGGATCCCATGTAGATCcctgaaaattaaaaga

Function

NR:

description
PREDICTED: O-phosphoseryl-tRNA(Sec) selenium transferase

GO:

id name namespace
GO:0019221 cytokine-mediated signaling pathway biological_process
GO:0071345 cellular response to cytokine stimulus biological_process
GO:0034097 response to cytokine biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211168 True 509 lncRNA 0.35 1 1200736 1201244

Neighbor

gene id symbol gene type direction distance location
ubap1 ubap1,LOC107661828,LOC107739682,LOC107754631,LOC107665242 coding upstream 963 1192399 ~ 1199773 (+)
nudt2 nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228 coding upstream 16666 1180455 ~ 1184070 (+)
ell2 ell2,LOC107739680,LOC107665220,LOC107600927,LOC107754629 coding upstream 48232 1139245 ~ 1152504 (+)
pcsk1 LOC107739678,LOC107661910,LOC107600928,LOC107665244 coding upstream 69111 1116591 ~ 1131625 (+)
cd8a NA coding upstream 123600 1074249 ~ 1077136 (+)
dcaf12 dcaf12,LOC107661821,LOC107739683,LOC107600922,LOC107754635,LOC107584538,LOC107665237 coding downstream 2150 1203394 ~ 1212789 (+)
ubap2a ubap2a,ubap2,LOC107665236,LOC107661806 coding downstream 12656 1213900 ~ 1227997 (+)
mlnl mlnl coding downstream 37211 1238455 ~ 1241794 (+)
aqp7 aqp7,LOC107661734,LOC107600917,LOC107739721 coding downstream 46870 1248114 ~ 1255051 (+)
kiaa1328 kiaa1328,LOC107600915,LOC107661705 coding downstream 56932 1258176 ~ 1277613 (+)
G142965 rfesd,LOC107661841,LOC107600903,LOC107735162 non-coding upstream 22097 1108322 ~ 1178639 (+)
G142964 NA non-coding upstream 93784 1106746 ~ 1106952 (+)
G142963 NA non-coding upstream 94919 1105485 ~ 1105817 (+)
G142954 NA non-coding upstream 98629 1090243 ~ 1102107 (+)
G142933 NA non-coding upstream 117463 1082167 ~ 1083273 (+)
G142950 NA non-coding downstream 132 1201376 ~ 1202423 (+)
G142977 LOC107662880 non-coding downstream 14346 1215590 ~ 1246809 (+)
G142943 NA non-coding downstream 28304 1229548 ~ 1236155 (+)
G143139 wdr34,LOC107736865,LOC107584613 non-coding downstream 561138 1762382 ~ 1762837 (+)
G143140 NA non-coding downstream 562232 1763476 ~ 1763743 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 44594 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 144811 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 394630 735722 ~ 806106 (+)
LOC122326311 NA other downstream 26754 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 828860 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1032415 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1627870 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 2096746 3297990 ~ 3320013 (+)

Expression


Co-expression Network