LOC122326311


Basic Information

Item Value
gene id LOC122326311
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1227998 ~ 1229055 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211224
CGCTCCTGCTCCATTCCTTCACATTCTGCCGGCCCACCAGCAGCCCCATTCACAGCTGCTCCATCATCACCTCACCCAGGATGGGCAGGGTGGGCCAAGCCAGAGAAGCCAGTCCAGCACCATGCAGCAGAAGACCCAGGTCAACAAATCCAACTATGGCAGCTCCCCTTATTGGGGCAACTGAGCGCAGTCCACAGCGCAGGTGCTGTCCCGCACCGATGACACGCCGATCAAAGCAGAGGGACACCCGTACACACTaccatcatcctcatcctcctcccACGTTCTCATCTCCCTTTTTCAAAGTTTTGGCTGTTGTATGtaaagtatatttatgtatgtatttatacagtatatatgtattgGTAGGATATGAAATGTggtttttctgcattttgtttttgaaggatttttttttttttttttttttcattgctaaCTGGCTAAGAGGATAtgatgagagagagaagtgATGAGAACAGAAGGGTGAATATACTTGAAGCAGAGCAAGCATCATGATTCGAACATGggagtttttatttgtatacataACCCTGATAATGTATGTACATTACTGCTAAGCTTGATCACTTGATGGTGAAgcctttttttaacttttgtatTTTGCTCTTCTCCCACCCCCTTCACCTGTGAACTTTTTTTCTATCGAGGGGGAATTTAATTTCAACGCTTAATTTTCTTCCCTCTGCCCTTCATTTGTGTCCCCTGTCCCTCTCCCCCCCCCAAACCACCAAATTGGCTAAACGGTAGCATTTTAgatcagatttcattttaacattggTTTTACCCTTgttgtcaaaataaaact
>XR_006247463.1
CCCTGGTTTTCCATGCGCTCCTGCTCCATTCCTTCACATTCTGCCGGCCCACCAGCAGCCCCATTCACAGCTGCTCCATCATCACCTCACCCAGGATGGGCAGGGTGGGCCAAGCCAGAGAAGCCAGTCCAGCACCATGCAGCAGAAGACCCAGGTCAACAAATCCAACTATGGCAGCTCCCCTTATTGGGGCAACTGAGCGCAGTCCACAGCGCAGGTGCTGTCCCGCACCGATGACACGCCGATCAAAGCAGAGGGACACCCGTACACACTaccatcatcctcatcctcctcccACGTTCTCATCTCCCTTTTTCAAAGTTTTGGCTGTTGTATGtaaagtatatttatgtatgtatttatacagtatatatgtattgGTAGGATATGAAATGTggtttttctgcattttgtttttgaaggatttttttttttttttttttttcattgctaaCTGGCTAAGAGGATAtgatgagagagagaagtgATGAGAACAGAAGGGTGAATATACTTGAAGCAGAGCAAGCATCATGATTCGAACATGggagtttttatttgtatacataACCCTGATAATGTATGTACATTACTGCTAAGCTTGATCACTTGATGGTGAAgcctttttttaacttttgtatTTTGCTCTTCTCCCACCCCCTTCACCTGTGAACTTTTTTTCTATCGAGGGGGAATTTAATTTCAACGCTTAATTTTCTTCCCTCTGCCCTTCATTTGTGTCCCCTGTCCCTCTCCCCCCCCCAAACCACCAAATTGGCTAAACGGTAGCATTTTAgatcagatttcattttaacattggTTTTACCCTTgttgtcaaaataaaactgtCCAGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211224 False 829 TUCP 0.44 2 1228013 1229045
XR_006247463.1 True 854 lncRNA 0.44 2 1227998 1229055

Neighbor

gene id symbol gene type direction distance location
ubap2a ubap2a,ubap2,LOC107665236,LOC107661806 coding upstream 1 1213900 ~ 1227997 (+)
dcaf12 dcaf12,LOC107661821,LOC107739683,LOC107600922,LOC107754635,LOC107584538,LOC107665237 coding upstream 15209 1203394 ~ 1212789 (+)
ubap1 ubap1,LOC107661828,LOC107739682,LOC107754631,LOC107665242 coding upstream 28225 1192399 ~ 1199773 (+)
nudt2 nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228 coding upstream 43928 1180455 ~ 1184070 (+)
ell2 ell2,LOC107739680,LOC107665220,LOC107600927,LOC107754629 coding upstream 75494 1139245 ~ 1152504 (+)
mlnl mlnl coding downstream 9400 1238455 ~ 1241794 (+)
aqp7 aqp7,LOC107661734,LOC107600917,LOC107739721 coding downstream 19059 1248114 ~ 1255051 (+)
kiaa1328 kiaa1328,LOC107600915,LOC107661705 coding downstream 29121 1258176 ~ 1277613 (+)
odf2a LOC107600900,LOC107739747,LOC107736864,LOC107675630,LOC107584531 coding downstream 493798 1722853 ~ 1731673 (+)
sptan1 sptan1,spna2,LOC107675629 coding downstream 504678 1733733 ~ 1761705 (+)
G142950 NA non-coding upstream 25575 1201376 ~ 1202423 (+)
G142952 NA non-coding upstream 26754 1200736 ~ 1201244 (+)
G142965 rfesd,LOC107661841,LOC107600903,LOC107735162 non-coding upstream 49359 1108322 ~ 1178639 (+)
G142964 NA non-coding upstream 121046 1106746 ~ 1106952 (+)
G142963 NA non-coding upstream 122181 1105485 ~ 1105817 (+)
G142943 NA non-coding downstream 493 1229548 ~ 1236155 (+)
G143139 wdr34,LOC107736865,LOC107584613 non-coding downstream 533327 1762382 ~ 1762837 (+)
G143140 NA non-coding downstream 534421 1763476 ~ 1763743 (+)
G143144 NA non-coding downstream 535706 1764761 ~ 1765095 (+)
G143149 NA non-coding downstream 610277 1839332 ~ 1963020 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 71856 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 172073 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 421892 735722 ~ 806106 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 801049 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1004604 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1600059 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 2068935 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 2472374 3701429 ~ 3704397 (+)

Expression


Co-expression Network