G143139 (wdr34,LOC107736865,LOC107584613)


Basic Information

Item Value
gene id G143139
gene name wdr34,LOC107736865,LOC107584613
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1762382 ~ 1762837 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211465
CCTATGAAATGGTGAGAAGTGGACTGAGTGTACAGGGCCCCCTCGCggtgaaaaagaaaattgcacGGGGGCCCGCAGTGTCACAGTCTCACCATCAGGGGGCACTGCTGCCACTGTCTCGCTGCTGAAAGAGCATTTGAGCACAAGGCCTCCCTCTGAGCCCACCAAGAACGTGTCCAGGTCCCACGGGGAAAGTGCCACTGAAGTTACTCCTATATTGGTGCTACCTCGGGTCTTCAGGGAGAGACAAGTGCATTATTAGGGTAAAATAGATTGAGATAGATTGAGATTCATCAGGCCATGAAAGTTACatcaataattatttaacacattttctttctcattctgatTTATCAGGGATCATTATGATTAGCTATCATGTCTAAACGgacattaatttgttttataaccATGTGATGCATTAGGGTAATGCGTTCATTACATCATCTTCAAAAG

Function

symbol description
wdr34 WD repeat-containing protein 34

NR:

description
PREDICTED: WD repeat-containing protein 34-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211465 True 456 lncRNA 0.45 1 1762382 1762837

Neighbor

gene id symbol gene type direction distance location
sptan1 sptan1,spna2,LOC107675629 coding upstream 677 1733733 ~ 1761705 (+)
odf2a LOC107600900,LOC107739747,LOC107736864,LOC107675630,LOC107584531 coding upstream 30709 1722853 ~ 1731673 (+)
kiaa1328 kiaa1328,LOC107600915,LOC107661705 coding upstream 484769 1258176 ~ 1277613 (+)
aqp7 aqp7,LOC107661734,LOC107600917,LOC107739721 coding upstream 507331 1248114 ~ 1255051 (+)
mlnl mlnl coding upstream 520588 1238455 ~ 1241794 (+)
specc1lb specc1lb,LOC107662600,LOC107600876,LOC107675626,LOC107736902,LOC107584528 coding downstream 8494 1771331 ~ 1794642 (+)
adora2ab adora2ab,LOC107736926,LOC107600912,LOC107675636,LOC107584529,LOC107739748,LOC107661642 coding downstream 34105 1796942 ~ 1804912 (+)
snrpd3l snrpd3,smd3,LOC105014836,LOC106563120 coding downstream 44358 1807195 ~ 1808839 (+)
LOC122326489 camkk2,LOC107739694,LOC107736868,LOC108437385 coding downstream 46570 1809407 ~ 1830152 (+)
zgc:113162 LOC107692271,LOC107584524,LOC107661621,LOC107736869 coding downstream 67847 1830684 ~ 1849485 (+)
G142977 LOC107662880 non-coding upstream 515573 1215590 ~ 1246809 (+)
G142943 NA non-coding upstream 526227 1229548 ~ 1236155 (+)
G142950 NA non-coding upstream 559959 1201376 ~ 1202423 (+)
G142952 NA non-coding upstream 561138 1200736 ~ 1201244 (+)
G142965 rfesd,LOC107661841,LOC107600903,LOC107735162 non-coding upstream 583743 1108322 ~ 1178639 (+)
G143140 NA non-coding downstream 639 1763476 ~ 1763743 (+)
G143144 NA non-coding downstream 1924 1764761 ~ 1765095 (+)
G143149 NA non-coding downstream 76495 1839332 ~ 1963020 (+)
G143153 NA non-coding downstream 110924 1873761 ~ 1944503 (+)
G143155 NA non-coding downstream 114834 1877671 ~ 1883530 (+)
LOC122326311 NA other upstream 533327 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 606240 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 706457 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 956276 735722 ~ 806106 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 267267 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 470822 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1066277 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 1535153 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 1938592 3701429 ~ 3704397 (+)

Expression


Co-expression Network