CI01000001_12602382_12613489 (CABLES2A)


Basic Information

Item Value
gene id CI01000001_12602382_12613489
gene name CABLES2A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12601961 ~ 12613938 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_12602382_12613489.mRNA
CCATATAGAGCACTCAGCAGCGTTAGTCAAACATTACAGTGTGAATACAACAAGAAATTGCATAAATGGATATTCATATTCCCTAGTAATAAAATATAGGGTGAATAAAGTCTGATAATTATTTAAGGGGGGAACTTAATGCTTATTAGAAATAAACATTTAATAATTAATACAAATATAATATTATTAAACTGTCACTCTCAATAAAAAGATCAATGTATTTCAGATTCCTAGTGTCCTGTACATTTGAAGCCAAATTATTGTACAAATTTATGAACTAAGACCTCTCGTCCAATCCGCTGTGACAAAATCTCATTTATATGCAAGTGTCAGGAATTTGAACCAATAAGGTGTCAGAGGGCGTGGCCGATTCCTCAGCCGGTCTAATAGCTCTGTCTGTTTTTAGCTTACTCACAGTAGAATGGCGGCCGCTGCTTGCGGTCCTCGCGTCTGTCCGAGAACTAATTCAGCTAAACCACACAAAGAACACCTGCGGAAAAGCCGGGATTCCCGTCGCAGACAAGCAGCACTATTGTTTCTCACCAATATATCTTTGGACGGACGACCGGTTTACAATCTAAGCAATGGAATCGGTGGCCCTAGGGAAGCCGAGAGCCGGTGTGTGGATGTCGGTACGTCGGCGGTGACGGGTCCCCCTTTGTCGACAACCAGCAGCTATGGAACCTTCACCCAAGTGTCATCCTCCATCAGTGGAGGGGCAGCGACCCCTGTACCGAGGACTAACACTTACCCTGCTCCTCTGAGCCCTCCTCCATTATTTAACCAAGGGAGCAGCGACGTTTTCACGGAGGATGGACGAGCAGATCCTTTGTCAGTCCAGGGACCCCCTCTTTCACCGACCTCTGGACCACTGAATGTGGTTTTAGGATCAAGTAAACCACCCAGTCAATTCCCGGGCTCCAACCCTGTGCCTGAATCCCGTCAAAGGACTCGTAACCTTTCTGGGTCTCCAGGGACAAAGGTTTCCAAGAAGGTGCACTTCATCAAGAATATGAGACCGTATGATACTCGAGGGAGCAGGGTTGTGCTGATCTGTGCCAAGAGATCCCTGTGTGCTGCTTTCTCTGTATTGCCGTATGGAGAGAGTTATCACATCAGTGACACTAAACTAGACGCACAGAGACAGAGACACTCTTCTGGTGGTGGAGTTGAAATGGTCCCTGGATTAGAGGGAGTGGAGGTGGACTTTGGAAAGACAGTATCATATGCCCGTTTTCTGCTCCCAACTAATGCCTTGGTCAGGCAGAAGAGCAGTTGCCCTCCTGACATCAGTACAGCTCAGACGCCAATGTCTCGAAACCGTATCAACGGGCAGAAAAACTTCACCCCTTCTCGAATCAACAGCACAGTTATACAAGATACTGGTGAGGAGCTGTCAGACTATGACCCCAACTTACTCAGTGACCCCCAGTGGCCATGTGGGAAGCACAAACGAGTGTTAATTTTCGCATCTTATGTGACAACGGTTATTGAATATGTGAAACCGTCTGACTTGAAGAAAGACATGAACGAGACGTTCAAGGAGAAGTTTCCTCATATAAAGCTGACGCTCAGCAAAATCAGAAGTTTGAAAAGGGAGATGCGCTCTGTGAGTGAGGAGTGTGGCCTACAGCCGGTTACCATAGCGATGGCCTATGTTTACTTTGAGAAGCTGGTTCTGCAAGGGAGGTTAAACAAGCACAACCGAAAGCTGGTGTCTGCCGCCTGCGTTTTACTAGCTGCCAAGATTAGCAGCGACCTCAAGAAACAAGAGGTCAAGCAACTGATTGATAGGTTGGAGGAGCGTTTCCGAATAAATCGCAAAGAGTTGATTTCCCTGGAGTTCACGGTTCTGGTTACCTTGGAGATGGCACTCTACCTCTCAGACAGCAAGAGGAAACCGCGCCTCTTTGACCGAGAATCCGGACTGGTCAAAATTCACATTGCTAAGGCAGATGATCAACTGTGAGCGGGGAATTGAATTGGAGAGAATTATAGGTAATCATACGTCACTATTAGTCTTCACTGAGCGTTGAAGAATGAAGTGCCTTTTCTATTACATTTGTCAGTACGGTTCTGTTGCCATAATATTTTCCACACTTCCCGTCTCTTTAATCTTTTTAATACCGAGTCATCACACACCTTGACATGTGAATGTGACTGTAGATCCGGTTGGAAAACCGTGTGACGTGTTGATTGAAATCTCCCTGTATGTGAATGCATTCACTCCTGTGATACTGTCGTAGAAGCTTTTTGAGGAGGTAGAACAGTACAAACACTGTGAGGGGAATCCTGTGACATTCTGCATGAGAATACTGTTTTTTGTGAGCGTGTCTATGAAAAAAAGATGTATTTTTCAAAATTGTCTATTTTAGCAGTATGTCATAGAGTGATGTGAGGCTGGTTTGCACTGCCAGA

Function

symbol description
cables2a Predicted to act upstream of or within regulation of cell cycle. Orthologous to human CABLES2 (Cdk5 and Abl enzyme substrate 2).

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_12602382_12613489.mRNA True 2418 mRNA 0.45 11 12601961 12613938

Neighbor

gene id symbol gene type direction distance location
CI01000001_12580225_12599311 NA coding upstream 2374 12579974 ~ 12599587 (+)
CI01000001_12568625_12571184 NA coding upstream 30018 12568534 ~ 12571943 (+)
CI01000001_12556923_12557900 NPBWR2 coding upstream 43862 12556183 ~ 12558099 (+)
CI01000001_12503839_12514653 ASXL1 coding upstream 86633 12503528 ~ 12515328 (+)
CI01000001_12486765_12495297 DCJ11, DNAJC11A, DNAJC11 coding upstream 106443 12485546 ~ 12495518 (+)
CI01000001_12633655_12648702 NA coding downstream 19260 12633198 ~ 12649116 (+)
CI01000001_12657571_12666609 NA coding downstream 43633 12657571 ~ 12667379 (+)
CI01000001_12718151_12726821 TBX18 coding downstream 103986 12717924 ~ 12727334 (+)
CI01000001_12814416_12815426 IRAK1BP1 coding downstream 200398 12814336 ~ 12815444 (+)
CI01000001_12873759_12874041 NA coding downstream 259821 12873448 ~ 12874215 (+)
G19718 NA non-coding upstream 24036 12577514 ~ 12577925 (+)
G19717 NA non-coding upstream 24542 12577205 ~ 12577419 (+)
G19704 NA non-coding upstream 46497 12555099 ~ 12555464 (+)
G19702 NA non-coding upstream 49503 12552027 ~ 12552458 (+)
G19697 NA non-coding upstream 55581 12545950 ~ 12546380 (+)
G19756 NA non-coding downstream 132052 12745990 ~ 12746308 (+)
G19783 NA non-coding downstream 185696 12799634 ~ 12810711 (+)
G19787 NA non-coding downstream 191363 12805301 ~ 12883428 (+)
G19792 NA non-coding downstream 207668 12821606 ~ 12826051 (+)
G19395 NA other upstream 920144 11681322 ~ 11681817 (+)
G19314 NA other upstream 1043288 11501194 ~ 11558673 (+)
G19039 NA other upstream 1747978 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2062115 10538388 ~ 10539846 (+)
G18937 NA other upstream 2125572 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 899466 13514115 ~ 13517063 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021780 cables2a coding NC_007134.7 CM002907.2 30898013 ~ 30919307 (+)