G143321 (LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771)


Basic Information

Item Value
gene id G143321
gene name LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 2233659 ~ 2237195 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU211695
GATAAGACATAAGCGTCAATGAGCAGAAATATATGGCATCTTATATCGATCATCAGATCACAGGAGTGAGGCAGTCGTCCTTGTGCATCATTTTCAACAACTCCTTTACAACAAACCGAGAAGTGAAGGGTCTTCTAATTTTCTCCCAGAAATCCAGGGCTAAGTGTATCAAAgattgtttctaaaaaaaaaataatcaacagCCAATTAACTCCTCACAGAAAAAACATGGATGAAGGTATACGATTTCCTACATGCACATACGTATGTCATCATAACATGCAAACATGACATCATCCAAAGAGATTAGCCACAGGTCAGTTGGACAAACTATacagcacacagacacaaactaGTGCTGTAATAAATTTGGCAcctggcatatatatatatatatgtatattttttccgtttttattatttttatttaaagaggaAAGGTGATGTCTAAATAAAGGGAAGTCAAAGCTCTATTAGGGTCACAACACTCCTCTCTATCCCAAAATGGAAATAGTGGCCAAAGGTACTGTAGTTCACTAGGACAtcacatactgtaaaaaaaaaaaataaagaaatcaaacGTCTTTACATTAACCTTTCTTTTAGCGACAGGTTGCGTGACGAAACATCAATTCCCCACCTATAGTGCAACCAGTACAAATACCATTACATTAACTGTTATACTTTCAGGGGGCACATCAATATTATATCAAGCACAATCAGCAATGCATCTGCGTTAAAATCTGGAATTTTTAGGTGAGCTACACATCCCGTATATATAAAGATCTCTGTGAAGCGTTGAATTGGTCCCATTTGTGCTAAAGCTAGATTGTGTTGAGTGCAGGTAAAGCTACAGGATGAGGAGCGCTCCCAAAGTGTCGCTTTGTTGCATAGCCCTACTGTACTGTACAGTCAACATTTCCCTGCATTTAGATATGATAAAGCGCAACAGTTAACAATTCCATTCATTATCGCCACAGCCACTGTTgagatttttaaagcaaaaaatcaCGAAAATTGCCAATCACCAAAatgtttcaggttttttttccagcagctTTTTATACCACGAAACAGaaagttgtatttttgtatacagTGTTGCTTGAAATTCCCATGAAGACAATGAATGGTAAAACACTTCCAGAACCACAACCGCTGAAAACGCAGACAGCCACTGTTGCGCTCTATTGCAGGCTCACCCTAAAAATACCACCATGTAAATAAACTCTTCAGATAGAAAAGACACAGCCGAAGTCGACAAACTGAAGACATGGGCAGGATCAGAGTATTATTCATATTCTGAATAAATGAACCTTTGTTAACTCtcatcaaaaacattacaatatatcACTAATTGAGAAGTGAAAACAACATATTCtctattttatatagttttcacTGAATCTTTTTGTGTGGTGAATAACAGATACTATAAAATTTCTACAAAGCGCTTTAAACCGTCTCACCCTCTTCCTCAATTATTGAAAGAGAAAGATATGAGCTCATTATGTGCCCTCTGGAAACAACACTGACATCAACAGCAACCAACAAATACAACCTTTCAATCTTCTATTACCCAACtgcattcgttttttttatatatcatctATTTTCCCCTGAATCGTTTCAATAACACACTCAGAAAAGACCGACATCATCAACATCCACCTAAAGTTTACAACGCTACAGTCTTAGTATTGTGCAATCTCGTTCCTCAAACACATGCTCAAGTACATCTAAGAAACAAATATCAGTGACATATAACCTATAGCGTATAGCATCTATTCATTGCCCTTTTTAGGCCAAATGCTTCATAATGCATCACGCACCAATGTGGCAATAAAATCTCAAAGTTTAGGCACTTGGTATCTTACCTCTCGAGAGTAAGAAAAGGATTAGACCTTACGTAATGTCCAGCTACACTCGGATCATTTACAAGGTACAAAATGGAACACTGTGAAAAGATTTTCAATCTACTGCAGTCTGATAGAAAAGTGAGTTCAATTTGGCCTTCTTTTTCAGTAGGTGGGAGCAGATCGTCTGTTCCACGCACGCTAGAGAATGAAGTAGAATACAGCAGCGCAAACTTTAAGGTTGTGTGTCCACCAAAGAGTTTTTTAGCGCCCCAAAAATGCCAGCAACTCTTCTGAAATTGCCCCGTTGTGGGCACTTGAGAGCGCTTTGGTGGCGCTTACCTGGTAAAACTATGATGATTGAAATATCATTCGAATATCAATTCAATAATTTTACAAGTAGAATGTGATGGTTGGTTGGTGTGGTATCCTCTAATGCAAATGGATGGACAAGGTAAAAGTAACAGTTACGTGTGCTACATTTCACCAAGAAATCAACACTGTTTAACTCCCAACTATCAATAACACTCTTGGAACAGATGCTTGCTGCCACGCCACACTAAAACATTATGCTCCCACTGGAAACAATTGAAATTTTATGCTGTATTCAGAAACAAATTAAACGTTTTGGTGAACACACTGCCAAAACCCCTAGAAATAACTTTTCAGTCATTGTGTCCTGTGCAAAGAGTCTAAAGAAGCTCTCAAATCTTAGCAAATAATGGTCTCACATTTTCCACCATAGCTTGTGTTTTAAGGGCATTTTCCTCTCTGAGGTCTGCGGTTTCGATCACAGGCACAGCTGATGTGACCATCTCCCTGCATGTGACCCTTGTAGAATCAGCCCTAATGAAAAATTAAGAGAAGTGGGGAGCGCCACTTGAGGCTAAACTCTTCAGTTCGAAACCTATCCAGACCTCCAAGTGCTTTCCTATTAACCGCAACTTTCGTAAACAGTAACAAGGATGTCTGATACTTTCTGAAACAAGAGAAAACACCTTTATAAAACCATATAGGCTCAAGCTGATGGTAAACAGTTGTAATAGTGTAAACTGCAACTCTTGTTTGCCTTCAAAATTAGCGGCTCCTGTAAGGGCGAAGATGATAAAAAATCATGCTAGACTGAATCATGCTAACACCAGTCATCTCTCTCAGTCTCCTGGTAGCTTCCAGATGCTCTACCGCTCGACCCAGGTGCCGCGTTCACTCCGAGGGAGTAGTGATACCCGTTGGGGACTCCGCTCTGGCTGCGGGAGAGCAGCGTGGAAGTTGGGGCTGCACCTGATGAAGTGTGAGCGATGGAGGCTGCAGTCCTGGGAGAGCGGCCCGTGCCGTACGTGCTCAAGGCATCGTGGAAGTCGTCCGATTCAGACAAGTGCGAGTCTTGCTGGAGGGGACCTAAATTGGCGGTGGGTGCTACCGCTGAGTAGGGTATCGTGCTCTGACAGGCCACGACTAAGGCGAGTGGGGCAGGGCCCTGTAGACTGGGCAGTGTTGAGCTGGACCGGAGAGGAGTTGGCAGTCTTGTAGGCAACAGCAGGCCGAGGGGTAAGGGGCGTTTGTGGGAGCTGTCTACGCCCGCGGCAGGGTGTGCTGGTGCCTGAGGTATGAACGACTGAAGTTCCTTTAGCTGTGTTAACTCC

Function

NR:

description
PREDICTED: voltage-dependent N-type calcium channel subunit alpha-1B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211695 True 3499 TUCP 0.41 2 2233659 2237195

Neighbor

gene id symbol gene type direction distance location
slc31a2 LOC107661547 coding upstream 234612 1995787 ~ 1999047 (+)
LOC122326700 NA coding upstream 280433 1949736 ~ 1953226 (+)
zgc:113162 LOC107692271,LOC107584524,LOC107661621,LOC107736869 coding upstream 384174 1830684 ~ 1849485 (+)
LOC122326489 camkk2,LOC107739694,LOC107736868,LOC108437385 coding upstream 403507 1809407 ~ 1830152 (+)
snrpd3l snrpd3,smd3,LOC105014836,LOC106563120 coding upstream 424820 1807195 ~ 1808839 (+)
LOC122326937 NA coding downstream 43386 2280581 ~ 2287288 (+)
LOC122326565 LOC107579035 coding downstream 381040 2618235 ~ 2627353 (+)
LOC122326563 LOC107579035,LOC107736917 coding downstream 393901 2631096 ~ 2656760 (+)
smarcb1b smarcb1b,smarcb1,LOC107661349,LOC107736887 coding downstream 507692 2744887 ~ 2752853 (+)
chchd10 chchd10,LOC107736936,LOC107692329,LOC107737885,LOC107662830 coding downstream 545153 2782348 ~ 2784025 (+)
G143315 NA non-coding upstream 52057 2181072 ~ 2181602 (+)
G143290 NA non-coding upstream 160998 2072174 ~ 2072661 (+)
LOC122326018 NA non-coding upstream 249569 1981923 ~ 1984090 (+)
G143149 NA non-coding upstream 270639 1839332 ~ 1963020 (+)
G143153 NA non-coding upstream 289156 1873761 ~ 1944503 (+)
G143339 NA non-coding downstream 98064 2335259 ~ 2335791 (+)
G143340 NA non-coding downstream 99586 2336781 ~ 2338470 (+)
G143354 LOC107595722,LOC107662860,LOC107739708,LOC107548798 non-coding downstream 161877 2399072 ~ 2400069 (+)
G143356 NA non-coding downstream 165552 2402747 ~ 2404090 (+)
G143349 NA non-coding downstream 189294 2426489 ~ 2490200 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 176980 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 1004604 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 1077517 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 1177734 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 1427553 735722 ~ 806106 (+)
gnrh2 LOC107595723 other downstream 591919 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 1060795 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 1464234 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 1869606 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 1895241 4132436 ~ 4386212 (+)

Expression


Co-expression Network