G143590


Basic Information

Item Value
gene id G143590
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 3488511 ~ 3492587 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212095
TactgttagggttatgtattgacattttgcaactttgatccttcagttacagcttccatcgggtgccaggctttgtcagcctgatgagaacggaatgttggagttaaatgttgacagttatgcacctgtggccttttagtttcagtttgattcttggtcataacatggcctccgtagaatactgatagggccaccggaagaatctgaaggagtgaagattctgacgcacaagaaatgtggccaattgttttcatttactgtatcttgtcctttcctctataaataaagtgacttgcgatctgagcgtcggaggaggcaaagcaggaggaggcaaagcaggaggaggcaaagcagggaaggaggcagaaggcaggggcctgcccggcccccggcctcaggcggactgagatccgtctggagacaaaagggaggttaaggagaaacctgcttctctcccgcttgcattCGACAGCgcaatctttgcaagccttaaaatccaaaaacttgtcttgtgttttatttcgctttgagttgatccttcctggtaaagagccgt
>TU212097
TactgttagggttatgtattgacattttgcaactttgatccttcagttacagcttccatcgggtgccaggctttgtcagcctgatgagaacggaatgttggagttaaatgttgacagttatgcacctgtggccttttagtttcagtttgattcttggtcataacatggcctccgtagaatactgatagggccaccggaagaatctgaaggagtgaagattctgacgcacaagaaatgtggccaattgttttcatttactgtatcttgtcctttcctctataaataaagtgacttgcgatctgagcgtcggaggaggcaaagcaggaggaggcaaagcaggaggaggcaaagcagggaaggaggcagaaggcaggggcctgcccggcccccggcctcaggcggactgagatccgtctggagacaaaagggaggttaaggagaaacctgcttctctcccgcttgcattCGACAGCgcaatctttgcaagccttaaaatccaaaaacttgtcttgtgttttatttcgctttgagttgatccttcctggtaaagagccgtttgagtgaaatagtctcaacat
>TU212099
TactgttagggttatgtattgacattttgcaactttgatccttcagttacagcttccatcgggtgccaggctttgtcagcctgatgagaacggaatgttggagttaaatgttgacagttatgcacctgtggccttttagtttcagtttgattcttggtcataacatggcctccgtagaatactgatagggccaccggaagaatctgaaggagtgaagattctgacgcacaagaaatgtggccaattgttttcatttactgtatcttgtcctttcctctataaataaagtgacttgcgatctgagcgtcggaggaggcaaagcaggaggaggcaaagcaggaggaggcaaagcaggaggaggcaaagcagggaaggaggcagaaggcaggggcctgcccggcccccggcctcaggcggactgagatccgtctggagacaaaagggaggttaaggagaaacctgcttctctcccgcttgcattCGACAGCgcaatctttgcaagccttaaaatccaaaaacttgtcttgtgttttatttcgctttgagttgatccttcctggtaaagagccgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212095 False 556 lncRNA 0.48 2 3488511 3492565
TU212097 True 578 lncRNA 0.47 2 3488511 3492587
TU212099 False 571 lncRNA 0.48 2 3488511 3492565

Neighbor

gene id symbol gene type direction distance location
LOC122326141 aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728 coding upstream 8017 3475983 ~ 3480494 (+)
LOC122326952 NA coding upstream 149546 3336985 ~ 3338965 (+)
LOC122326784 ube2g1b,ub2g1,LOC107686891,LOC107595690,LOC106579958,LOC103152401,LOC106931442 coding upstream 158706 3326500 ~ 3329805 (+)
LOC122326816 NA coding upstream 194503 3291697 ~ 3294008 (+)
LOC122326343 LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914 coding upstream 512460 2966166 ~ 2976051 (+)
LOC122326336 vps29,LOC107595689 coding downstream 1397 3493984 ~ 3497228 (+)
gpn3 gpn3,LOC107686892,LOC107692302,LOC106563155 coding downstream 7058 3499645 ~ 3502742 (+)
arpc3 arpc3,LOC107737855,LOC107707141 coding downstream 10635 3503222 ~ 3505587 (+)
atp2a2b atp2a2b,atp2a2,LOC107708347,LOC107556944,LOC108444117 coding downstream 21446 3514033 ~ 3542738 (+)
bcr bcr,LOC107595694,LOC107679847,LOC107556943,LOC105889081,LOC105014833,LOC106566295 coding downstream 51656 3544243 ~ 3602480 (+)
LOC122326852 NA non-coding upstream 151822 3336261 ~ 3336689 (+)
G143578 NA non-coding upstream 173038 3315177 ~ 3315473 (+)
G143509 NA non-coding upstream 550894 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 625494 2862772 ~ 2863017 (+)
G143465 NA non-coding upstream 687163 2800730 ~ 2801348 (+)
G143638 NA non-coding downstream 116332 3608919 ~ 3610050 (+)
G143656 NA non-coding downstream 259012 3751599 ~ 3752198 (+)
LOC122326834 NA non-coding downstream 270745 3763332 ~ 3769556 (+)
G143664 NA non-coding downstream 310871 3803458 ~ 3803769 (+)
LOC122326258 NA non-coding downstream 427146 3919733 ~ 3921719 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 168498 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 658155 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 1251316 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 1431832 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 2259456 1227998 ~ 1229055 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 208842 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 614214 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 639849 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1019339 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 1212570 4705157 ~ 4709441 (+)

Expression


Co-expression Network