G143638


Basic Information

Item Value
gene id G143638
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 3608919 ~ 3610050 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212176
AGGAGTATTTATTGGGAGACAAGAGTTtctataaataacacaaaatcaAAGATCAACCTTAACGTTAACGTACAATCTTtgcactgcatttaaaaagcaagttttgaaataaaagaaatatgtttGGACTCCTTCATGGGCCACTGACTGACATCTGgttatgatttaatatttaaaaggacGTTTTGTGTGTCAGATTACAGTTTTGATGAATTACTAGATagaataaagaaacatttttttaaattttgaagtCAATTAATAGGGCCTTAAGgaaaataatttactcaccccaagttgttccaaacctttatgactTTAACCCTTTGACTTTCActgtgtttatattatatagtagttgttttaataatacttttatattctttagcttttaaaaaaaatattccttgatatcattcatttattttaaattaagttttagttttaatttagtaCTTCAGCTTCATTTGCCGACAATTtacaaattacataatttatgtatttctgtttttctttaagCTTTTCAccttatatttattacattttttaattgcagaTGTATTCCAATTACCaaactttctttttattgaCACTCTTAGCTTAACTAAATTGTTTGtaacaacacgagggtgagtaattgacACAATAGTAATTCTTTTGCTTTTAACATCAGTCGActgacacacagaaacacagtcTTTTTTCCAGCCATCGGTGGACTTCATTCCCTCCGTGTCGTCTGCGATGCCTTTGCTATTTCAGGCTGTGCTGGCTCTCGTGGTGTCTGCGAAGATCTACCTTCCTCTGGAAGCCTTTGGAGCAGATCTCGCAGCCGAACGGCTTGAATCCGGTGTGTTTGCGGCTGTGCGTGATGAGGTTAGAGCTCTGGCTGAAGGCCTTGCCACAAACCTGGCATTTGTGAGGCTTCTCACCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212176 True 936 lncRNA 0.35 2 3608919 3610050

Neighbor

gene id symbol gene type direction distance location
bcr bcr,LOC107595694,LOC107679847,LOC107556943,LOC105889081,LOC105014833,LOC106566295 coding upstream 6439 3544243 ~ 3602480 (+)
atp2a2b atp2a2b,atp2a2,LOC107708347,LOC107556944,LOC108444117 coding upstream 66181 3514033 ~ 3542738 (+)
arpc3 arpc3,LOC107737855,LOC107707141 coding upstream 103332 3503222 ~ 3505587 (+)
gpn3 gpn3,LOC107686892,LOC107692302,LOC106563155 coding upstream 106177 3499645 ~ 3502742 (+)
LOC122326336 vps29,LOC107595689 coding upstream 111691 3493984 ~ 3497228 (+)
trnam-cau_115 NA coding downstream 5110 3615160 ~ 3615231 (+)
tsc1b tsc1,tsc1b,LOC107595695,LOC107556942 coding downstream 6989 3617039 ~ 3634175 (+)
stom stom,LOC107741953,LOC107556938,LOC107708355 coding downstream 127331 3737381 ~ 3748407 (+)
rxraa rxraa,rxra,LOC107708356,LOC107679846,LOC107556936,LOC107686886,LOC107573462 coding downstream 176709 3786759 ~ 3918707 (+)
brd3a LOC107708359,LOC107686882,LOC107573464,LOC107741956 coding downstream 327328 3937378 ~ 3945807 (+)
G143590 NA non-coding upstream 116332 3488511 ~ 3492587 (+)
LOC122326852 NA non-coding upstream 272230 3336261 ~ 3336689 (+)
G143578 NA non-coding upstream 293446 3315177 ~ 3315473 (+)
G143509 NA non-coding upstream 671302 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 745902 2862772 ~ 2863017 (+)
G143656 NA non-coding downstream 141549 3751599 ~ 3752198 (+)
LOC122326834 NA non-coding downstream 153282 3763332 ~ 3769556 (+)
G143664 NA non-coding downstream 193408 3803458 ~ 3803769 (+)
LOC122326258 NA non-coding downstream 309683 3919733 ~ 3921719 (+)
G143717 NA non-coding downstream 465477 4075527 ~ 4086526 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 288906 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 778563 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 1371724 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 1552240 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 2379864 1227998 ~ 1229055 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 91379 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 496751 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 522386 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 901876 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 1095107 4705157 ~ 4709441 (+)

Expression


Co-expression Network