G143751


Basic Information

Item Value
gene id G143751
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 4588726 ~ 4589152 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212368
gTTTAAGCTTTGTGATTTGCATTTTCGTTTCATTAATTTGTGCAGGCCTAGGTGCTGATCACCCcgagttattattttattttattttttttttctatgggtGTAAGTTGCCTCAGCCCTCTGATTCtcaaaaataatcaacaatGGAAATAATTTTCAGAATGTACCACTAATGGTAAAAGACATCTAAACGACAGCCCGAATTGAGGCTCGGTCAAAAGATTGATCTGGCCATAACAcgtgtaaataaacaaacaaacacctaaccatatatttgtaatataatgcaTAGTGTTCGTCTCCCGATGTTAGgatgtttctttcatttttttttttcctccatgattaatttatgatattttaagttTGTAACAGTGTTTGAATCCTGCAAAATGCGCCCTGCAGGTTCGTGTGTattgcactttta

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU212368 True 427 lncRNA 0.34 1 4588726 4589152

Neighbor

gene id symbol gene type direction distance location
nkx6.1 nkx6-1,nkx6.1,LOC107706438,LOC107700773,LOC107722812,LOC107703597,LOC107591753 coding upstream 268 4585890 ~ 4588458 (+)
rpl17 rpl17,LOC107722835,LOC107700774,LOC107703598 coding upstream 5424 4580634 ~ 4583302 (+)
LOC122327011 NA coding upstream 5569 4583099 ~ 4583157 (+)
LOC122327008 NA coding upstream 6736 4581918 ~ 4581990 (+)
LOC122327010 NA coding upstream 7600 4581051 ~ 4581126 (+)
abraxas1 fam175a,LOC107681177,LOC107589234,LOC107703595,LOC107591751,LOC107722832 coding downstream 97764 4686916 ~ 4690339 (+)
helq helq,LOC107681193,LOC107591711 coding downstream 103040 4692192 ~ 4698582 (+)
hpse hpse coding downstream 109574 4698726 ~ 4704776 (+)
amacr amacr coding downstream 131604 4720756 ~ 4729360 (+)
LOC122326163 LOC107681122,LOC107589283,LOC107706442 coding downstream 165474 4754626 ~ 4757400 (+)
LOC122326582 NA non-coding upstream 10598 4563334 ~ 4578128 (+)
G143745 NA non-coding upstream 36258 4551421 ~ 4552468 (+)
G143717 NA non-coding upstream 502200 4075527 ~ 4086526 (+)
LOC122326258 NA non-coding upstream 667007 3919733 ~ 3921719 (+)
G143664 NA non-coding upstream 784957 3803458 ~ 3803769 (+)
G143826 NA non-coding downstream 162065 4751217 ~ 4751510 (+)
G143827 NA non-coding downstream 162755 4751907 ~ 4752259 (+)
G143872 NA non-coding downstream 210950 4800102 ~ 4862403 (+)
G143887 NA non-coding downstream 301986 4891138 ~ 4893087 (+)
LOC122326855 NA non-coding downstream 445778 5034930 ~ 5067800 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other upstream 64546 4511926 ~ 4524180 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other upstream 202514 4132436 ~ 4386212 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other upstream 374954 4106801 ~ 4213772 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other upstream 884329 3701429 ~ 3704397 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 1268713 3297990 ~ 3320013 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 116005 4705157 ~ 4709441 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other downstream 141451 4730603 ~ 4745266 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other downstream 310338 4899490 ~ 4911816 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other downstream 358432 4947584 ~ 5028046 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other downstream 911951 5501103 ~ 5506433 (+)

Expression


Co-expression Network