btc (LOC107706483,LOC107681194,LOC107722828,LOC107703511)


Basic Information

Item Value
gene id btc
gene name LOC107706483,LOC107681194,LOC107722828,LOC107703511
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 4705157 ~ 4709441 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212480
ACCCCAAGGTAAACTTTGAGAAGACGGCTAAAAAGTTTCTGGCGACTCAATGTAGTCGTTTAATAAAGCACTCGCTGTAAAATGAAGGCCATGACATCCGAAGCAGCCCGGGAAATGAAGTCTTCGCTTTGAAGCGCAACTCGAAGTACAAATGGACAAGACGCGCAGGTTCATTCTGGGAATAATATCAGCTGTGGTCCTATGCAAATACTCCCAAGCTGAATGGAATACCACAAAGACACCAGAGAACAGGACTGTGTCCTGCGATCACCATGACAACTGCACAGATTCAGCTGACGACCACATCTGGAGCGGACACTTCTCTAAATGTCCAAGAGAATACAAGCATTACTGTATCCATGGTGTTTGCCGTTTTGTAAAAGCTCAGAACACTCCTTCGTGCAGATGTGAAAAGGGATATATCGGCACTCGGTGTGAATATCATGATCTCGATCAACTCGTAGAAGAACGAAAGAAAATAGTGATTGCATGTGTGGTGGCAGGTTTGGTCTTTCTGATTCTGCTCATCGTATTCATATGCGTCTGTACACAGTGAGTAACGTGATGTATTTTGATATATACTAGTCTAGAAGAGTcttggataatttttttttaactttaaaagtcTTCTTTCTTTTGCCCGTCTTCTCTCTTGTTCCACAGCAAACGATATAAACCATGTcgaaaaaagaagagaaaaaaggaaaCGAGCGATGAAGATGAAAAGCTGAGTTCACTAAACGCGCATGAAGCTGTAACTGCTCCGCTCGATACATCTGACACAAATGCTGTATGAAtgaCAATGAAGTGATCCTGCCAAGGTTGCTAATGGCATGATTGTAGTGAGGAAACGAGGACTCGTCCTGCTGAGTGATGAAAACGGTGCTTTACGGTAATCCTGAGTGGACTTTAAATGAACTTTGGAGATATGGTGTGAAAGGTAACCTTTGCCATTCTCTGTGCTACTGTTTACCTCATTCTTCATGCCACAACTCATTTTCACGCTTTTCAGAAGAAAAGTTGGAAATGAACTGAACGTGTATGCCTTCAGAATGGCTGTAATGAGAACGTGTATCATAATTTAAGAGGGGATATGCAATATGCTGAATGCAAACATTTTAAGcctatttatattgcatatgatgcacagaatattaaaaaaaggttaccatatATTACATTCGATAGATGGTTcaattaagttaaatattatattcaccGTTTCAGTGGTGTCTGGAAACAGTTCTCCCTACATTTAACGGACCAAAATGTTCTCTTAActtggatttatttattaacatgtatatagaaaatgtgttgttttgtttggtgttaagagtatattttaaattctgaaattaccattaatgtgtgtttttttttttttttttgagagagagagataagtATTAgccataataaataaaatgttttgaaatcacgtatttggttaaaatatttgtaattgaacaacaatgttttttttttttttttttttttatgtatttttgtgagGTGAAGTTTGGAATTTTTAATGATAAAGTTGAACAtacttttcctccttttttgaTTGTAAGCACTAAAATATGAGATTTTCActataaaaatggctttttaaacaTGGTTTGTCAGTATTTGTATTACTGTAATGTTACACAAGAacgtggtttaaaaaaatgcatttgtggtACTGTAAATACTTTGCATTGTGTTCTGTAATCAAGGTGACTGTGGCACATAAACCGATAATTTCTTCACACCAAGATGGAAAATGTCCATGGATTGTGCAAAGGTGCTTAGCTAGAATAAACTGTCCACCG
>XM_043221443.1
AATAACCTCCAGCCAGTCCGTCACTCCCCTCTTCACTTGATGAAACCCCAAGGTAAACTTTGAGAAGACGGCTAAAAAGTTTCTGGCGACTCAATGTAGTCGTTTAATAAAGCACTCGCTGTAAAATGAAGGCCATGACATCCGAAGCAGCCCGGGAAATGAAGTCTTCGCTTTGAAGCGCAACTCGAAGTACAAATGGACAAGACGCGCAGGTTCATTCTGGGAATAATATCAGCTGTGGTCCTATGCAAATACTCCCAAGCTGAATGGAATACCACAAAGACACCAGAGAACAGGACTGTGTCCTGCGATCACCATGACAACTGCACAGATTCAGCTGACGACCACATCTGGAGCGGACACTTCTCTAAATGTCCAAGAGAATACAAGCATTACTGTATCCATGGTGTTTGCCGTTTTGTAAAAGCTCAGAACACTCCTTCGTGCAGATGTGAAAAGGGATATATCGGCACTCGGTGTGAATATCATGATCTCGATCAACTCGTAGAAGAACGAAAGAAAATAGTGATTGCATGTGTGGTGGCAGGTTTGGTCTTTCTGATTCTGCTCATCGTATTCATATGCGTCTGTACACACAAACGATATAAACCATGTcgaaaaaagaagagaaaaaaggaaaCGAGCGATGAAGATGAAAAGCTGAGTTCACTAAACGCGCATGAAGCTGTAACTGCTCCGCTCGATACATCTGACACAAATGCTGTATGAAtgaCAATGAAGTGATCCTGCCAAGGTTGCTAATGGCATGATTGTAGTGAGGAAACGAGGACTCGTCCTGCTGAGTGATGAAAACGGTGCTTTACGGTAATCCTGAGTGGACTTTAAATGAACTTTGGAGATATGGTGTGAAAGGTAACCTTTGCCATTCTCTGTGCTACTGTTTACCTCATTCTTCATGCCACAACTCATTTTCACGCTTTTCAGAAGAAAAGTTGGAAATGAACTGAACGTGTATGCCTTCAGAATGGCTGTAATGAGAACGTGTATCATAATTTAAGAGGGGATATGCAATATGCTGAATGCAAACAAAGCAGATTTATCTTGGTTTAATTTTAAGcctatttatattgcatatgatgcacagaatattaaaaaaaggttaccatatATTACATTCGATAGATGGTTcaattaagttaaatattatattcaccGTTTCAGTGGTGTCTGGAAACAGTTCTCCCTACATTTAACGGACCAAAATGTTCTCTTAActtggatttatttattaacatgtatatagaaaatgtgttgttttgtttggtgttaagagtatattttaaattctgaaattaccattaatgtgtgtttttttttttttttttgagagagagagataagtATTAg

Function

NR:

description
probetacellulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212480 True 1820 TUCP 0.37 6 4705201 4709441
XM_043221443.1 False 1368 mRNA 0.39 6 4705157 4709034

Neighbor

gene id symbol gene type direction distance location
hpse hpse coding upstream 381 4698726 ~ 4704776 (+)
helq helq,LOC107681193,LOC107591711 coding upstream 6575 4692192 ~ 4698582 (+)
abraxas1 fam175a,LOC107681177,LOC107589234,LOC107703595,LOC107591751,LOC107722832 coding upstream 14818 4686916 ~ 4690339 (+)
nkx6.1 nkx6-1,nkx6.1,LOC107706438,LOC107700773,LOC107722812,LOC107703597,LOC107591753 coding upstream 116699 4585890 ~ 4588458 (+)
rpl17 rpl17,LOC107722835,LOC107700774,LOC107703598 coding upstream 121855 4580634 ~ 4583302 (+)
amacr amacr coding downstream 11315 4720756 ~ 4729360 (+)
LOC122326163 LOC107681122,LOC107589283,LOC107706442 coding downstream 45185 4754626 ~ 4757400 (+)
rai14 rai14,LOC107681156,LOC107706485,LOC107589239,LOC107750373,LOC107703593,LOC107591710 coding downstream 51724 4761165 ~ 4793419 (+)
fgf10a fgf10a,LOC107706443,LOC107589284,LOC107750480,LOC107703510,LOC107591746,LOC107681114 coding downstream 102057 4811498 ~ 4826764 (+)
ccdc80l2 ccdc80l2,LOC107706489,LOC107589242,LOC107681168,LOC107750362 coding downstream 184586 4894027 ~ 4898585 (+)
G143751 NA non-coding upstream 116005 4588726 ~ 4589152 (+)
LOC122326582 NA non-coding upstream 127029 4563334 ~ 4578128 (+)
G143745 NA non-coding upstream 152689 4551421 ~ 4552468 (+)
G143717 NA non-coding upstream 618631 4075527 ~ 4086526 (+)
LOC122326258 NA non-coding upstream 783438 3919733 ~ 3921719 (+)
G143826 NA non-coding downstream 41776 4751217 ~ 4751510 (+)
G143827 NA non-coding downstream 42466 4751907 ~ 4752259 (+)
G143872 NA non-coding downstream 90661 4800102 ~ 4862403 (+)
G143887 NA non-coding downstream 181697 4891138 ~ 4893087 (+)
LOC122326855 NA non-coding downstream 325489 5034930 ~ 5067800 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other upstream 180977 4511926 ~ 4524180 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other upstream 318945 4132436 ~ 4386212 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other upstream 491385 4106801 ~ 4213772 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other upstream 1000760 3701429 ~ 3704397 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 1385144 3297990 ~ 3320013 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other downstream 21162 4730603 ~ 4745266 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other downstream 190049 4899490 ~ 4911816 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other downstream 238143 4947584 ~ 5028046 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other downstream 791662 5501103 ~ 5506433 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other downstream 792592 5502033 ~ 5517936 (+)

Expression


Co-expression Network