G143937


Basic Information

Item Value
gene id G143937
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5151557 ~ 5151889 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212653
TCATAACAAGTTTTCAGGGAAATCTTCCCTCCAGGTAACCATGACATTGTTATTCGCCGAGCacaaatacacttaaaaaatatCCCACTGCTTGGAAACCAGAATTCATGTTTGTCATACCCAGAGTAAACAAACAGATTGATTCAGATTTGCTCCCGTGTTTTCAAGAGCCTTTTAGCGGTGCGCTTACCATGCAGGGCTCGGAGCAAATGGATGGCCGTCGAAAATGATGCTTTCATCCACTGCAAGGAACGTGCGGGAGTGCGTAAGATGAAATGGCCTGTCATTGTCAGCGGGAGCCAGCACCTGCAGCCATCGCACGTTGAGCTAAtt

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212653 True 333 lncRNA 0.47 1 5151557 5151889

Neighbor

gene id symbol gene type direction distance location
zgc:103482 zgc:103482,LOC107708531,LOC107703577,LOC107706502,LOC107681060 coding upstream 10056 5139161 ~ 5141501 (+)
si:dkey-30k6.5 LOC107681183,LOC107706501,LOC107708532,LOC107703579,LOC107591696 coding upstream 12729 5133745 ~ 5138828 (+)
LOC122326134 hspb11,LOC107591699,LOC107703580,LOC107681190,LOC107706446,LOC107589249,LOC107708534 coding upstream 18251 5132205 ~ 5133306 (+)
pde6b pde6b,LOC107706500,LOC107681163,LOC107708533,LOC108436964,LOC107703582 coding upstream 23331 5119094 ~ 5128226 (+)
si:dkey-247m21.3 LOC107706496,LOC107681108,LOC107589286,LOC107591744,LOC107703507,LOC107708508 coding upstream 54360 5076556 ~ 5097197 (+)
efna5a efna5a,LOC107706503,LOC107589251,LOC107681184,LOC107703575,LOC107708530,LOC106563326,LOC105015058 coding downstream 51575 5203464 ~ 5252913 (+)
LOC122326646 gadd45gb.1,LOC107591738,LOC107589289,LOC107706448,LOC107708506,LOC107681111 coding downstream 137758 5289647 ~ 5291030 (+)
LOC122326643 oxct1b,LOC107703571,LOC107591691,LOC107681133,LOC108439614,LOC107711896 coding downstream 157037 5308926 ~ 5314409 (+)
c7b c7,c7b,LOC107681132,LOC107706508,LOC107703570 coding downstream 163124 5315013 ~ 5322097 (+)
htr1ab htr1ab,htr1a,LOC107589255,LOC107703504,LOC107681135,LOC107706510,LOC107708525,LOC107591737 coding downstream 186467 5338356 ~ 5340138 (+)
LOC122326722 NA non-coding upstream 37273 5111482 ~ 5114284 (+)
G143926 slc26a1,LOC107589247,LOC107706495,LOC107681097 non-coding upstream 45331 5103857 ~ 5106226 (+)
LOC122326250 NA non-coding upstream 75954 5070327 ~ 5075603 (+)
LOC122326855 NA non-coding upstream 83757 5034930 ~ 5067800 (+)
G143887 NA non-coding upstream 258470 4891138 ~ 4893087 (+)
G144007 NA non-coding downstream 175341 5327230 ~ 5328405 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding downstream 214303 5366192 ~ 5374922 (+)
G144081 LOC107708509 non-coding downstream 386311 5538200 ~ 5539464 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding downstream 480152 5632041 ~ 5632851 (+)
G144129 NA non-coding downstream 532939 5684828 ~ 5685097 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 123511 4947584 ~ 5028046 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other upstream 239741 4899490 ~ 4911816 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other upstream 406291 4730603 ~ 4745266 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other upstream 442116 4705157 ~ 4709441 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other upstream 627377 4511926 ~ 4524180 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other downstream 349214 5501103 ~ 5506433 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other downstream 350144 5502033 ~ 5517936 (+)
sdhaf1 sdhaf1 other downstream 354657 5506546 ~ 5508393 (+)
G144077 NA other downstream 356776 5508665 ~ 5510746 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 580551 5732440 ~ 5735137 (+)

Expression


Co-expression Network