G144077


Basic Information

Item Value
gene id G144077
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5508665 ~ 5510746 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU212863
GGAAGAACAAGCTATGTAAACAGGAAGACCTTGCCAGTGCTGTGTCAAAAGCAAACAACGAAAATGAGCGTTTAAATTCATAGTTTGCttgttaataacaataatctcGCACGATAGTTACACGCGTTCAATTTATTCTACAACGAATATGGCGGAGGCCAACGGGATGACGGATGCCCAGTTGATTCAGAAGCTGGCTCTCCTGGGCTGGCTGAAGACGGACAGTGTTCAGTGTAAGGAGCTGCTCGCTGCCCTCACTGGGATGCAGGTGGCCCGGGAGCTTCTGGACAGACTGTCCGGGCAAAGCCAGGTAGACGCTTACAAGAGGGAATGTATCCAGAGCATAGCTGACTATGTGAAGAAGAATCCCAGGGCTTCTCAGCGAGAGCTCAATGCCGAGGTTGAGAAGAACGTGCTGCTGTTTGCCTCAAGAGTTCAGGCACTAGACGCCAGCCACTGACCAAAATATACATCTCCTTATCATTTCTGTAAGCCTTTTTTGTATGCTGACATAATACACCGATCATGTTTTCTTAATAATCGTGAATAATTCAACACGCCTGCCTTGTTTttcatgtactttttttttatacatattttcacCTATGTTTAAACTATAAGATTTTAATCTTAGATTTCAAACCTGAAATAAAAGTGCTCGTATCCAATCATGTCCAGTCTTGTGTGATTAAAGTGCGTCATACACATATAACGTTGAACGACGTCGCGTTCGT

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:0044087 regulation of cellular component biogenesis biological_process
GO:0008154 actin polymerization or depolymerization biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0051493 regulation of cytoskeleton organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0007015 actin filament organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0051258 protein polymerization biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0030041 actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032535 regulation of cellular component size biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212863 True 734 TUCP 0.44 3 5508665 5510746

Neighbor

gene id symbol gene type direction distance location
LOC122326433 LOC107589295,LOC107681110,LOC107706452,LOC107703460,LOC107591721 coding upstream 9072 5489878 ~ 5499593 (+)
itpkca itpkca,LOC107706518,LOC107589262,LOC107681162,LOC107703557,LOC107591683,LOC107708494 coding upstream 18903 5482487 ~ 5489762 (+)
ccdc61 ccdc61,LOC107681161,LOC107706517,LOC107589261 coding upstream 26884 5475234 ~ 5481781 (+)
lifrb NA coding upstream 34256 5466514 ~ 5474409 (+)
rictorb rictor,rictorb,LOC107681152,LOC107589259,LOC107703559 coding upstream 42278 5443111 ~ 5466387 (+)
rtn2b rtn2,rtn2b,LOC107706456,LOC107703556,LOC107708513 coding downstream 13834 5524580 ~ 5530203 (+)
b9d2 b9d2,LOC107589303,LOC107706523,LOC107681120,LOC107573061,LOC107703500 coding downstream 113137 5623883 ~ 5626040 (+)
tgfb1b LOC107681095,LOC107706521,LOC107589304,LOC107703499,LOC107754964,LOC107573058 coding downstream 116262 5627008 ~ 5631309 (+)
LOC122326807 LOC107742230,LOC107703498,LOC107573064,LOC107735684 coding downstream 135696 5646442 ~ 5647335 (+)
LOC122326971 or125-7,LOC107573644,LOC107719003,LOC107703451 coding downstream 141563 5652309 ~ 5653238 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 133743 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 180260 5327230 ~ 5328405 (+)
G143937 NA non-coding upstream 356776 5151557 ~ 5151889 (+)
LOC122326722 NA non-coding upstream 394381 5111482 ~ 5114284 (+)
G143926 slc26a1,LOC107589247,LOC107706495,LOC107681097 non-coding upstream 402439 5103857 ~ 5106226 (+)
G144081 LOC107708509 non-coding downstream 27454 5538200 ~ 5539464 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding downstream 121295 5632041 ~ 5632851 (+)
G144129 NA non-coding downstream 174082 5684828 ~ 5685097 (+)
G144130 NA non-coding downstream 194794 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 282118 5792864 ~ 5794604 (+)
sdhaf1 sdhaf1 other upstream 272 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 2232 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 480619 4947584 ~ 5028046 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other upstream 596849 4899490 ~ 4911816 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other upstream 763399 4730603 ~ 4745266 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 221694 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 225167 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 284016 5794762 ~ 5799702 (+)
G144152 NA other downstream 337195 5847941 ~ 5849053 (+)
G144330 NA other downstream 1023354 6534100 ~ 6535794 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018859 sdhaf1 coding NC_007132.7 CM002905.2 21339311 ~ 21347380 (+)
grasscarp (Ctenopharyngodon idella) CI01000006_06974359_06976736 NA misc CI01000006 null 6973224 ~ 6976872 (-)