CI01000001_12873759_12874041



Basic Information


Item Value
gene id CI01000001_12873759_12874041
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 12873448 ~ 12874215 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000001_12873759_12874041.mRNA
ATATTCAACCAATTAAATAACAAGACTCAAAGACAATACACACCAAAGACCCTAGTAACCAAATACATGGTGCTAAGGCTATGCACTCTGGTGGCAAAAGAAGAACCAGGATGTGACATGTTCCAAGTGGCTGCATTTGGCAGGCGAGCTGCTGATGAAAGAGAAGGAGACAGGTACGGTGCTTCAGCGGGGAGTGTGAGTCGACTTTTAGCTAAGGAAATCTAGTACGGTAAGTCTAAAAAAAGTTTGCATTTTACAAAATACTCAATAGGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000001_12873759_12874041.mRNA False 273 mRNA 0.42 2 12873759 12874089

Neighbor


gene id symbol gene type direction distance location
CI01000001_12814416_12815426 IRAK1BP1 coding upstream 58315 12814336 ~ 12815444 (+)
CI01000001_12718151_12726821 TBX18 coding upstream 146425 12717924 ~ 12727334 (+)
CI01000001_12657571_12666609 NA coding upstream 206380 12657571 ~ 12667379 (+)
CI01000001_12633655_12648702 NA coding upstream 224643 12633198 ~ 12649116 (+)
CI01000001_12602382_12613489 CABLES2A coding upstream 259821 12601961 ~ 12613938 (+)
CI01000001_12912442_12919516 SH3BGRL2 coding downstream 37525 12911614 ~ 12919991 (+)
CI01000001_12926362_12928572 RPS12, RGD1561102, RPS12-PS2, RPS12P4, GM4925, RPS12.S coding downstream 51325 12925414 ~ 12928579 (+)
CI01000001_12991367_12993048 NA coding downstream 117187 12991276 ~ 12993443 (+)
CI01000001_13002416_13005974 NA coding downstream 128125 13002214 ~ 13006033 (+)
CI01000001_13011184_13014251 TBPL1 coding downstream 135330 13009419 ~ 13014262 (+)
G19796 NA non-coding upstream 38598 12831908 ~ 12835161 (+)
G19792 NA non-coding upstream 47708 12821606 ~ 12826051 (+)
G19783 NA non-coding upstream 63048 12799634 ~ 12810711 (+)
G19756 NA non-coding upstream 127451 12745990 ~ 12746308 (+)
G19718 NA non-coding upstream 295834 12577514 ~ 12577925 (+)
G19769 NA non-coding downstream 721 12874810 ~ 12877091 (+)
G19813 NA non-coding downstream 9694 12883783 ~ 12883989 (+)
G19758 NA non-coding downstream 46916 12921005 ~ 12924201 (+)
G19825 NA non-coding downstream 55723 12929812 ~ 12930207 (+)
G19826 NA non-coding downstream 61658 12935747 ~ 12942304 (+)
G19395 NA other upstream 1191942 11681322 ~ 11681817 (+)
G19314 NA other upstream 1315086 11501194 ~ 11558673 (+)
G19039 NA other upstream 2019776 10850924 ~ 10853983 (+)
CI01000001_10538498_10539667 RPS26 other upstream 2333913 10538388 ~ 10539846 (+)
G18937 NA other upstream 2397370 10474984 ~ 10476389 (+)
CI01000001_13514115_13517063 NA other downstream 639315 13514115 ~ 13517063 (+)
CI01000001_12580225_12599311 NA coding upstream 146905 12579974 ~ 12599587 (+)
G19717 NA non-coding upstream 169073 12577205 ~ 12577419 (+)
G19704 NA non-coding upstream 191028 12555099 ~ 12555464 (+)
G19702 NA non-coding upstream 194034 12552027 ~ 12552458 (+)
G19910 NA non-coding downstream 109627 12988183 ~ 12989922 (+)

Expression



Co-expression Network