G144317 (LOC107703481,LOC107551613)


Basic Information

Item Value
gene id G144317
gene name LOC107703481,LOC107551613
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 6497701 ~ 6537141 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU213228
actttttttttttttcttttttctttttttttttttttttttttgttcAGTCATGTtcatatgcttttatttagttaattggagacatttataaaaagacaacaaagcAGTTTTAATACAGGCAAGATACATGAATACAAGATTTGAATGCGGCATGCAACAGATCAGGTTAGATTTTCATTAATGTTTACATCACTGCTATACATCACCACCGCAGTCAGTAAGCCATTGCGTCATCTTTAATAGACTATTAAAAGTCGCGATGGATTAAAAATCCATTGAACACAGCTGACATGCTTTTGGGCATTTGCTTGCCAGTACTTTTTGTGAAAGGCTCAATCCATACATTGTCATTTTTAGTTAGTTGAAGCACAGCTCCACCTGACACAACAGCTGATGATGATCGTGGGTTTAAGTCACAGAAATTCAGGCTGTTCACTTCATTCctgttatttttaagtcttAGGCATAATTGTCCTTCAGATGACGCATGAAACACAAAGTAATACACCCCAGGAACCTTGCAAGTGAATTTGCCAGTTCTAAGGTTGAAATCATTATCAACATTGCTAAGTTCTTTATCAAAGTCCACAGGCTGACCATATGAAGCCAAATTTGCTGTGTTTCGCAGCACAGAGAAAGCTggctttttatttgcattgccTCCACTGCCATCACTGCCACCACTGGATCCTCTAGGACCCTTAGGACCAGGGATACCTTTTAGTCCTTGTGCACCTATGAAACCCTTTGGACCAGGTTCTCCTGGAGAGCCTCTGATTCCCGTCTCTCCTTTGAGTTCCTGCATTGTGATACTGCTCAGTTTATCCTGTAAT

Function

NR:

description
PREDICTED: complement C1q subcomponent subunit A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213228 True 836 lncRNA 0.39 2 6497701 6537141

Neighbor

gene id symbol gene type direction distance location
chek1 LOC107548125,LOC107681196,LOC107706535,LOC107551636,LOC107719013,LOC107703487 coding upstream 36764 6456674 ~ 6460937 (+)
capslb capslb,LOC107706465,LOC107548122,LOC107682731 coding upstream 99396 6395659 ~ 6398305 (+)
lmbrd2b lmbrd2b,LOC107681180,LOC107548170,LOC107551632,LOC107703539 coding upstream 102087 6386242 ~ 6395614 (+)
nadk2 nadk2,LOC107681150,LOC107548165,LOC107703540,LOC107551628 coding upstream 127160 6363254 ~ 6370541 (+)
myo7ab myo7a,myo7ab,LOC107706532,LOC107681153,LOC107718980 coding upstream 143936 6329293 ~ 6353765 (+)
arhgap42a arhgap42,LOC107703530,LOC107551641,LOC107718960 coding downstream 8930 6546071 ~ 6568023 (+)
birc2 birc2,LOC107703529,LOC107731450,LOC107718959,LOC107551643,LOC107548174,LOC107681145 coding downstream 48572 6585713 ~ 6593962 (+)
ddias LOC107731438,LOC107681101,LOC107603284,LOC107718991 coding downstream 70612 6607753 ~ 6610753 (+)
pcf11 LOC107681148,LOC107731451,LOC107548175,LOC107718956,LOC107551645,LOC107703528 coding downstream 73862 6611003 ~ 6620143 (+)
alg8 alg8,LOC107731443,LOC107719005,LOC107703477,LOC107548176,LOC107551646 coding downstream 87790 6624931 ~ 6628770 (+)
G144308 LOC107706534,LOC107548126,LOC107681195,LOC107703486,LOC107719012,LOC107551634 non-coding upstream 34768 6462650 ~ 6462933 (+)
G144212 NA non-coding upstream 435021 6062424 ~ 6062680 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding upstream 566816 5929769 ~ 5930885 (+)
LOC122326140 NA non-coding upstream 703097 5792864 ~ 5794604 (+)
G144130 NA non-coding upstream 790866 5705540 ~ 5706835 (+)
G144347 LOC107731449,LOC107681146 non-coding downstream 68340 6605481 ~ 6606030 (+)
G144348 NA non-coding downstream 69706 6606847 ~ 6607346 (+)
G144353 NA non-coding downstream 85323 6622464 ~ 6623576 (+)
G144351 NA non-coding downstream 99982 6637123 ~ 7018763 (+)
G144370 NA non-coding downstream 159568 6696709 ~ 7085923 (+)
G144152 NA other upstream 648648 5847941 ~ 5849053 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other upstream 697999 5794762 ~ 5799702 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other upstream 755796 5735913 ~ 5741905 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other upstream 762564 5732440 ~ 5735137 (+)
G144077 NA other upstream 986955 5508665 ~ 5510746 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other downstream 45605 6582746 ~ 6585034 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other downstream 1370323 7907464 ~ 7909027 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other downstream 1670662 8207803 ~ 8211125 (+)
si:dkey-183i3.6 NA other downstream 1679834 8216975 ~ 8221572 (+)
G144746 NA other downstream 2030894 8568035 ~ 8568673 (+)

Expression


Co-expression Network