G144353


Basic Information

Item Value
gene id G144353
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 6622464 ~ 6623576 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU213290
GGTACAGTAGCTGTAATCAGTTTGAAAAGCATCTTGAGTACATACCTGCAAGATATCTTATTGTCTCTAGCTTGAGTGATTCCAGGAGGGTTTTCAAAGAGGCAACCTGTATGTCTATTTTCTTTGAGGTTTCCACGGCTTCACTTTCTATATctgcattcttTTTTTTGGAATTCTGTTTTAACGTCCATAAGTTTCTTCTCTTGTTCTgtaaactggaataaaaaaactttttttttttttacaatgaaagCATTCAAAGATAATACAAACTTAAACAagtaatatatacacataccaTGTCTGTAACTCTACTTCGCTCCAAATTAATGTCTAACTTTGCATCTGCTCTGATTTTATGGCTTTCTTCCTTCagtgtaaacataaaaatataaatagaaaaacaatggcaataaaaagtgcaaaatagtTTATCAAATTCACATAAATTCCTAAAGTACTTCTACTCACCAGTAGACTGTTCTTTATTTGTTCCAGctctattttcattttctgcatgtGAAATAATTGAGAAGATAAATCACCAAATAACACTGTCTACGACACATggtgttaaattaataatactacTTTGTACAGCCAACAACAAATTATGAAATACAGGTTTCAACTTTATTCTTACTGCATTTTCGGACCGTAAATTGGCAAATTCACTCTTCTCCAGGATAACCATGTCTTTCCTGATAGCATCTAGATGAGCCATGATTTGCTGTAGAGCTATTTCCTAGGCTGATGGGCTCCGGTGACCATGTCTCTGTATACAATATCCATATTGGCTGAAGTAAGAGTCACCAATGCAGTGACGATCACCTCTGCCTGTCTCTTTTCAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213290 True 854 lncRNA 0.34 3 6622464 6623576

Neighbor

gene id symbol gene type direction distance location
pcf11 LOC107681148,LOC107731451,LOC107548175,LOC107718956,LOC107551645,LOC107703528 coding upstream 2321 6611003 ~ 6620143 (+)
ddias LOC107731438,LOC107681101,LOC107603284,LOC107718991 coding upstream 11711 6607753 ~ 6610753 (+)
birc2 birc2,LOC107703529,LOC107731450,LOC107718959,LOC107551643,LOC107548174,LOC107681145 coding upstream 28502 6585713 ~ 6593962 (+)
arhgap42a arhgap42,LOC107703530,LOC107551641,LOC107718960 coding upstream 54441 6546071 ~ 6568023 (+)
bud13 si:dkeyp-69c1.6,LOC107703532,LOC107718963 coding upstream 93909 6524949 ~ 6528555 (+)
alg8 alg8,LOC107731443,LOC107719005,LOC107703477,LOC107548176,LOC107551646 coding downstream 1355 6624931 ~ 6628770 (+)
htr3b htr3b,LOC107548134,LOC107681116,LOC107731437,LOC107551604,LOC103041566 coding downstream 91429 6715005 ~ 6720847 (+)
htr3a htr3a,LOC107731461,LOC107681109,LOC107548135,LOC107719004,LOC107703474,LOC107551655 coding downstream 98590 6722166 ~ 6727215 (+)
LOC122326099 zw10,LOC107703521,LOC107731459,LOC107718948,LOC107551653 coding downstream 285982 6909558 ~ 6915682 (+)
LOC122326102 dlat,LOC107731458,LOC107718949,LOC107703522,LOC107681164 coding downstream 292580 6916156 ~ 6924635 (+)
G144348 NA non-coding upstream 15118 6606847 ~ 6607346 (+)
G144347 LOC107731449,LOC107681146 non-coding upstream 16434 6605481 ~ 6606030 (+)
G144317 LOC107703481,LOC107551613 non-coding upstream 85323 6497701 ~ 6537141 (+)
G144329 NA non-coding upstream 88885 6532040 ~ 6533579 (+)
G144308 LOC107706534,LOC107548126,LOC107681195,LOC107703486,LOC107719012,LOC107551634 non-coding upstream 159531 6462650 ~ 6462933 (+)
G144351 NA non-coding downstream 13547 6637123 ~ 7018763 (+)
G144370 NA non-coding downstream 73133 6696709 ~ 7085923 (+)
G144367 zbtb16 non-coding downstream 75416 6698992 ~ 6736633 (+)
G144371 LOC107731460,LOC107603286,LOC107681181,LOC107718946 non-coding downstream 79326 6702902 ~ 7091450 (+)
G144366 NA non-coding downstream 108494 6732070 ~ 6796946 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 37430 6582746 ~ 6585034 (+)
G144330 NA other upstream 86670 6534100 ~ 6535794 (+)
G144152 NA other upstream 773411 5847941 ~ 5849053 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other upstream 822762 5794762 ~ 5799702 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other upstream 880559 5735913 ~ 5741905 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other downstream 1283888 7907464 ~ 7909027 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other downstream 1584227 8207803 ~ 8211125 (+)
si:dkey-183i3.6 NA other downstream 1593399 8216975 ~ 8221572 (+)
G144746 NA other downstream 1944459 8568035 ~ 8568673 (+)
tmsb NA other downstream 2054715 8678291 ~ 8679513 (+)

Expression


Co-expression Network