anapc13 (anapc13,anc13,LOC107756075,LOC107693524,LOC107561055)


Basic Information

Item Value
gene id anapc13
gene name anapc13,anc13,LOC107756075,LOC107693524,LOC107561055
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 7907464 ~ 7909027 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU213572
CAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTTGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttga
>TU213573
CAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTGTAATGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttga
>TU213574
CAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTTGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttgatataaataaataaaatgcttcaaatgtaaaattctgcTCGCACAGTTAGCATTCTTACAATTCACAcagatttaaaattataaatcataccttctttttccaga
>TU213575
TGAAGACACACCAGAAATGAAAATACGTGAGGTTAAAAGCCTCGTAGAGGCAGTCCTTCTGCTCGCACTGTAGCAACACAAACTGACGCAGCCAATAGAGACTTACTTCCTCACAGCGCGAGCCCGTTTCTTGACATCTCATTGGACAGATGCGGGATCTGGTCATGGCGTTAGTGATAGGAAGCGCAACTCCTTTTTGCGACTCGGTTCTTTTGAACAGTTCGTCTAGAAGAACCGATGGAAAGCAGATTCAAAGATTCTTTGACATAATTACGTGATTGTAACGAAGCACACGTCTCGTGCGTCGTGACGTTCTCGATTGgcttttattatgaattattatcgtcgttattgttattgcatttaaatctgCCCCAGTCCAGCTTGACATATTTCAGTCATTTAGAACATATATTTCTCTCTGAAAAGTTTTGTTGCGTTTTAGTAAAAGTGCTAAACTTATTCCATTACGTTTTGTTTGTAACAATTCTATTACGATTCACGTGCTTTTTGAACCGATTCAACAGAATCAATGAAAAGGTCCGTTCACAAACCGTACACCGCTGGTATGGCGTTAATTTACAAATGAATCAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTTGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttga
>XM_043221983.1
AAACCGTACACCGCTGGTATGGCGTTAATTTACAAATGAATCAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTTGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttgatataaataaataaaatgcttcaaatgtaaaa
>XM_043221984.1
ACAAACCGTACACCGCTGGTATGGCGTTAATTTACAAATGAATCAAAGTCTATAAAAGAAGCGTCGCGATTACTCAGTTTCGTTAACTAAAGCGCATCGAGATTACTATAAAAATAGCTGACACGATATGCAGGTAGAAAGGGGCTAACGAATAGGAGATGTCGTCATCAGAGAGCGACATAACAACAAACCGTAGCGCTGGGCTGAAGACTGCTCGGGTCTCTGCTACTGTAATGTGGTGATGGACAGTGAAGTGCAGAGGGACGGAAGAGTTCTCGATCTCACAGATGATGCCTGGAGAGAAGACAGACTGCCGTACGAGGATGTCACGATCCCACTGagTGAACTTCCAGAAGCAGAGCAAGACAACGGCGGATCAACGGAGTCAGTCAAAGAGCAGGAGATGAAGTGGTCAGATCTCGCCCTGCAGAGTTTGCATGAAAACACCCCAAACATCGGCACTTAGATGTGAGGATGCTCCGTCCATGTGTCTGTGAACCATGTAGAAGATTTACGACGCGAAAGACTCATTTCCTGATTACGAGCCGGTGTAATTTGCATTAAAgtgtttcattgttttgatataaataaataaaatgcttcaaatgtaaaa

Function

symbol description
anapc13 Predicted to be involved in protein K11-linked ubiquitination. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC13 (anaphase promoting complex subunit 13).

NR:

description
anaphase-promoting complex subunit 13 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213572 False 535 TUCP 0.47 3 7908055 7908923
TU213573 False 539 TUCP 0.47 3 7908055 7908923
TU213574 False 639 TUCP 0.44 3 7908055 7909027
TU213575 True 1126 TUCP 0.44 3 7907464 7908923
XM_043221983.1 False 607 mRNA 0.45 3 7908014 7908954
XM_043221984.1 False 613 mRNA 0.45 3 7908012 7908954

Neighbor

gene id symbol gene type direction distance location
cadm1a LOC107756106,LOC107693522,LOC107715321,LOC107548188,LOC107703515 coding upstream 43552 7630051 ~ 7863912 (+)
LOC122326095 igsf9b,igsf9bb,LOC107756109,LOC107715325 coding upstream 724622 7104872 ~ 7182842 (+)
LOC122326105 LOC107551650,LOC107703526,LOC107731455,LOC107718953,LOC107548182 coding upstream 856366 7047937 ~ 7051098 (+)
LOC122326102 dlat,LOC107731458,LOC107718949,LOC107703522,LOC107681164 coding upstream 982829 6916156 ~ 6924635 (+)
LOC122326099 zw10,LOC107703521,LOC107731459,LOC107718948,LOC107551653 coding upstream 991782 6909558 ~ 6915682 (+)
jam3b jam3,jam3b,LOC107669398,LOC107561060,LOC107548190,LOC107693528 coding downstream 211045 8120072 ~ 8148977 (+)
zgc:171740 zgc:171740,LOC107669372,LOC107548192,LOC107693518,LOC107756077,LOC107561056,LOC107715329,LOC108279333 coding downstream 242076 8151103 ~ 8158831 (+)
dixdc1b dixdc1,LOC107756111,LOC107715327 coding downstream 250073 8159100 ~ 8182749 (+)
ddx10 ddx10,LOC107756113,LOC107693530,LOC102796765 coding downstream 274330 8183357 ~ 8203286 (+)
si:dkey-183i3.5 si:dkey-183i3.5,LOC107756078,LOC107548194,LOC108427914,LOC107693514 coding downstream 302361 8211388 ~ 8216313 (+)
G144371 LOC107731460,LOC107603286,LOC107681181,LOC107718946 non-coding upstream 816014 6702902 ~ 7091450 (+)
G144370 NA non-coding upstream 821541 6696709 ~ 7085923 (+)
LOC122326110 NA non-coding upstream 839470 7059929 ~ 7067994 (+)
G144363 NA non-coding upstream 860672 7045061 ~ 7046792 (+)
G144351 NA non-coding upstream 888701 6637123 ~ 7018763 (+)
G144587 NA non-coding downstream 78593 7987620 ~ 8048741 (+)
G144598 NA non-coding downstream 240368 8149395 ~ 8149616 (+)
G144652 LOC107567170,LOC107669366,LOC107715333 non-coding downstream 321226 8230253 ~ 8249704 (+)
G144648 NA non-coding downstream 404954 8313981 ~ 8316239 (+)
G144649 sms,LOC107700049,LOC107669379,LOC107548201,LOC107715334 non-coding downstream 408101 8317128 ~ 8317447 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 1322430 6582746 ~ 6585034 (+)
G144330 NA other upstream 1371670 6534100 ~ 6535794 (+)
G144152 NA other upstream 2058411 5847941 ~ 5849053 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other upstream 2107762 5794762 ~ 5799702 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other upstream 2165559 5735913 ~ 5741905 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other downstream 298776 8207803 ~ 8211125 (+)
si:dkey-183i3.6 NA other downstream 307948 8216975 ~ 8221572 (+)
G144746 NA other downstream 659008 8568035 ~ 8568673 (+)
tmsb NA other downstream 769264 8678291 ~ 8679513 (+)
G144775 ankhd1,LOC107715358,LOC107700026,LOC107669344,LOC107756155 other downstream 796234 8705261 ~ 8709686 (+)

Expression


Co-expression Network