si:dkey-183i3.6


Basic Information

Item Value
gene id si:dkey-183i3.6
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 8216975 ~ 8221572 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU213688
tgtttctatATAAAACTGAAAGCATTCAAAATCCGCATTATTTAACCGAACAATATTAACTGTTATCTTATGAATAGTCATGATAGAAAGATCAAAAGGAAGGAAATGTTATAGGcgtgatattttattttcacagacTGTCATCGACAAACAGGCCGaatagtaagatttttttttttttttttttacaatttgggatgttcaatttattttctgtggtaaggtttttttaaaaatgtatccaaaaTTTGTATCGATATTTGTTTCCAAACAGGCGAGACCCAGTGGAGTTATCAAAACCTCCCAGATGGTACGATTCATCACCATTGCGATCATAACACGTTACTTTTGACGAAAGCCATTCGTTAAACACAAAcagtaatgcatgtttttgtctcTGCAGTAGAAAAGGGCATCTTGGAACCAACatatgtgtgagtgtttttatattgttttgttaaaaaaaaattgtaagatTTTACATAAGCTAAGCTTGCTCAAAATTATTTGTACATTCTGTAtttcatacacatacatgtttgTCTTTTGTATAGAGACCCAATTCCAAATTCACTTTATGCAAACGAGGATGACACaggtaaataaatgtgtgctgaTAATTGTCATGGTCTAATGCAACCATTTCATACAGTTCACTCTCTTCAGTTGCTCACAGGAAAAATGAGGTCAAGTGACATGTTAACCTGACCACCAGAAAACCTGTAAACATGTGAGAAAACtgtagatgaaaaaaaaaagatcataaaactgaaaaagcgTTCATGGATGTGATTAACTGCACAAATTAACAAAATGCTTGAATCAGTGGTTTTAATTATATGCTTATTTAAATTTAGACACAGGAACATACGAGAATGTTTTTCCAACATCAGAAGTGCGGCATGACTCAGGTTGGTGTTGGTGACTGTTATTAGTTCAGAAAAACTTTCTTTCATGAAGGACTCAACGGGTAGATAACATTCagtatgtaattaataattcagtatgtatatgtgtgggtgggtgtatgcatgtgtacatatatatatatatatatatatatacacacacacatgcatacaagtggtttattcatttgtgtgttattttgttattacttCTATCAATTCTATTCAAAGTAACTAGTTATTAtagaaaaaatttttttacttttaaatagtaaaatagaCTTGATCTACATTAAATGTGAGTATTAAGATTaagagcattttttattttacttggcattttaagaaaaatgtttctttgcttttttttttcagatagcTGTAATTATGAAAACTGGGACAATAGATATGAGGATGGTAATGTGTTCAATATTCAACCAATAACAcggataaaacattttaatttgttaataacaaatttttttttttcccctttcctcTTTATTTAGATGAACCAGACTACGTGAATGACGTCAGAAAGTGAATaggaacctttttttttttttttttccaaacaggaAACAAAATTATGTTGTTTGTTCTAATTTTGAACTTGctttttctcaaaaacaaaacaatgaaacataCCGAGACATTTTGCCTGGaaacaagaccaaaaaaaacaaaaaaaaaaaacaaacaaacaaaaaaaaaaaaaaaccgaagaaaagcatttttacgGTGTTGAAATTACTgttattaaatcaaatgttaaaaagtctACTGCTTGACTTTTGAAGTGTTCAGTTGAGTGGAAATGTGCAGTCAGCTCTTCTGAtcaataaacaattaattaacTGTCAATTAATGAGTAAGTGTATAAACTACAAGACctctaaaatattttgcacAACAAAAGGCACTGAACATGAGGGACACACGTCGAGATGGGCgattgaaaaaggaaaaaacctCACCAGTTTCAGAGGTGTGACAAATGAGTCAGATGAGTATTCTGCCCTTTACATTACAAGTGAAACAAAAAGCTATCAGTGCAAGACTTTAAGCCCACatcatatacaaaaaaaaaccatgtcATCAGCTCTTGATAATGCTTCTCTCCCTCGCGCTAAAATTGTCACTGGCATCATCAGCTTGACGTTAAACCCGTCATAACATTCTGCAATACTATTTCTGCCATATGGTAAGATCTATTGCATTATAAAGCACTCTGACACCAAACACAGGCCATCactcacaaaaaaacattttattactgcAATTTGTCATATATTCAGTTATTAGTATTGCTACTTGTTCTGGAGATTAGGAACAATGAGGCTGAAGTATGAGCATGTGATGATCTCTTATCTTTAGCTTGCGTCAGGCGCAGCCGTCTTGCTGCACAGGCGACCCAAGAGCCCTGCCATCTGTAACAGAGAGTTCACTCCTTCTGCCACTTTCATATGCGTGTAGCCAAT
>XM_043221914.1
AGCAATTGCTTTAGAAAACGGCAGCtctaatgttaactaataatgttaatgaattgatttttttattgtgaaattttatttcaatatttataaatataaataaatgaatctaaatAATGCTTTCCACATCTTGTCAAACAAATATACCCTATTCAAACAAGCTTTATTTACAACAACTGACCAATGAGCGGCACAATGTACTAGCAAAAACGATAAAACCcaacataaacacataaaggatgtaaaacaggagaaaaaaacaccacaagTAGCGGGCTAAAGAGAAAAGATAATGATCACACATACACATCTTACACGTGCACTATTTTATCACATCACGTGCACTGAATTCAGTTACATCATAGCAGGTTTTATATAAGTATATCTCAAAACAGGTCCTTGGCAAGTGTAACAGCATTGTTGTTGTAAGAAAACAATCTTCACAAAACGCTTAAAAAGCGGAAAACATACCCACACACCACCTACAGACTCCAAATGTCAAAAACCCTAAATAATGACACACCATCCTGGCATTCACAAAACTACACCTCACAGCCATTAACTAGCCTTCGTCAGCTTCGATAGAGCCTCTGAGAGTTTATGCTTGAAACACCCAGCTTTCGATTCTCTCCTTCGTATCACTCTGCTGTTTGAAGACACAAAAAAACGGGTTCTACGGTGCTTATTGCGACAGTTTGTCACCAAGTGCTAATGAAAGGGCTGCATTTCAAAGGTTTCGACAGGCAGCGAGCAGTCTTGTGCGTTGCTGTGGGTTTGTGGGGGTCTCTTTCTTGGTGTCCGGCACGGTGCTGCACGGATGTGGTTAGATTCAGTTTAAACAGGAAACACAAAGCTTCATTCCGCTCTCATTAGTCCTTCACTCGACTTCAAGCGCGAGATGAAGTGAAAGGCCCAATCTCACAAAAGGCATGATTGAAGTCCAAAGCCAGCAAGGAGTTGTCCTTGCCATTATTTCCGTGCTCTCCCTTGGTTGTATTTATGCTCTCTGTCTGTGCTGCGGAAAGAAATCAAgtaTGCAACAAGAGGACAACGACCTGTATGACCAAGATGAtttcagTCAGGACAGTGAATATGCTGAAAGCAGAAAACATAAACCAGCGCTAAGACCGAACCAATCAAAGATGCCTTCAACCTCAAGacTGTCATCGACAAACAGGCCGaataGCGAGACCCAGTGGAGTTATCAAAACCTCCCAGATGTAGAAAAGGGCATCTTGGAACCAACatatgtAGACCCAATTCCAAATTCACTTTATGCAAACGAGGATGACACagACACAGGAACATACGAGAATGTTTTTCCAACATCAGAAGTGCGGCATGACTCAGatagcTGTAATTATGAAAACTGGGACAATAGATATGAGGATGATGAACCAGACTACGTGAATGACGTCAGAAAGTGAATaggaacctttttttttttttttttccaaacaggaAACAAAATTATGTTGTTTGTTCTAATTTTGAACTTGctttttctcaaaaacaaaacaatgaaacataCCGAGACATTTTGCCTGGaaacaagaccaaaaaaaacaaaaaaaaaaaacaaacaaacaaaaaaaaaaaaaaaccgaagaaaagcatttttacgGTGTTGAAATTACTgttattaaatcaaatgttaaaaagtctACTGCTTGACTTTTGAAGTGTTCAGTTGAGTGGAAATGTGCAGTCAGCTCTTCTGAtcaataaacaattaattaacTGTCAA

Function

NR:

description
uncharacterized protein LOC110537601

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213688 True 2389 lncRNA 0.33 2 8219136 8221572
XM_043221914.1 False 1747 mRNA 0.38 12 8216975 8220955

Neighbor

gene id symbol gene type direction distance location
si:dkey-183i3.5 si:dkey-183i3.5,LOC107756078,LOC107548194,LOC108427914,LOC107693514 coding upstream 662 8211388 ~ 8216313 (+)
ddx10 ddx10,LOC107756113,LOC107693530,LOC102796765 coding upstream 13689 8183357 ~ 8203286 (+)
dixdc1b dixdc1,LOC107756111,LOC107715327 coding upstream 34226 8159100 ~ 8182749 (+)
zgc:171740 zgc:171740,LOC107669372,LOC107548192,LOC107693518,LOC107756077,LOC107561056,LOC107715329,LOC108279333 coding upstream 58144 8151103 ~ 8158831 (+)
jam3b jam3,jam3b,LOC107669398,LOC107561060,LOC107548190,LOC107693528 coding upstream 67998 8120072 ~ 8148977 (+)
LOC122327001 sycn,LOC108180718,LOC101886091 coding downstream 3270 8224842 ~ 8227856 (+)
gng8 LOC107567170,LOC107669366,LOC107715333 coding downstream 8681 8230253 ~ 8232122 (+)
tmem45b tmem45b,LOC107693520,LOC107756119,LOC107548139,LOC107715332,LOC107669365,LOC107576539 coding downstream 10878 8232450 ~ 8235411 (+)
or92a1 or132-1,LOC107756079,LOC107548140,LOC107548141,LOC107700000,LOC107756126,LOC107699998,LOC107548143 coding downstream 68973 8290545 ~ 8291516 (+)
LOC122326967 or132-5,LOC107548141,LOC107700000,LOC107756127,LOC107699998,LOC107756126,LOC107548143 coding downstream 74457 8296029 ~ 8297237 (+)
G144598 NA non-coding upstream 67359 8149395 ~ 8149616 (+)
G144587 NA non-coding upstream 168234 7987620 ~ 8048741 (+)
LOC122326110 NA non-coding upstream 1148981 7059929 ~ 7067994 (+)
G144363 NA non-coding upstream 1170183 7045061 ~ 7046792 (+)
G144366 NA non-coding upstream 1420029 6732070 ~ 6796946 (+)
G144652 LOC107567170,LOC107669366,LOC107715333 non-coding downstream 8681 8230253 ~ 8249704 (+)
G144648 NA non-coding downstream 92409 8313981 ~ 8316239 (+)
G144649 sms,LOC107700049,LOC107669379,LOC107548201,LOC107715334 non-coding downstream 95556 8317128 ~ 8317447 (+)
G144669 NA non-coding downstream 97913 8319485 ~ 8321247 (+)
G144671 cnksr2b,LOC107756121,LOC107603291,LOC107669300,LOC107700045,LOC107715253 non-coding downstream 103449 8325021 ~ 8326762 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other upstream 5850 8207803 ~ 8211125 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other upstream 307948 7907464 ~ 7909027 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 1631941 6582746 ~ 6585034 (+)
G144330 NA other upstream 1681181 6534100 ~ 6535794 (+)
G144152 NA other upstream 2367922 5847941 ~ 5849053 (+)
G144746 NA other downstream 346463 8568035 ~ 8568673 (+)
tmsb NA other downstream 456719 8678291 ~ 8679513 (+)
G144775 ankhd1,LOC107715358,LOC107700026,LOC107669344,LOC107756155 other downstream 483689 8705261 ~ 8709686 (+)
gng3 gng3,LOC107559409 other downstream 603128 8824700 ~ 8828505 (+)
si:dkey-175m17.7 si:dkey-175m17.7,LOC107700009,LOC107715380,LOC107669312,LOC108428051,LOC107567921,LOC107568295 other downstream 839902 9061474 ~ 9080108 (+)

Expression


Co-expression Network