XLOC_000679 (wu:fc75a09)


Basic Information

Item Value
gene id XLOC_000679
gene name wu:fc75a09
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 52754085 ~ 52763447 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001150
ATGCCACGTCCGGTTAAAGAAATGCAGATGAGGACTGTTCCGAGAAAACTAAGAACTATACATGATCTCCAAATGAGTCGATTTGGTAAGCCGTGGCCCAAACACGGACTCCAGCTCTTATACTGGTTTGTGAAAGAGTGCATTTGGGAAAACGACGACGAAATGTTCCTGGCGTGCGACCCGACGACAGGAATCTTTGGCTTTCACCCCTTTGAGAACAGAAGCAACGACCGCAACGAGAAACTTCTTCCAGACATAGATTCATCATACTATGTGGTCGGGAATCTGTATTCGCCTCAAGCAAACATGTTGAAGGATTACGTGAAAAAAAATAAGTACGTCCAGAATGATCTCCAAAACACAGACCGCATCATCGTCACCACCACGCAACAAAAGCAGTGTTTTGGGAAAATATACGCAACCACACACAAAGATAAGTTTGATTACGACCCGAACGACACATTTCACATCTCAAGGAGCCTCCTGAAGAGCATCCAATCATTTGAGAGTGTTGAAGATTTTCTGAGGAGCGTTGGAGATGGTGAAGTCTCTTATCAGATGTGTTTGGTAGCGATGGTTCGAgtgcatgatgatgatgatgatgatgatgattcggACTTAAAAGATGAGATGAAATCAAAGAGCAGCGCCGCTGATCATGCTGATACTGATAGTGAGAGACCGCTGCGAAACTGTGGCTGCACCATACTCTGAAAATCCTTTTGAGAGTAAAAGGGAGTTCAAAAGTACACTGGAAAGTCAAGGGTGTGGTTTTTACATGCTTTTTAATCGCGCTTGCTAGATTAGTTTAGAATTTCCAATAGCATCTGGCTACATGCAATCttaaacactttcgcatgtcgagatgttcatgatatgtgtgtgtgctggcgctcacgggcacacgcaaagcttgaaggtaaacaaacaacggattatcataaacattttatcgataattatttacacagttagcattaagaaggaacatagaaacgttatctgactaacatctagcagctaaatgtgtctggaaaaatattcaaagacttttattctcataaaccgcgcgcacgtgaatgcgtctgactgttctgattggctaaagtagacgtctcacgtcagcacattctagacgtgTACGTgctctaaagcctgatttatacttctgcgtcaagtgaccggcgtaactcacggcgcaggcaacgcgcgtggctgtgcatttatacttctgcgcgctgtctctgtcagtctgcattaacacttccgaaacgctagttggcagtgaggtgtaaatgttcctctgtgtcgagtttcttcgctacttttttgcatttcctgaacacttcctgtatgtacaagtggctcaaactagctcattttgaggcaggaaccggcggacgtgcaacaactttaactatgaggtaaacacaaaacaaaactttccatccggagctcattcacggtactccacacttgtaaacaatcgctcgcgcggcgtcgcgccattcgcgcggctctcagtcccgcccagactcgtcagtgctaccaagccgaccaatcacagagcttgcactacgcgtcgttgcgacgtgtagttacattttttgagaggtgcacgtcagtgacggcaatggccacggcgaagggctatgcgtcagcgccgtagcatacgccggtgtttgacgcagaagtataaatcagccttaacacgcAGCCACGCCCCCTGGGTCACAGATTTCGACGGTCACAGAATATGGTGTAAcaccggcaatcttccttctgcattcacacagcgcagcattccagcaaattaccggtaatgttacaacttctttttCCGGAATATAGCCAGAACGattttaccggtattttcaaaaagggcctgttcacacatacaacctttccggaaaattgccggtaattttccgaaaaggtctgtatgtgtgaaaggggctttagggtgctttcacacctacacttttgtttcggaacgtgtctcgattgcccagttagcgcggttcgtttggcaatcaccatcaaaccaccacctctcctgacagtttagcgggacgctgcaaaataaaccccgacactctgaccaatgtgaggagagtttactcgcacgtgacttgttttagctcttttggtccgattagaaactttgcaatgtgaaagccaaccgctccaagagcaaagagcaacaatgtaacaattgtaatctctgtttcggaacaactgaatcgattcacaagtgtgaaagcacccttagacacaTGCACTCAATAGAGCTGATGACATCGTTGTGAGGAGGAGGTAGggcaaagtccctttaaagctgcctttccactgcatcTGACAAACGAcagactggaagtcattcatttttaaaggagagtagtccgggagttccgatcatctctgtATGCGGAAAATTCAGGCCTGATTTAAGCTGCGGATACACAGATTACTAAACCAAAAAACTTTAGTTTTTAAGTGTAGCTGGTTCATTTAAACGTACAGAcgtcaagctttatgtggatatatttatgtcgtataaacattttttatttttattttttttaatatacgaAAGTTAGAATATATAATCACAGTATGTTAACAAGAAATCAAAGAGACAAAAAGAgcaacaattttggaaaaagaaacaacaacagataacaaaaaaataaacaaacaaacaacaaaaaaacaggaggggtaaatacattacaagttaaagaaaaagattatataatttacaaatttcagttgtttttaaagcctttttgtaaAAGAGTTAGACACTGTTTCAAAGTAATACTGCATTTCAgtaagcaaaatataaaaaaaaggtttttggtttgaaaatttacatttatggatgtaaaattttgttaataagacaagaagattaagaaaatatgttttctttttatgtaaagcCCCCGTTCCATAattaacaaaaccaaataaaacattcTCCCACAGCAAGGAAAATTCCTCATCAACATTCTCAATTATAAAAAGTGAGAAGTCTTTCCAAAGCAACCTAGAGTAATTGCATTGCCAAAATAAGTGAACCAGGGACTCAGGGTGCTGCCCACAAAATGTCGTATCTAAGTTTGGTCTGAGCTTCTCCCctggagaaacgtcagtctatagcgatcgatgattggctgctgtactagtaggcggggcttcattttcCATATTGATCATTACAATTTTCCCCATTGAAAACTATGAGTGACACGTCctgtgtattctagagtctttgggTAGGGTTAAGTATATGCAtgaaaagcattgcatgcagtctTACCTTGTATTTGCACCCGGTTTGCATCCAGACCTTTCTCAGAATTTCGTCAGACAGTAGGcctgttttaaactttttttgttttttttgttttagcaatAGTCTAGAATTTCTGCACTgactttaagctaattttattttattagcttaGCAACAATGATTTATTCATATGGACTCAACCAGTTATGTATCAAACAAAGCATGTAACCCGACACATTTATTCTTTTGACATAATTAGGCAATGATTCTTAGAGATGCATggctataaataaaatacaagactacaattttttttgtctgagtatttattaaaataaatttacttttAAGGTTGGCCgaacagtggctcaatggttagcactgtagcctcacagcaaggtcactggtttcagTCCCagttgagtcagttggcatttctgcgtggagtttgcatgttctccccatgttggtgcgAGTTTCCTTGCTCCGACttgctccacagtccaaacacatgcactataggggaattgaataagctaaattggctgtagtttatacggaattagttggcggttcattacgttgtggcgacccctgataacaaagggactaagccgaaagaaaatgaatgaatttttaaggtcacactttaaaataaaggtttCATTTGTCGAATGtagttactaacatgaacaaataatgaacaatgttTGAGCAGAATTTAATAAtcagtttaaaatttaaaattcacACTTGTTAAGATTACAATTTTAACCGTTTCTTAATCATTCACtgcacaaaaacatgcaaataacaaCACtactgaacaaaaaaataattaaatttgatCAATGATACATAACAATCCTCCAGAAGacactattaattttatattaatattaataaattaataaatgttttgcatAATTTGTTCCTTTTAGTAAATACATCCACATTAACTAATATAACCTATTTAAAAGTTTACACAACAATTTACAATATGTTTAAAGTTGATCAAAATGTTCATAATTACATGTTTAAAGTtgctaaaaattaaaaatgctaataattccTGTGTGTGTTAAAGTCGTCAAAAGTAAGAACAGAGACTCAGATTCAAAGAAATGAGCCTGGAAATGGATTAATTGTTGTCTTCAGCAAAGCTCTGGTTCCGTCTGAACAGAAGTGCTTTTTAACAATGTGAGCAGAATGAATTGGAATTTGACCTTGCAGATTAGTTTTGGCCTTGAAGGGTCTTATCAGCTTGTGCGAGACTATACAGATGTCCTCTTtaggaaataaagagaaaaaaactaaaccaaCATCACCAtcatctgctctccattaaaaaAAACTCAGAACAAAAATTAAAAGGAAATATTAGATACAATATAAAGCTATGAAAAAAAATGAGAGAGCACTTGTTAATtcagaaaatgtcatttttatggAAGTAGTATATATGGGATTTCGAAAATGCTGTTGATATTTTTCAGTGTCTAtaatgtctgataacatttcttctaAATTTTATTGTCAgagcattttttaaatcatttgtcAGAATAACCAAAGTTTTCATTCGTTGTGATTGCGAAAGAGAGATTTTCACACCAAAATGCTGACTTCATGACTCTTCTGAAGCTAAATACTGATGCTGtattatcttaaaaaaataacataaaccttttttatattcaaaaatgatctaaatcacatttttatttaaaatttggaagaaatgttatcacCAGTAGAGGGTTTAGTACAgaataaaaatcacattttaccCACTTAAATGGAAACAGAAAGAATCAGAGAATTTTCAAATGGCCTCTTTCAGGCCTttcacgatatatatatatacacacacacacacacacacatacatacacatatatatatatatatatatatatatatatatatatatatatatatacatacactgtatacacacacacacacacatatatatatatacatacacatatatatatatatacacacacacacacacacacacacatatatatatatatatatatatatatatatatatatatacat

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-4139 No description available

Ensembl:

ensembl_id ENSDARG00000111625

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001150 True 5371 mRNA 0.37 2 52754085 52763447

Neighbor

gene id symbol gene type direction distance location
XLOC_000678 CABZ01021532.1 coding upstream 17960 52735484 ~ 52736125 (+)
XLOC_000677 osbp coding upstream 55022 52662203 ~ 52699063 (+)
XLOC_000676 slc44a1a coding upstream 101922 52632856 ~ 52652163 (+)
XLOC_000675 abca1a coding upstream 125678 52560549 ~ 52628407 (+)
XLOC_000674 tacr3l coding upstream 215568 52518176 ~ 52538517 (+)
XLOC_000680 smarca5 coding downstream 28992 52792439 ~ 52820954 (+)
XLOC_000681 NA coding downstream 44185 52807632 ~ 52807843 (+)
XLOC_000682 inpp4b coding downstream 165738 52929185 ~ 53225121 (+)
XLOC_000683 BX957281.1 coding downstream 458411 53221858 ~ 53271128 (+)
XLOC_000684 NA coding downstream 502953 53266400 ~ 53278288 (+)
XLOC_000673 BX323839.1 non-coding upstream 243329 52495043 ~ 52510756 (+)
XLOC_000667 NA non-coding upstream 385887 52363402 ~ 52368198 (+)
XLOC_000668 NA non-coding upstream 386508 52365030 ~ 52367577 (+)
XLOC_000666 LO017718.1 non-coding upstream 390978 52353162 ~ 52363107 (+)
XLOC_000665 NA non-coding upstream 407186 52345955 ~ 52346899 (+)
XLOC_000686 NA non-coding downstream 556712 53320159 ~ 53320674 (+)
XLOC_000687 NA non-coding downstream 557484 53320931 ~ 53321338 (+)
XLOC_000689 AL935166.1 non-coding downstream 601063 53364510 ~ 53368034 (+)

Expression


Co-expression Network