LOC122326009 (LOC107756128,LOC107548142,LOC107699997)


Basic Information

Item Value
gene id LOC122326009
gene name LOC107756128,LOC107548142,LOC107699997
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 8304787 ~ 8305755 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220683.1
ATGGCTGGCTCTAATGGCACAGCTGAGGATGTACCTTTCATTTATCAGCAAATCTTTAAGGTAGAAATGGATGCTGGGCCCAGTGCTAAAATTTCAGTGCTTATGTTAATTtctctgttattatttttcataaactgTGTGATGTTCTTTGCCCTGAGAAGCAAGCGTGTATTCCATGAGACGCCGCGCTACATTCTTTTTGGCCACATGCTAATGAATGACTCTGTGCTTTTGCTTCTCACAACTGTCATGTACACTATGGGTACGTATTACCTTCAATTAACCAGAGCCATCTGCACGCTGTTAGTCTTTGTCTCCTACTGCACTTTCCGTAACGCTCCTCTGACACTAGCACTGATGTCTCTGGAGAGGTACGTGGCGATCTGCTTCCCTCTGAGACACTGCAACATCGCCACACCAAAAAGGACTGGAGTCGCCATAGGAATCATCTGGCTCCTTAgttctattaatattataacagaCATTATTGTTGTGTTAATTATCAATCCAGGTttatttgtagaggttttattttgcacacaagaaaaactgtttttattcaaatggcAGATAGATAAATCTCAAGGGTTTGACgttctttattttgtgtctgtTGCAGTGATCATTATTTTCACATACATTAGCATCATGATCACAGCCAGGTCTGTTTCGTCTGATAAAGATTCTGCTAAGAAAGCCCTTAAAACAGTGCTCTTGCACCTGATTCAGCTGGGACTGTGTCTCACCTCTTTCCTGTATGCCACAATAAACAAAGCACTATACACAGTTTCTGACAGCTCTTCACTCTTCATAAATCTTAGATATCTGAACTTTCTTATTATTCTTATGCTGCCACGCTGTCTGAGTCCTCTGATCTATGGCATGAGAGATGAAGCCGTGTGgcctttattcaaatattatttctgcTATCGTTCAGGCAAAGTAAGGCCTTCTATTAATGTACATTAA

Function

NR:

description
PREDICTED: olfactory receptor 2M5-like isoform X1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220683.1 True 969 mRNA 0.40 1 8304787 8305755

Neighbor

gene id symbol gene type direction distance location
LOC122326925 or132-5,LOC107756126,LOC107548143,LOC107699998,LOC107548141,LOC107700000,LOC107756127 coding upstream 4615 8299198 ~ 8300172 (+)
LOC122326967 or132-5,LOC107548141,LOC107700000,LOC107756127,LOC107699998,LOC107756126,LOC107548143 coding upstream 7550 8296029 ~ 8297237 (+)
or92a1 or132-1,LOC107756079,LOC107548140,LOC107548141,LOC107700000,LOC107756126,LOC107699998,LOC107548143 coding upstream 13271 8290545 ~ 8291516 (+)
tmem45b tmem45b,LOC107693520,LOC107756119,LOC107548139,LOC107715332,LOC107669365,LOC107576539 coding upstream 69376 8232450 ~ 8235411 (+)
gng8 LOC107567170,LOC107669366,LOC107715333 coding upstream 72665 8230253 ~ 8232122 (+)
nlrc3l1 LOC107756123,LOC107700046,LOC107548199,LOC107715336,LOC107567173,LOC107669395 coding downstream 52684 8358439 ~ 8363243 (+)
ovol1b LOC107756082,LOC107548147,LOC107699993 coding downstream 94107 8399862 ~ 8403323 (+)
LOC122326276 LOC107715339,LOC107756134,LOC107548206,LOC107669405,LOC107700042 coding downstream 97807 8403562 ~ 8412570 (+)
sumf2 sumf2,LOC107756135,LOC107700040,LOC107548208,LOC107715344,LOC107669403,LOC107567178 coding downstream 114649 8420404 ~ 8423634 (+)
bicdl2l LOC107548209,LOC107756138,LOC107700039,LOC107567176,LOC107715341,LOC107669392 coding downstream 123061 8428816 ~ 8432907 (+)
G144652 LOC107567170,LOC107669366,LOC107715333 non-coding upstream 55083 8230253 ~ 8249704 (+)
G144598 NA non-coding upstream 155171 8149395 ~ 8149616 (+)
G144587 NA non-coding upstream 256046 7987620 ~ 8048741 (+)
LOC122326110 NA non-coding upstream 1236793 7059929 ~ 7067994 (+)
G144363 NA non-coding upstream 1257995 7045061 ~ 7046792 (+)
G144648 NA non-coding downstream 8226 8313981 ~ 8316239 (+)
G144649 sms,LOC107700049,LOC107669379,LOC107548201,LOC107715334 non-coding downstream 11373 8317128 ~ 8317447 (+)
G144669 NA non-coding downstream 13730 8319485 ~ 8321247 (+)
G144671 cnksr2b,LOC107756121,LOC107603291,LOC107669300,LOC107700045,LOC107715253 non-coding downstream 19266 8325021 ~ 8326762 (+)
G144651 NA non-coding downstream 57708 8363463 ~ 8363589 (+)
si:dkey-183i3.6 NA other upstream 83215 8216975 ~ 8221572 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other upstream 93662 8207803 ~ 8211125 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other upstream 395760 7907464 ~ 7909027 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 1719753 6582746 ~ 6585034 (+)
G144330 NA other upstream 1768993 6534100 ~ 6535794 (+)
G144746 NA other downstream 262280 8568035 ~ 8568673 (+)
tmsb NA other downstream 372536 8678291 ~ 8679513 (+)
G144775 ankhd1,LOC107715358,LOC107700026,LOC107669344,LOC107756155 other downstream 399506 8705261 ~ 8709686 (+)
gng3 gng3,LOC107559409 other downstream 518945 8824700 ~ 8828505 (+)
si:dkey-175m17.7 si:dkey-175m17.7,LOC107700009,LOC107715380,LOC107669312,LOC108428051,LOC107567921,LOC107568295 other downstream 755719 9061474 ~ 9080108 (+)

Expression


Co-expression Network