LOC122326095 (igsf9b,igsf9bb,LOC107756109,LOC107715325)


Basic Information

Item Value
gene id LOC122326095
gene name igsf9b,igsf9bb,LOC107756109,LOC107715325
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 7104872 ~ 7182842 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220786.1
TCAAGCCGCGTCTGGCTGCCGTGCGCTGGTGCAGGTGCTCTATTTCATCGAGAGAGGATGCGAAAGGAAAGAAGGGGAGGGAAAGAATGAAGGGAACCGTCGGAGAAAAGTATGCAGGGCAGGAATAAAAGGGTATCAGCAGCTGACAGTGTGTCTAACGTCCAGGGGCTCGGCTAAGAATGATTTATTGAAAGGGGCACTTTGAGATATGATGAGGTTTCTCTCTGGTTGGCAATAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTATTCAGCACCAGAGGAACAGCTGCTCAAGGTGCCCACGGAGTCAGAGAAGAGCCCCAGTTTGTGACGGCCCGCGCAGGGGAGACCGTGATTCTGGGATGTGACGTGGCCCACCCACTCAACGGCCAGCCCTACGTGGTGGAGTGGTTTAAGTTTGGAGTGCCCATCCCCTTCTTCATCAACTTCCGCTTCTACCCTCCTCATGTGGACCCCGAATACGCCGGCCGAGCCAGCCTGCATGGCAAGTCATCTCTACGCATTGAGAGGGTTCCGGAAGACCAGGGCTGGTATGAGTGCAAGGTCCTGATGCTGGAACAACAGTACCACACCTTTCACAACGGCAGCTGGGTGCACCTCACAGTCAACGCTCCCCCAACTTTCACGGACACACCACCCCAGTATGTGGAGGCCAAAGAGGGTGGCAGCATCACTCTGAGCTGCACGGCCTTCGGGAATCCCAAACCTTCAGTCAGCTGGCTCAGGGAGGGAGATCCTGTACAGGACAGCAGCAAGTATAAGGTGAGTGATGGCAGCCTGACGATCGTTTCCATCAGCCGCGAGGACAGGGGAGCGTACACATGCCGAGCGTACAGCGAGCAGGGAGAGGCCGTCCATACCACACGCCTACTCGTCCAAGGACCCCCATTTATTGTCTCACCGCCAGAGAACATAACCGTAAACATATCCCAGGATGCATTCTTCACTTGTCAGGCTGAGGCGTATCCTGGCAACCTAACGTACACCTGGTTCTGGGAGGAAGATAACGTCTTCTTCAAGAAtgATCTGAAGCGCAGAGTGAGTATTCTGATCGACGGTTCACTCATCATCTCCCAGGTGAAACCTGAGGATGCTGGGAAATACACCTGCAGCCCGAGTAACAGCCTTGGGCGCCCACCTTCTGCATCAGCGTACCTGACCGTGCATTACCCTGCCCGTGTGGTAAACATGCCGCCCGTTATTTACGTGGCCATTGGACTGCCGGGGTACATCCGCTGCCCGGTGGATGCCAACCCGCCTGTCACTTCAGTGAAGTGGAAAAAAGACGGCCTGCCTCTGCGGATAGAGAAGTACCCTGGCTGGAGCCAAATGGAAGATGGGAGCATTCGAGTGTCTGAGGTGACAGAGGACTCTCTCGGCACCTACACCTGCGTGCCTTACAATAGCCTCGGTACAATGGGACAGTCCCCTCCCGCCCCTCTGGTGCTAAAGGACCCACCCAAATTTCTGGTGGTTCCTGGAGGGGAGTACAGGCAGGAGGCTGGTCGAGAGCTGGTCATCCCCTGTGAGGCAGAAGGAGACCCATTCCCCAACATTACATGGAGAAAGGTAGGGAAGCCCAGCAGAAGCAAGCACAACGTCCTACCGAGAGGCAGCTTACAGTTCAAATCTCTCAGCAAGGAGGACCATGGGGAGTGGGAGTGTGTCGCCTCCAATGTCGCCACGAGCATCACTGCCAGCACGCACCTCCTAGTAATCGGCACAAGCCCACACGCCCCCGCCAAAGTCCACGTTTCGGTCTCGACGACCTCGGCCAACGTCTCGTGGGAACCCGGTTACGACGGCGGCTTTGAGCAGACATTCTCAGTCTGGTACGGCCATGTGGTGAAGAGGGAGCAGTTAGGACCGCATGACTGGCTGTCCATGCCTGTGCCCAGCGGGCAGCACTGGCTCCTGGTGCAAGGCCTGGAGCCCGAGACGGCCTACCAATTCAGCGTCCTGGCCCAGAACAAGCTGGGGACGGGCCCGTTCAGCGAGGTCGTCACTGTGAACACACTAGTATTTCCTATAAGTACCCCAGAACCACTGGTGCTGCTTACCCCACCACGGTGCCTCACAGCCAACCGGACACAGCAGGGAGTCCTACTCACATGGATCCCTCCAGCCAATCACACGTCGCCAATTGATCACTACATCATGGAGTTCCGCCTCGGGGAGAGGTGGGATGTTCTTGATGATGCAATCCCTGCTGGAGAGACAGAGCTATTGGCTAGAGACCTGGTTCAGGAGGCCTGGTATGAGTTCAGAGTGATGGCAGTTATGGAGGACCTTGTCAGTGAGCCCAGTAATGTAGTGGGAGTCTCTAGCACAGACTACTTCCCGCCGCCTGAGGTGCCAGACGAGGGGCTGGCGCGGCCGGTGGTGGCAGGCATTGTGGCCACCATCTGTTTCCTGGCAGCAGCCATCCTCTTCAGCACGCTAGCGGCCTGCTTCGTCAACAAACAGAGACGGCGTAAGCTCAAGCGGAGACGAGATCCCCCTCTGTCTATAACACACTGCAGAAAGAGCGTGGAGACTCCGAGTCCTCTTACCCCTCTACCTGGCATAGAACCCTACTGGGAAGGCCAGGAAAGGAGCAGCTACAGGCCTCCGCCCTCCAGTCCTCTATCATCTTCTGGAAAGGTTAGTCCAGAAAGTGTCCGCTCCATAGGACCTCCTTCAGAATCCTCAGAGGATGGTTTGCGAGCCAAGAAGTTTCCTCAAAGTCCTGCCAAGGAGAAGGAGCTGTCTTTATACAAGAAGACCAAGAGAGCAATAATTAGCAAGAAATACAGCGTCTCTAAGCACGAGGCGGAGGCTACCACGCCAATCGAATTGATTAGTCGTGGCCCAGATGGGCGCTTTGTCATGGAACCTACAGATGCGGAAACTCCAGTTAAGGCAAGGCGCATCGAGGGCTTCCCCTTCGTGGAGGAGTCTGACCTCTATCCTGAATTTCGACAGTCAGATGAGGAGAATGATGATCCGGGGCCCATGCCGCCTATGATGGCTACCCTCAGACCCCATCAGATCTCGCCCATTTCTTCTAGCCAGGAGTCTTACTTGCAGCCCCCAGCCTACAGTCCCCGCTTCCAGAGGCCCATGGAAGGCATGACTATCATGGAAACTAGTCGACTCCAGGCTACAGGACAGATTCGTGGTGCTCCTCACTTCCGAGCCTTTTCCCATGGCCAGTTCTACAGCTACTTGGGAAGTCCAGGGGAACCTGAGCCTCCGCCTCCCTTCTACATGCCAGACACCAGCCCTCTCAGCTCAGTAATGTCTTCTCCTCCTTACCACCTGGAGGACCTTTTCGGTCATCCCACCATCCCGGAGGAAATCGGTGAGGGAGAGATTCAGCATTATGCAGTCTCTGGCTACACCCTTCCCTTGGCTCACCCCTCCACCTCACGCTCTCCAGACATCTGGCAGCGACCCGATTTTACCTTTGCCACAATCGAGGGTCCTCACTTTATTTTTCCACCCCCCCACCCTTTGCATCTTCATCCGGAACCTCCCCTTCCTCCCCCTCTTGTTCTTCCTCCTAGTGCACTCCAGCCCTCTGCCCTTCAAGTATCTCCGTACCCTGGTATCCTGCAGCTGGAGGCCCCAAAGAGCCGCCCAGGCAAGTCTCCCAGCAAGGTCAAGCCTCAGGGCCTTCCAGCCAAGCGTTTACCTATGCAAGAGGCACAGAGTCTAGGGCAGCTAAGACACACAAGCCACGGTATGGGTGTACCGGTATTGCCTTACCCTGACCCGGTGTCTCACATGGTTGGCCCAAGCTCGTTTGGAAGCCTGGATACGCGATGGTACGAGCTTACACCCAGGCTTAGCCCAAGGCAGCCCCGCAGGATGGAGCCCGGCATGGTAGTTCTACAGCCTTCCCGCCTCTCTCCTCTAACTCAAAGCCCGATTAGCTCTCACGAAGGCTCACCGGAGATTGTAGTGCGCCCCAGGCCCCGTCCCAGTGTCATCCAACCCCCGATCCCTCCTGAGATGTCTGAGATCACTCTTCAACCTCCTTCTTCAGCTAGTTTCTCTAGAAGgtcctccccctcctcctctcctgcTCAAGGCCAAGGCAGCCGAAGGGCAAGTCCCAGCTACCGATCCCACATGGCATTTGCCACCTCAGCAGCAAGCTATCCGTCACAGTCCCCTTCACCTCCTGTAGAAAGCAGCAACATTTTCGGGCAGATGCCAACTCAGAGGAGGACTGAGGAGGAGATCCTTCCGTCAGAACCCTCTCCACCCCAGTTATCAGCTTCAGGCTATCTGGGCAGCGTTGTTGTGACCAGGTCCTCTACACCGCAATAGAAAACGTCGAGGTGCACCAAGTGGCTCTGCAGGGTCTGAGAGGATAGAAGCACTGAGATATCAACGAGTGAAAAA

Function

symbol description
igsf9b Predicted to enable cell adhesion molecule binding activity. Predicted to be involved in cell-cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cell-cell junction. Predicted to be integral component of plasma membrane. Is expressed in nervous system; optic vesicle; otic vesicle; and somite. Orthologous to human IGSF9 (immunoglobulin superfamily member 9).
igsf9bb Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Orthologous to human IGSF9B (immunoglobulin superfamily member 9B).

NR:

description
PREDICTED: protein turtle homolog B isoform X3

GO: NA

KEGG:

id description
K22656 IGSF9B; immunoglobulin superfamily member 9B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220786.1 True 4424 mRNA 0.56 22 7104872 7182842

Neighbor

gene id symbol gene type direction distance location
LOC122326105 LOC107551650,LOC107703526,LOC107731455,LOC107718953,LOC107548182 coding upstream 53774 7047937 ~ 7051098 (+)
LOC122326102 dlat,LOC107731458,LOC107718949,LOC107703522,LOC107681164 coding upstream 180237 6916156 ~ 6924635 (+)
LOC122326099 zw10,LOC107703521,LOC107731459,LOC107718948,LOC107551653 coding upstream 189190 6909558 ~ 6915682 (+)
htr3a htr3a,LOC107731461,LOC107681109,LOC107548135,LOC107719004,LOC107703474,LOC107551655 coding upstream 377657 6722166 ~ 6727215 (+)
htr3b htr3b,LOC107548134,LOC107681116,LOC107731437,LOC107551604,LOC103041566 coding upstream 384025 6715005 ~ 6720847 (+)
cadm1a LOC107756106,LOC107693522,LOC107715321,LOC107548188,LOC107703515 coding downstream 447209 7630051 ~ 7863912 (+)
jam3b jam3,jam3b,LOC107669398,LOC107561060,LOC107548190,LOC107693528 coding downstream 937230 8120072 ~ 8148977 (+)
zgc:171740 zgc:171740,LOC107669372,LOC107548192,LOC107693518,LOC107756077,LOC107561056,LOC107715329,LOC108279333 coding downstream 968261 8151103 ~ 8158831 (+)
dixdc1b dixdc1,LOC107756111,LOC107715327 coding downstream 976258 8159100 ~ 8182749 (+)
ddx10 ddx10,LOC107756113,LOC107693530,LOC102796765 coding downstream 1000515 8183357 ~ 8203286 (+)
G144371 LOC107731460,LOC107603286,LOC107681181,LOC107718946 non-coding upstream 13422 6702902 ~ 7091450 (+)
G144370 NA non-coding upstream 18949 6696709 ~ 7085923 (+)
LOC122326110 NA non-coding upstream 36878 7059929 ~ 7067994 (+)
G144363 NA non-coding upstream 58080 7045061 ~ 7046792 (+)
G144351 NA non-coding upstream 86109 6637123 ~ 7018763 (+)
G144587 NA non-coding downstream 804778 7987620 ~ 8048741 (+)
G144598 NA non-coding downstream 966553 8149395 ~ 8149616 (+)
G144652 LOC107567170,LOC107669366,LOC107715333 non-coding downstream 1047411 8230253 ~ 8249704 (+)
G144648 NA non-coding downstream 1131139 8313981 ~ 8316239 (+)
G144649 sms,LOC107700049,LOC107669379,LOC107548201,LOC107715334 non-coding downstream 1134286 8317128 ~ 8317447 (+)
cfap300 si:rp71-1p14.7,cunh11orf70,LOC107731447,LOC107548131,LOC107681129 other upstream 519838 6582746 ~ 6585034 (+)
G144330 NA other upstream 569078 6534100 ~ 6535794 (+)
G144152 NA other upstream 1255819 5847941 ~ 5849053 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other upstream 1305170 5794762 ~ 5799702 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other upstream 1362967 5735913 ~ 5741905 (+)
anapc13 anapc13,anc13,LOC107756075,LOC107693524,LOC107561055 other downstream 724622 7907464 ~ 7909027 (+)
LOC122326775 si:dkey-183i3.9,LOC107715278,LOC107669329 other downstream 1024961 8207803 ~ 8211125 (+)
si:dkey-183i3.6 NA other downstream 1034133 8216975 ~ 8221572 (+)
G144746 NA other downstream 1385193 8568035 ~ 8568673 (+)
tmsb NA other downstream 1495449 8678291 ~ 8679513 (+)

Expression


Co-expression Network