G12842



Basic Information


Item Value
gene id G12842
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 94121 ~ 94576 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU14257
TGATAATAGTATATAACAAATTGTAACTTATCTCGCACTCAGGGTCATCTAAACTATGCTGAGTTGCAGAGTTCAGCCTGAAACTTGTGATCTGTTGTACTCAGAAACCAATGCATGATAAAAGACAAAGTATGCAGGCATCAGCATAACTGCATCTTAATATTTAGGGGTTCAAGCACGTAGCGCTGAAACCAAATTGTAATTGTTAAAATTTCCAAGGATCAGCATTCACCCCAAAAAGTGATCAGGCAGACCAAACCCTAAGTCGCAGAGACTTGAAACTTTGAGGGCTTGTAGTATTCACACCGTCTACAACGTCACCAAGGCTCGCCCCGATTGGCCTGATGGGGGCACTACAATGGGCAAAAGTACAAAATGGCTAATAACTCTTAAACCGTTAGGCATAGGCTCAAGTGTCGTATATCATTGGATTCCTTGACTCAGGATGGACAAAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU14257 True 456 lncRNA 0.42 1 94121 94576

Neighbor


gene id symbol gene type direction distance location
CI01000001_00001500_00064341 CDH24 coding downstream 28545 708 ~ 65576 (-)
CI01000001_00105105_00108304 NA coding upstream 9679 104255 ~ 109844 (-)
CI01000001_00113458_00118362 NA coding upstream 17353 111929 ~ 118447 (-)
CI01000001_00124107_00131285 ELOVL4B coding upstream 28483 122814 ~ 131380 (-)
CI01000001_00192545_00195828 FAM46A.L, FAM46AB, FAM46A, FAM46AA coding upstream 97355 191931 ~ 196831 (-)
CI01000001_00218182_00220017 NA coding upstream 123081 217657 ~ 220116 (-)
G12841 NA non-coding downstream 35 93784 ~ 94086 (-)
G12830 NA non-coding downstream 1434 89684 ~ 92687 (-)
G12838 NA non-coding downstream 10449 83361 ~ 83672 (-)
G12844 NA non-coding upstream 2322 96898 ~ 97198 (-)
G12845 NA non-coding upstream 2762 97338 ~ 97819 (-)
G12846 NA non-coding upstream 4002 98578 ~ 98905 (-)
G12856 NA non-coding upstream 59391 153967 ~ 154280 (-)
CI01000001_00238241_00249437 NA other upstream 151429 238241 ~ 249437 (-)
CI01000001_00362143_00378213 NA other upstream 272666 361614 ~ 378213 (-)
G14104 NA other upstream 1669093 1763669 ~ 1771468 (-)
G14219 NA other upstream 1899634 1994210 ~ 1994898 (-)

Expression



Co-expression Network