LOC122326141 (aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728)


Basic Information

Item Value
gene id LOC122326141
gene name aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 3475983 ~ 3480494 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220834.1
GAACACTATCGActatcatcatcttcatcatcatcatcatcatcatcatcacaaatTAAAACATCCTTCAATCAACATCTTTAAACTATCATCTTTAAGACATTATGGGAAGACAGAAGGTGATCCTGGAAAAGATGTCTCGGATCTTTCAAGTTCGGAACATACTGATACGACAGGCTCTGGCAGAATGCCTGGGCACGCTCATACTGGTGATGTTTGGATGCGGTGCTGTCGCCCAGTTGATTCTAAGTGGAGGCTCTCATGGAATGTTTCTGACGGTGAATTTCGCTTTTGGGTTCGCTGCTACTTTGGGAATCTTAGTTTGTGGGCAAGTCTCAGgAGGTCACATAAACCCTACTGTGACCTTTTCCCTTTGTTTGCTGGGGAGAgagccctggaggaaatttccCGTATACTTCCTGGCCCAGACTCTGGGGGCTTTTCTTGGCTCAGGAATAATATTTGGCATGTATATTGATGCAATTTGGGACTATGGACAAGGTTCTCTAATTGTTATAGGGGACAATGCAACGGCTGGAATCTTTGCTACATATCCTTCTAAACACCTTACTTTGCTCAATGGCTTCTTTGATCAGATGATTGGCACGGCAGCTCTCATAGTTTGTATCCTCGCCATTGTGGACCCTTACAATAACCCCATTCCACAAGGACTGGAGGCCTTTACTGTGGGCTTTGTAGTCCTAGTGATTGGTCAGTCCATGGGTTTTAACTCAGGTTATGCTGTAAACCCAGCCAGAGACTTGGGACCTCGGATCTTCACAGCAATTGCTGGATGGGGTACAGAGGTGTTCTCAGCCAACTCTTACTGGTCCTTTGTACCAATCTTTGCCCCATTCATTGGCGCCATGTTTGGTGTGATGGTGTATCAGCTGATGGTGGGATACCATGTGGAAGGAGAAGCAAGAGATAAAAGGGAAACAgaggaaaaagaagagaagGAAAGACTCAAACTCTCTGCTGTTTCTGAGAAGGAGACAGCGTAAGTCTGGGATCAAATGGAGTTGTTTTCCCACAGTTCTGTTTAGCttctaaaatttaattttgctctCATGACAATATAGTAGCAATACTGTGTATCTTGTACCAACATTAAATCAAAACTTTTGACAGTTACCCTTGACATCATGATTAGACTCAAACtaattagttgtattttttgCAGTATGTGCGTAATTAGTTGATGTCCTAACAGTTTAATTGATGAAtcataatttgcatttatacataaaCTTACCAGTTATCCTTTCAGTTTATTCCAAAAAATGGTCAATCATAGCCAAATTAATTCATCCAATCTGCTAACAAGTCATTTGTTGTCACCCTTTCATTTATCTCTAATAGTTCTGCCtgcataatgaataattatgaataaGGGATATGATTTATGAAAACCTTCACCCTTATGAATACTGCATCAAAAGTACCTGTTCCGCTAATATTACAATTgaatatatcacaatattacaaGTGAATATTAATGAGTGTTGTAATTATGCAGTGAGAAACCCAGTCCTCTTTACATTATGTGGCTTTATGCCTTTTTGGAAACGTATCTATTGTCCAGATATGTTTTGATGTATCACATGCCTGTTTCTGTTCTGGTTTACACTGTTCAGGGTTTACACTGactatgcatataatatatcGTGTTCATTTGCTCTTCACTGTGTTcactgtgctttttaaaaataaacagcatttttggtAAAGCA

Function

symbol description
aqp3b Enables several functions, including arsenite transmembrane transporter activity; glycerol transmembrane transporter activity; and water transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in eye; gill; integument; muscle; and testis. Orthologous to human AQP3 (aquaporin 3 (Gill blood group)).

NR:

description
PREDICTED: aquaporin-3-like

GO:

id name namespace
GO:0015793 glycerol transport biological_process
GO:0034219 carbohydrate transmembrane transport biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0071918 urea transmembrane transport biological_process
GO:0015698 inorganic anion transport biological_process
GO:0006833 water transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015168 glycerol transmembrane transporter activity molecular_function
GO:0015204 urea transmembrane transporter activity molecular_function
GO:0015105 arsenite transmembrane transporter activity molecular_function
GO:0005372 water transmembrane transporter activity molecular_function

KEGG:

id description
K09876 AQP3; aquaporin-3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220834.1 True 1733 mRNA 0.40 6 3475983 3480494

Neighbor

gene id symbol gene type direction distance location
LOC122326952 NA coding upstream 137018 3336985 ~ 3338965 (+)
LOC122326784 ube2g1b,ub2g1,LOC107686891,LOC107595690,LOC106579958,LOC103152401,LOC106931442 coding upstream 146178 3326500 ~ 3329805 (+)
LOC122326816 NA coding upstream 181975 3291697 ~ 3294008 (+)
LOC122326343 LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914 coding upstream 499932 2966166 ~ 2976051 (+)
LOC122326342 NA coding upstream 511307 2957186 ~ 2964676 (+)
LOC122326336 vps29,LOC107595689 coding downstream 13490 3493984 ~ 3497228 (+)
gpn3 gpn3,LOC107686892,LOC107692302,LOC106563155 coding downstream 19151 3499645 ~ 3502742 (+)
arpc3 arpc3,LOC107737855,LOC107707141 coding downstream 22728 3503222 ~ 3505587 (+)
atp2a2b atp2a2b,atp2a2,LOC107708347,LOC107556944,LOC108444117 coding downstream 33539 3514033 ~ 3542738 (+)
bcr bcr,LOC107595694,LOC107679847,LOC107556943,LOC105889081,LOC105014833,LOC106566295 coding downstream 63749 3544243 ~ 3602480 (+)
LOC122326852 NA non-coding upstream 139294 3336261 ~ 3336689 (+)
G143578 NA non-coding upstream 160510 3315177 ~ 3315473 (+)
G143509 NA non-coding upstream 538366 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 612966 2862772 ~ 2863017 (+)
G143465 NA non-coding upstream 674635 2800730 ~ 2801348 (+)
G143590 NA non-coding downstream 8017 3488511 ~ 3492587 (+)
G143638 NA non-coding downstream 128425 3608919 ~ 3610050 (+)
G143656 NA non-coding downstream 271105 3751599 ~ 3752198 (+)
LOC122326834 NA non-coding downstream 282838 3763332 ~ 3769556 (+)
G143664 NA non-coding downstream 322964 3803458 ~ 3803769 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 155970 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 645627 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 1238788 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 1419304 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 2246928 1227998 ~ 1229055 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 220935 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 626307 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 651942 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1031432 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 1224663 4705157 ~ 4709441 (+)

Expression


Co-expression Network