p2rx4a (p2rx4,p2rx4a,LOC107737869)


Basic Information

Item Value
gene id p2rx4a
gene name p2rx4,p2rx4a,LOC107737869
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 2789507 ~ 2793545 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220862.1
accgtttttttttattgtgcggAAAACAGCAGCGTCGCCATTCCACTAAAAGCGGTTCTTGGccagaagggaaaaaaagggaaCCACCTTCTTTGCAAATCGTGAAAAAACtattaactatccctttaaaacgtCTTAAGAGGTGCGTGATCTTCAACCTCAGAAAGCGAAACGACATTTCAGCGGGAAGCGTGTAAAGTTTGGGTCGCGTTGAGGCGTCTTAGAAAGTCATTAACTCGCCGAACGTGTGCCTGCAAGTGAAcgggaagaaaaataaaagcgtaCTTTTTAATTCAAGCGATCATAATGAGCGAAAAAGGTTGCTGTGATTCAGTAGGTCAGTGTTTTTTCGACTACTACACTTCAAAAATACTGGTGATAAGAAGCAGGAAAGTGGGAACGTTGAATCGGTTCACTCAAGCTTTGGTCATAGCTTACGTCATCGGgtatgtgtgtgttcttaagAAAGGCTACCAGGACACGGACACCGTCCTCAGTTCTGTCACGACCAAAGTGAAAGGCATTGCTCTAACAAACACCAGTGAGCTGGGAGAAAGGGTCTGGGACGTGGCTGACTACATCATCCCACCTCAGGTAGTCCGTCGATTAGACGAAGAGGAGgAGGGTGGATCATTCTTTGTGCTGACCAATATGATCATCACCCCAAATCAAACGCAGTCGAAATGTGCTGAGAATCCGACCCTAGCATCCATATGCACTTCTCACAGGGACTGCAAAAGAGGCTTCAGTGATGCTCGTGGAGATGgtgTTCGGACTGGCAGATGTGTCCGTTACAATGACACAGTGAAGACTTGTGAAGTGCTGTCCTGGTGTCCTCTAGAGAAGACTGTTGATCCCCcaagTCCCCCGCTTCTGGCAGATGCTGAAAACTTTACTGTTCTCATAAAAAATAGCATTCGTTTTCCCAAATTTAACTTCAACAAAAGGAATATTCTACCAAATATAAATAGCTCCTACTTGACGCAGTGCGTGTTCAATCGTACGACAGACCCTGACTGCCCTATCTTCAGACTCAAAGACATTGTTGAAGAGGCTAAGGAGGATTTTCAGACCGTGGCAGTCCATgggGGAGTGATGGGAGTGCAGATCAGCTGGGATTGTAACCTTGACATGCCGCAGACCTGGTGTGTGCCTCTCTACACGTTCCGCAGATTAGACAACAAAGACCCTGAAAATAACGTGGCCCCCGGATACAACTTCAGATTTGCTAAATATTACAAGGACAGTAGTGGCGCAGAGACTAGGACACTTATCAAGGGTTATGGTATTCGCTTTGATGTCTTGGTATTTGGCCAGGCAGGAAAATTTAATATCATACCAACACTTCTGAATATAGGTGCTGGCTTGGCACTTTTAGGCCTGGTGAATGTTATCTGTGATTGGATTGTCCTGACATTTATGTCAAGAAAGCAACATTACAAAGACCAGAAGTATACATATGTTGATGACTTTGGACTTCCAACGAAGAAACATAGAAGATCTTCAGGCTACAGATTCAACACTAATTATACGCAAATGTAATCAGGAAGTTAATGTATTTCTCAGGTTTACAAAATGAACAGTATAGTCAATgcaatataatgaataaaaaatatatttggatGAAA
>XM_043220863.1
ccgtttttttttattgtgcggAAAACAGCAGCGTCGCCATTCCACTAAAAGCGGTTCTTGGccagaagggaaaaaaagggaaCCACCTTCTTTGCAAATCGTGAAAAAACtattaactatccctttaaaacgtCTTAAGAGGTGCGTGATCTTCAACCTCAGAAAGCGAAACGACATTTCAGCGGGAAGCGTGTAAAGTTTGGGTCGCGTTGAGGCGTCTTAGAAAGTCATTAACTCGCCGAACGTGTGCCTGCAAGTGAAcgggaagaaaaataaaagcgtaCTTTTTAATTCAAGCGATCATAATGAGCGAAAAAGGTTGCTGTGATTCAGTAGGTCAGTGTTTTTTCGACTACTACACTTCAAAAATACTGGTGATAAGAAGCAGGAAAGTGGGAACGTTGAATCGGTTCACTCAAGCTTTGGTCATAGCTTACGTCATCGGgtatgtgtgtgttcttaagAAAGGCTACCAGGACACGGACACCGTCCTCAGTTCTGTCACGACCAAAGTGAAAGGCATTGCTCTAACAAACACCAGTGAGCTGGGAGAAAGGGTCTGGGACGTGGCTGACTACATCATCCCACCTCAGgAGGGTGGATCATTCTTTGTGCTGACCAATATGATCATCACCCCAAATCAAACGCAGTCGAAATGTGCTGAGAATCCGACCCTAGCATCCATATGCACTTCTCACAGGGACTGCAAAAGAGGCTTCAGTGATGCTCGTGGAGATGgtgTTCGGACTGGCAGATGTGTCCGTTACAATGACACAGTGAAGACTTGTGAAGTGCTGTCCTGGTGTCCTCTAGAGAAGACTGTTGATCCCCcaagTCCCCCGCTTCTGGCAGATGCTGAAAACTTTACTGTTCTCATAAAAAATAGCATTCGTTTTCCCAAATTTAACTTCAACAAAAGGAATATTCTACCAAATATAAATAGCTCCTACTTGACGCAGTGCGTGTTCAATCGTACGACAGACCCTGACTGCCCTATCTTCAGACTCAAAGACATTGTTGAAGAGGCTAAGGAGGATTTTCAGACCGTGGCAGTCCATgggGGAGTGATGGGAGTGCAGATCAGCTGGGATTGTAACCTTGACATGCCGCAGACCTGGTGTGTGCCTCTCTACACGTTCCGCAGATTAGACAACAAAGACCCTGAAAATAACGTGGCCCCCGGATACAACTTCAGATTTGCTAAATATTACAAGGACAGTAGTGGCGCAGAGACTAGGACACTTATCAAGGGTTATGGTATTCGCTTTGATGTCTTGGTATTTGGCCAGGCAGGAAAATTTAATATCATACCAACACTTCTGAATATAGGTGCTGGCTTGGCACTTTTAGGCCTGGTGAATGTTATCTGTGATTGGATTGTCCTGACATTTATGTCAAGAAAGCAACATTACAAAGACCAGAAGTATACATATGTTGATGACTTTGGACTTCCAACGAAGAAACATAGAAGATCTTCAGGCTACAGATTCAACACTAATTATACGCAAATGTAATCAGGAAGTTAATGTATTTCTCAGGTTTACAAAATGAACAGTATAGTCAATgcaatataatgaataaaaaatatatttggatGAAA
>XM_043220864.1
ccgtttttttttattgtgcggAAAACAGCAGCGTCGCCATTCCACTAAAAGCGGTTCTTGGccagaagggaaaaaaagggaaCCACCTTCTTTGCAAATCGTGAAAAAACtattaactatccctttaaaacgtCTTAAGAGGTGCGTGATCTTCAACCTCAGAAAGCGAAACGACATTTCAGCGGGAAGCGTGTAAAGTTTGGGTCGCGTTGAGGCGTCTTAGAAAGTCATTAACTCGCCGAACGTGTGCCTGCAAGTGAAcgggaagaaaaataaaagcgtaCTTTTTAATTCAAGCGATCATAATGAGCGAAAAAGGTTGCTGTGATTCAGTAGGTCAGTGTTTTTTCGACTACTACACTTCAAAAATACTGGTGATAAGAAGCAGGAAAGTGGGAACGTTGAATCGGTTCACTCAAGCTTTGGTCATAGCTTACGTCATCGGgtatgtgtgtgttcttaagAAAGGCTACCAGGACACGGACACCGTCCTCAGTTCTGTCACGACCAAAGTGAAAGGCATTGCTCTAACAAACACCAGTGAGCTGGGAGAAAGGGTCTGGGACGTGGCTGACTACATCATCCCACCTCAGGTAGTCCGTCGATTAGACGAAGAGGAGgAGGGTGGATCATTCTTTGTGCTGACCAATATGATCATCACCCCAAATCAAACGCAGTCGAAATGTGCTGAGAATCCGACCCTAGCATCCATATGCACTTCTCACAGGGACTGCAAAAGAGGCTTCAGTGATGCTCGTGGAGATGgtgTTCGGACTGGCAGATGTGTCCGTTACAATGACACAGTGAAGACTTGTGAAGTGCTGTCCTGGTGTCCTCTAGAGAAGACTGTTGATCCCCcaagTCCCCCGCTTCTGGCAGATGCTGAAAACTTTACTGTTCTCATAAAAAATAGCATTCGTTTTCCCAAATTTAACTTCAACAAAAGGAATATTCTACCAAATATAAATAGCTCCTACTTGACGCAGTGCGTGTTCAATCGTACGACAGACCCTGACTGCCCTATCTTCAGACTCAAAGACATTGTTGAAGAGGCTAAGGAGGATTTTCAGACCGTGGCAGTCCATgggGGAGTGATGGGAGTGCAGATCAGCTGGGATTGTAACCTTGACATGCCGCAGACCTGGTGTGTGCCTCTCTACACGTTCCGCAGATTAGACAACAAAGACCCTGAAAATAACGTGGCCCCCGGATACAACTTCAGATTTGCTAAATATTACAAGGACAGTAGTGGCGCAGAGACTAGGACACTTATCAAGGGTTATGGTATTCGCTTTGATGTCTTGGTATTTGGCCAGGCAGGAAAATTTAATATCATACCAACACTTCTGAATATAGGTGCTGGCTTGGCACTTTTAGGCCTGGTGAATGTTATCTGTGATTGGATTGTCCTGACATTTATGTCAAGAAAGCAACATTACAAAGACCAGAAGTATACATATGTTGATGACTTTGGACTTTTAGCCAACGAAGAAACATAGAAGATCTTCAGGCTACAGATTCAACACTAATTATACGCAAATGTAATCAGGAAGTTAATGTATTTCTCAGGTTTACAAAATGAACAGTATAGTCAATgcaatataatgaataaaaaatatatttggatGAAA

Function

symbol description
p2rx4a Enables ATP binding activity; CTP binding activity; and extracellularly ATP-gated cation channel activity. Acts upstream of or within calcium ion transport. Is integral component of membrane. Part of ion channel complex. Orthologous to human P2RX4 (purinergic receptor P2X 4).
p2rx4 Enables several functions, including cadherin binding activity; identical protein binding activity; and ligand-gated cation channel activity. Involved in several processes, including cellular response to ATP; positive regulation of endothelial cell migration; and regulation of muscle system process. Located in cell junction; perinuclear region of cytoplasm; and plasma membrane. Is integral component of plasma membrane.

NR:

description
P2X purinoceptor 4-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0006812 cation transport biological_process
GO:0070207 protein homotrimerization biological_process
GO:0034702 ion channel complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0004931 extracellularly ATP-gated cation channel activity molecular_function
GO:0001614 purinergic nucleotide receptor activity molecular_function

KEGG:

id description
K05218 P2RX4; P2X purinoceptor 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220862.1 False 1628 mRNA 0.43 12 2789507 2793545
XM_043220863.1 False 1600 mRNA 0.43 12 2789508 2793545
XM_043220864.1 True 1631 mRNA 0.43 12 2789508 2793545

Neighbor

gene id symbol gene type direction distance location
gstt1b LOC107548781,LOC107661340,LOC107595683,LOC107737872 coding upstream 414 2786644 ~ 2789093 (+)
ddt ddt,LOC107736937,LOC107662822,LOC107737884,LOC107692330 coding upstream 3372 2784473 ~ 2786135 (+)
chchd10 chchd10,LOC107736936,LOC107692329,LOC107737885,LOC107662830 coding upstream 5482 2782348 ~ 2784025 (+)
smarcb1b smarcb1b,smarcb1,LOC107661349,LOC107736887 coding upstream 36654 2744887 ~ 2752853 (+)
LOC122326563 LOC107579035,LOC107736917 coding upstream 132747 2631096 ~ 2656760 (+)
idh3b idh3b,LOC107737870,LOC107736889,LOC107548787 coding downstream 143 2793688 ~ 2800500 (+)
ptpra ptpra,LOC107736890,LOC107737868 coding downstream 8601 2802146 ~ 2826909 (+)
gcnt4b.2 LOC107737880,LOC107595710,LOC107662521,LOC107733381,LOC107692321,LOC107736920,LOC107548763,LOC107692322 coding downstream 38206 2831751 ~ 2837249 (+)
LOC122326157 LOC107736921,LOC107595711,LOC107548780,LOC107737879,LOC107692322,LOC107733381,LOC107548763,LOC107595710 coding downstream 49160 2842705 ~ 2845216 (+)
fam169ab fam169ab,LOC107692296,LOC107548785,LOC107736892,LOC107737867,LOC107661277 coding downstream 52235 2845780 ~ 2861350 (+)
G143385 NA non-coding upstream 246200 2487403 ~ 2543307 (+)
G143349 NA non-coding upstream 299307 2426489 ~ 2490200 (+)
G143356 NA non-coding upstream 385417 2402747 ~ 2404090 (+)
G143354 LOC107595722,LOC107662860,LOC107739708,LOC107548798 non-coding upstream 389438 2399072 ~ 2400069 (+)
G143340 NA non-coding upstream 451037 2336781 ~ 2338470 (+)
G143465 NA non-coding downstream 7185 2800730 ~ 2801348 (+)
G143491 NA non-coding downstream 69227 2862772 ~ 2863017 (+)
G143509 NA non-coding downstream 136717 2930262 ~ 2937617 (+)
G143578 NA non-coding downstream 521632 3315177 ~ 3315473 (+)
LOC122326852 NA non-coding downstream 542716 3336261 ~ 3336689 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 552312 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 732828 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 1560452 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 1633365 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 1733582 1050838 ~ 1055925 (+)
gnrh2 LOC107595723 other downstream 35569 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 504445 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 907884 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 1313256 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 1338891 4132436 ~ 4386212 (+)

Expression


Co-expression Network