LOC122326157 (LOC107736921,LOC107595711,LOC107548780,LOC107737879,LOC107692322,LOC107733381,LOC107548763,LOC107595710)


Basic Information

Item Value
gene id LOC122326157
gene name LOC107736921,LOC107595711,LOC107548780,LOC107737879,LOC107692322,LOC107733381,LOC107548763,LOC107595710
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 2842705 ~ 2845216 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220871.1
TGGACAGAGATGGGATCCTGTAAAGCAGGTTTTGAATGACCTGTGCTTTTGTCTGTCACTGTGACATAAGTACTGTCGGTCTTTTGGAAAGCTGTCTAAATTCAGTTGTGTCTGGTGAGCTGAGCGTACTATTTAAGGAAAGGTGTAGCAAGTTTGTTTTTGAGGCAgttgtttacatgtttacaagaaaaaaagtttcGGAGTGGAATATTACGGTTTAGGATTATACGGTAAGTATTAATACGTTTATTTTTGTCAGATAATAAATTATGACGTTTAAGTTTAAGCATGACAGTAACGGTTATTTTAAAGgactaatcattttaatcatgatATTAAAAGTCTGAGAGActttgaatttctttaaaacattcaagAGAGACACCACTACACCACCATGATCGTGTTGATCTGATACAGGGTCGGGATTTTTGTTGGCGGAGCAAATATAGACAAAATGACTGGGAATACATATATAATGAAAAACTTGCGGCTCCACCTCAAACcgaaaaacatcttttttccttttttgggaCTGGCACTacttatatgttgttttttcgCATGTTTGACTGTAAATGAAAGAGGAAGGCAGAAAACCAGAGTGTTTGAGAGGCCGCTTCTGACAGCGCGATATGAAATTAATTGCACGGCGATATATGAAATGGAGCCGGTGGAATTGGGCAAAACTTTAGCCATTCGCAAGGAAAAAAGCTATACAGGGCCAGTCGATGAGGCTGTTGTGAATTCCACCTCTAACTGTGATCAGTTTGTGTCACAAGGCTATGGTATGATGGAAGGCTCTGAGTTTGAGCGTCAATTTCCTCTTGCTTATTCTTTGGTCGTTCACCAGGACGCTGCTCTTGTGGAGAGGTTGCTCAGAGCCGTTTATATGCCTCATAACATATATTGCATACATTACGATCTGAAGTCCTCAGATGACTTTATTTCAGCGATGAAAGGTCTGGCCCGTTGCCTCCCCAACGTCTTCATTGCTTCAAAGCTGGAGAGGGTGCAGTACGCCGGCTTCTCGCGACTCAAAGCCGATCTTAATTGCCTGTCTGACCTCCTCCATTCTGAGGTCAAGTGGAAGTATGTCATAAACCTGTGCGGTCAGGACTTTCCACTGCGGACGAACGCTGAGCTGGTGTCGGATCTAAAAGAGCTGCAGGGCAGGAACATGGTGGAGAGCAAGTGGCCTGGAGGAAAGCAATGGCGCTGGACTTACCATCACTTAGTGAAAGATAATAATTCACAGTACTACGGCTCACCTGTCACCACTTCTGAGAAGAAATCTCCACCTCCTCACAACATAGCCATGTTTGTGGGCAGCGCGTACTTCACACTTTCAAGAGAATTTGTGGCTTTTGTTAACCAGAGTTCTGTAGCCAAGGATTTCTTGGCTTGGACTGAGGATACGTACTCACCTGATGAACACTTCTGGGCAACTCTGGTCCGTGTGTCTGGAGTACCAGGAGAAGTGCCGAGTTCTGACCCTGAGATCTCAGAACTAGCAAGTAAAACCCGTCTGGTGAAGTGGTGGTCTTTAGAAGAAAGACTTTACCCACCATGCACTGGAGTCCATGTGCGAGAAGTGTGCATTTATGGCGCCGCTGAGCTCAGGTGGCTCCTGAACTACGGACACTGGTTCGCTAATAAAGTGGATCCCAAAGTGGATCCCGTTCTTATGGAATGTTTAGAAGAGATACTTTCAGAAAAACGGAGAGAAACAATGCATTCTCATTTTGGAGATCACTAATACTGGACGCCTAGATGTGTGTTGTAAGTTATTCTGTGTCGCCCCCTGCTGTGTACAAAAAAATGGCGCACGAGTTGGttcattaatgtattattgCATTGTTCATTATATTACGTTTGCAGATACAAATAAttgctaaaagtaaaaaaaaaaaatactaataaatgaatgaagtgCTCATTGCAGATTAACCTCAAATTTTAaggttatttatttgtatgtttgagtaaattattatgagttgtttttttttatattgaaattgtCTAGCAAAATAACCACATTAATAAATGACTTATCGTGGCTTTAAgttcaataaatacaaaagctaACTTGGTGGAAAAAAGAAGCGCAAGTCTCCTGTGCTACCCATCTGCATTCATGTGCATTGTTTTGTCTTAATGCAGCAGCATCAAACAATTTTGCTGCATGAATGTACAAATATTTGTCATGCTAATCAAGTAtcataaaactgaaactaatGCACGTAACGTGCGTATTATTAGGGAGGAATAAACTTAAGACGTTCAGTTAAGACCGCCATATGcagaacaaaattaattaagtGTGCTTATACTTTTAATTCTCAtatgtgtaattttaaaataatgtatattaaaatgttacgttttaatagta
>XM_043220872.1
TGGACAGAGATGGGATCCTGTAAAGCAGGTTTTGAATGACCTGTGCTTTTGTCTGTCACTGTGACATAAGTACTGTCGGTCTTTTGGAAAGCTGTCTAAATTCAGTTGTGTCTGGTGAGCTGAGCGTACTATTTAAGGAAAGGTGTAGCAAGTTTGTTTTTGAGGCAgttgtttacatgtttacaagaaaaaaagtttcGGAGTGGAATATTACGGTTTAGGATTATACGGGTCGGGATTTTTGTTGGCGGAGCAAATATAGACAAAATGACTGGGAATACATATATAATGAAAAACTTGCGGCTCCACCTCAAACcgaaaaacatcttttttccttttttgggaCTGGCACTacttatatgttgttttttcgCATGTTTGACTGTAAATGAAAGAGGAAGGCAGAAAACCAGAGTGTTTGAGAGGCCGCTTCTGACAGCGCGATATGAAATTAATTGCACGGCGATATATGAAATGGAGCCGGTGGAATTGGGCAAAACTTTAGCCATTCGCAAGGAAAAAAGCTATACAGGGCCAGTCGATGAGGCTGTTGTGAATTCCACCTCTAACTGTGATCAGTTTGTGTCACAAGGCTATGGTATGATGGAAGGCTCTGAGTTTGAGCGTCAATTTCCTCTTGCTTATTCTTTGGTCGTTCACCAGGACGCTGCTCTTGTGGAGAGGTTGCTCAGAGCCGTTTATATGCCTCATAACATATATTGCATACATTACGATCTGAAGTCCTCAGATGACTTTATTTCAGCGATGAAAGGTCTGGCCCGTTGCCTCCCCAACGTCTTCATTGCTTCAAAGCTGGAGAGGGTGCAGTACGCCGGCTTCTCGCGACTCAAAGCCGATCTTAATTGCCTGTCTGACCTCCTCCATTCTGAGGTCAAGTGGAAGTATGTCATAAACCTGTGCGGTCAGGACTTTCCACTGCGGACGAACGCTGAGCTGGTGTCGGATCTAAAAGAGCTGCAGGGCAGGAACATGGTGGAGAGCAAGTGGCCTGGAGGAAAGCAATGGCGCTGGACTTACCATCACTTAGTGAAAGATAATAATTCACAGTACTACGGCTCACCTGTCACCACTTCTGAGAAGAAATCTCCACCTCCTCACAACATAGCCATGTTTGTGGGCAGCGCGTACTTCACACTTTCAAGAGAATTTGTGGCTTTTGTTAACCAGAGTTCTGTAGCCAAGGATTTCTTGGCTTGGACTGAGGATACGTACTCACCTGATGAACACTTCTGGGCAACTCTGGTCCGTGTGTCTGGAGTACCAGGAGAAGTGCCGAGTTCTGACCCTGAGATCTCAGAACTAGCAAGTAAAACCCGTCTGGTGAAGTGGTGGTCTTTAGAAGAAAGACTTTACCCACCATGCACTGGAGTCCATGTGCGAGAAGTGTGCATTTATGGCGCCGCTGAGCTCAGGTGGCTCCTGAACTACGGACACTGGTTCGCTAATAAAGTGGATCCCAAAGTGGATCCCGTTCTTATGGAATGTTTAGAAGAGATACTTTCAGAAAAACGGAGAGAAACAATGCATTCTCATTTTGGAGATCACTAATACTGGACGCCTAGATGTGTGTTGTAAGTTATTCTGTGTCGCCCCCTGCTGTGTACAAAAAAATGGCGCACGAGTTGGttcattaatgtattattgCATTGTTCATTATATTACGTTTGCAGATACAAATAAttgctaaaagtaaaaaaaaaaaatactaataaatgaatgaagtgCTCATTGCAGATTAACCTCAAATTTTAaggttatttatttgtatgtttgagtaaattattatgagttgtttttttttatattgaaattgtCTAGCAAAATAACCACATTAATAAATGACTTATCGTGGCTTTAAgttcaataaatacaaaagctaACTTGGTGGAAAAAAGAAGCGCAAGTCTCCTGTGCTACCCATCTGCATTCATGTGCATTGTTTTGTCTTAATGCAGCAGCATCAAACAATTTTGCTGCATGAATGTACAAATATTTGTCATGCTAATCAAGTAtcataaaactgaaactaatGCACGTAACGTGCGTATTATTAGGGAGGAATAAACTTAAGACGTTCAGTTAAGACCGCCATATGcagaacaaaattaattaagtGTGCTTATACTTTTAATTCTCAtatgtgtaattttaaaataatgtatattaaaatgttacgttttaatagta
>XM_043220873.1
GGACAGAGATGGGATCCTGTAAAGCAGGTTTTGAATGACCTGTGCTTTTGTCTGTCACTGTGACATAAGTACTGTCGGTCTTTTGGAAAGCTGTCTAAATTCAGTTGTGTCTGGTGAGCTGAGCGTACTATTTAAGGAAAGGTGTAGCAAGTTTGTTTTTGAGGCAgttgtttacatgtttacaagaaaaaaagtttcGGAGTGGAATATTACGGTTTAGGATTATACGAATGAAAAACTTGCGGCTCCACCTCAAACcgaaaaacatcttttttccttttttgggaCTGGCACTacttatatgttgttttttcgCATGTTTGACTGTAAATGAAAGAGGAAGGCAGAAAACCAGAGTGTTTGAGAGGCCGCTTCTGACAGCGCGATATGAAATTAATTGCACGGCGATATATGAAATGGAGCCGGTGGAATTGGGCAAAACTTTAGCCATTCGCAAGGAAAAAAGCTATACAGGGCCAGTCGATGAGGCTGTTGTGAATTCCACCTCTAACTGTGATCAGTTTGTGTCACAAGGCTATGGTATGATGGAAGGCTCTGAGTTTGAGCGTCAATTTCCTCTTGCTTATTCTTTGGTCGTTCACCAGGACGCTGCTCTTGTGGAGAGGTTGCTCAGAGCCGTTTATATGCCTCATAACATATATTGCATACATTACGATCTGAAGTCCTCAGATGACTTTATTTCAGCGATGAAAGGTCTGGCCCGTTGCCTCCCCAACGTCTTCATTGCTTCAAAGCTGGAGAGGGTGCAGTACGCCGGCTTCTCGCGACTCAAAGCCGATCTTAATTGCCTGTCTGACCTCCTCCATTCTGAGGTCAAGTGGAAGTATGTCATAAACCTGTGCGGTCAGGACTTTCCACTGCGGACGAACGCTGAGCTGGTGTCGGATCTAAAAGAGCTGCAGGGCAGGAACATGGTGGAGAGCAAGTGGCCTGGAGGAAAGCAATGGCGCTGGACTTACCATCACTTAGTGAAAGATAATAATTCACAGTACTACGGCTCACCTGTCACCACTTCTGAGAAGAAATCTCCACCTCCTCACAACATAGCCATGTTTGTGGGCAGCGCGTACTTCACACTTTCAAGAGAATTTGTGGCTTTTGTTAACCAGAGTTCTGTAGCCAAGGATTTCTTGGCTTGGACTGAGGATACGTACTCACCTGATGAACACTTCTGGGCAACTCTGGTCCGTGTGTCTGGAGTACCAGGAGAAGTGCCGAGTTCTGACCCTGAGATCTCAGAACTAGCAAGTAAAACCCGTCTGGTGAAGTGGTGGTCTTTAGAAGAAAGACTTTACCCACCATGCACTGGAGTCCATGTGCGAGAAGTGTGCATTTATGGCGCCGCTGAGCTCAGGTGGCTCCTGAACTACGGACACTGGTTCGCTAATAAAGTGGATCCCAAAGTGGATCCCGTTCTTATGGAATGTTTAGAAGAGATACTTTCAGAAAAACGGAGAGAAACAATGCATTCTCATTTTGGAGATCACTAATACTGGACGCCTAGATGTGTGTTGTAAGTTATTCTGTGTCGCCCCCTGCTGTGTACAAAAAAATGGCGCACGAGTTGGttcattaatgtattattgCATTGTTCATTATATTACGTTTGCAGATACAAATAAttgctaaaagtaaaaaaaaaaaatactaataaatgaatgaagtgCTCATTGCAGATTAACCTCAAATTTTAaggttatttatttgtatgtttgagtaaattattatgagttgtttttttttatattgaaattgtCTAGCAAAATAACCACATTAATAAATGACTTATCGTGGCTTTAAgttcaataaatacaaaagctaACTTGGTGGAAAAAAGAAGCGCAAGTCTCCTGTGCTACCCATCTGCATTCATGTGCATTGTTTTGTCTTAATGCAGCAGCATCAAACAATTTTGCTGCATGAATGTACAAATATTTGTCATGCTAATCAAGTAtcataaaactgaaactaatGCACGTAACGTGCGTATTATTAGGGAGGAATAAACTTAAGACGTTCAGTTAAGACCGCCATATGcagaacaaaattaattaagtGTGCTTATACTTTTAATTCTCAtatgtgtaattttaaaataatgtatattaaaatgttacgttttaatagta

Function

NR:

description
PREDICTED: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0008375 acetylglucosaminyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220871.1 True 2398 mRNA 0.40 2 2842705 2845216
XM_043220872.1 False 2208 mRNA 0.41 3 2842705 2845216
XM_043220873.1 False 2150 mRNA 0.41 2 2842706 2845216

Neighbor

gene id symbol gene type direction distance location
gcnt4b.2 LOC107737880,LOC107595710,LOC107662521,LOC107733381,LOC107692321,LOC107736920,LOC107548763,LOC107692322 coding upstream 5456 2831751 ~ 2837249 (+)
ptpra ptpra,LOC107736890,LOC107737868 coding upstream 15796 2802146 ~ 2826909 (+)
idh3b idh3b,LOC107737870,LOC107736889,LOC107548787 coding upstream 42205 2793688 ~ 2800500 (+)
p2rx4a p2rx4,p2rx4a,LOC107737869 coding upstream 49160 2789507 ~ 2793545 (+)
gstt1b LOC107548781,LOC107661340,LOC107595683,LOC107737872 coding upstream 53612 2786644 ~ 2789093 (+)
fam169ab fam169ab,LOC107692296,LOC107548785,LOC107736892,LOC107737867,LOC107661277 coding downstream 564 2845780 ~ 2861350 (+)
trnaa-ugc_120 NA coding downstream 101636 2946852 ~ 2946923 (+)
LOC122326345 NA coding downstream 109563 2954779 ~ 2956580 (+)
LOC122326342 NA coding downstream 111970 2957186 ~ 2964676 (+)
LOC122326343 LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914 coding downstream 120950 2966166 ~ 2976051 (+)
G143465 NA non-coding upstream 41357 2800730 ~ 2801348 (+)
G143385 NA non-coding upstream 299398 2487403 ~ 2543307 (+)
G143349 NA non-coding upstream 352505 2426489 ~ 2490200 (+)
G143356 NA non-coding upstream 438615 2402747 ~ 2404090 (+)
G143354 LOC107595722,LOC107662860,LOC107739708,LOC107548798 non-coding upstream 442636 2399072 ~ 2400069 (+)
G143491 NA non-coding downstream 17556 2862772 ~ 2863017 (+)
G143509 NA non-coding downstream 85046 2930262 ~ 2937617 (+)
G143578 NA non-coding downstream 469961 3315177 ~ 3315473 (+)
LOC122326852 NA non-coding downstream 491045 3336261 ~ 3336689 (+)
G143590 NA non-coding downstream 643295 3488511 ~ 3492587 (+)
gnrh2 LOC107595723 other upstream 12349 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 605510 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 786026 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 1613650 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 1686563 1153104 ~ 1156142 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 452774 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 856213 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 1261585 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 1287220 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1666710 4511926 ~ 4524180 (+)

Expression


Co-expression Network