LOC122326163 (LOC107681122,LOC107589283,LOC107706442)


Basic Information

Item Value
gene id LOC122326163
gene name LOC107681122,LOC107589283,LOC107706442
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 4754626 ~ 4757400 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220879.1
TCCTCAGCGCTCTTATATTTGACGTTGTTGGATGTCTAAGGCAACACACTGAGAAAACAGACAGCATGATGGATGTCTGCGGATATTTGATCGCGTATTACTTCTTGGCGTTCACCTTTTTCAAAGTGGCAGCCTGTTCTGAGGTGTCCATTATTGGAGGGAAAGCTGTGAAAAAACTTCAACCATGGATGGTGTCCATTCAGAAGGACCAGAAGCATGTGTGTGGAGGAATCCTGATTAAAGACCAGTGGGTTTTAACCGCAGCATATTGTCAAGAAAAACCCGAGAAATCTGTGACAGTTCTCACAGGATCTCTGTCTCTGAGTAAAGGCACTCAGCGTGTTGGCATCCTCGGTTACAAGTACCCCAATACATACAATGCAAGAACTAAACAAGATGATATCATGCTTATTAAGCTaaacaaaaaagtgaaagcAAAACCCAAAAAACTCCCTTAAAAGGTAAAAGATGTTCCAACCGGAACAACTTGTGTTGTGACGGGATGGGGAACTACTGATTCTAACAGCCAGGAACCTTCTGATAAACTGCAAATGTTAGAGGTGTCAGTGATGCACAGAGACCGGTGCAACCTCTACTACAAGGGAAATCCTGTGATCACCAAAGACATGCTGTGCGCAGGAGGCAAGCAAGAAAAGACAGGCACCTGTTGGGGAGATTCCGGTGGACCTCTGGAATGTAAGAAAAGCATAGTTGGAGTGGTATCGGGGTCGAAAGAATGTGGTAATCCCAGGAAACCAACTGTGTACACCTTTCTCTCCGAAAGACACATCCGCTGGATCAACAGCATTCTGAAAAAGCAATTCAACAGCACATCCTTTTAAGAAGCTAAACATTTCCTGCATGTAGACTGTTGATTGGTTCAGATTGatgtaactaaaaaaaaaccaaaaaaaccttaTATTTACAACCAaatacttattatttttaaacaagtaaaattgAGCAATTTATTCAATTGATTCAATATTGTATTCATACAAATTCAGTTAAGAACACTTTTCcagtatgctttatttttgatggACACACTCATACTTTGGATAACCAAAGACTGGAAGATGACCTGCATTGACTGgggaacattttcaaaactatgttgatggaaaaaaaaagtggatgaGTGAATTGGTTATTTAATTAGTAATGCTTTCTTTGTTTGTCTTCCGTTACATTGAGCACATTATACATTAACACGAAATCACATCAGGTAAACTCCTACTGGCTTTTATAATATTCTTTGTATGCAAACACAATCAAACACTTCCTTGAAAAAATTaagtgtagaaaaaaaacaagcagagaCCTCCTGGTGAGAACATTAATCAAACCCCATACAGAGGACAGAACAGCAGACTGGGCTCAAAAGTGCATCTGAAAATATGTGCAACGGAGATGATCTATAGATGATTAGCTTAGTGTTGTAAATACAGGacaaactgtttgtttttggggATAAACATGATGGGAAAATGGGATTCAATGAGTAATAGGCCtatataatacatgtataataacattttatgtaacattactgtaaaatgtacaattaaaggTACATTCCATGTCATtctgaaattaataaacataaatttgCATTCCA

Function

NR:

description
PREDICTED: granzyme K-like

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K08663 GZMK; granzyme K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220879.1 True 1621 mRNA 0.38 5 4754626 4757400

Neighbor

gene id symbol gene type direction distance location
amacr amacr coding upstream 25266 4720756 ~ 4729360 (+)
hpse hpse coding upstream 49850 4698726 ~ 4704776 (+)
helq helq,LOC107681193,LOC107591711 coding upstream 56044 4692192 ~ 4698582 (+)
abraxas1 fam175a,LOC107681177,LOC107589234,LOC107703595,LOC107591751,LOC107722832 coding upstream 64287 4686916 ~ 4690339 (+)
nkx6.1 nkx6-1,nkx6.1,LOC107706438,LOC107700773,LOC107722812,LOC107703597,LOC107591753 coding upstream 166168 4585890 ~ 4588458 (+)
rai14 rai14,LOC107681156,LOC107706485,LOC107589239,LOC107750373,LOC107703593,LOC107591710 coding downstream 3765 4761165 ~ 4793419 (+)
fgf10a fgf10a,LOC107706443,LOC107589284,LOC107750480,LOC107703510,LOC107591746,LOC107681114 coding downstream 54098 4811498 ~ 4826764 (+)
ccdc80l2 ccdc80l2,LOC107706489,LOC107589242,LOC107681168,LOC107750362 coding downstream 136627 4894027 ~ 4898585 (+)
si:dkey-247m21.3 LOC107706496,LOC107681108,LOC107589286,LOC107591744,LOC107703507,LOC107708508 coding downstream 319156 5076556 ~ 5097197 (+)
pde6b pde6b,LOC107706500,LOC107681163,LOC107708533,LOC108436964,LOC107703582 coding downstream 361694 5119094 ~ 5128226 (+)
G143827 NA non-coding upstream 2367 4751907 ~ 4752259 (+)
G143826 NA non-coding upstream 3116 4751217 ~ 4751510 (+)
G143751 NA non-coding upstream 165474 4588726 ~ 4589152 (+)
LOC122326582 NA non-coding upstream 176498 4563334 ~ 4578128 (+)
G143745 NA non-coding upstream 202158 4551421 ~ 4552468 (+)
G143872 NA non-coding downstream 42702 4800102 ~ 4862403 (+)
G143887 NA non-coding downstream 133738 4891138 ~ 4893087 (+)
LOC122326855 NA non-coding downstream 277530 5034930 ~ 5067800 (+)
LOC122326250 NA non-coding downstream 312927 5070327 ~ 5075603 (+)
G143926 slc26a1,LOC107589247,LOC107706495,LOC107681097 non-coding downstream 346457 5103857 ~ 5106226 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other upstream 9360 4730603 ~ 4745266 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other upstream 45185 4705157 ~ 4709441 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other upstream 230446 4511926 ~ 4524180 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other upstream 368414 4132436 ~ 4386212 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other upstream 540854 4106801 ~ 4213772 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other downstream 142090 4899490 ~ 4911816 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other downstream 190184 4947584 ~ 5028046 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other downstream 743703 5501103 ~ 5506433 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other downstream 744633 5502033 ~ 5517936 (+)
sdhaf1 sdhaf1 other downstream 749146 5506546 ~ 5508393 (+)

Expression


Co-expression Network