or61a1 (LOC107703446)


Basic Information

Item Value
gene id or61a1
gene name LOC107703446
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5697407 ~ 5698345 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220954.1
ATGGACAACATCTCttccttttcctctttctctctcacggCTCTGAATGACACCAGCTGGTCCAGCAGGGTCACTGTATTTTCATTTGCCCTGCCTGGCTTTTTTCTGACCATTTTTGTCAACACAGTCTTGattttcataattgttttaGAGAAAGTTCTCCACCAGcctatgtatatttttgtgtgcaatttGTGTATAAATGGATTATACGGGGCCACGGGACTGTATCCACCCctgctgtattatttattaaatgaaaccGATGTTATCACTATGGAAGGATGTGCCATCCAAAGCTTTGCCATTTTCACCTATGCAATAGGTGAGTTCACTAATTTGTGCGTTATGGCGTTCGATAGATACTTAGCAATCTGCAGACCTCTGTACTACCATACTGTCATGACGACCATCATGGTTTGGAGGCTGCTGACTTTCATTTGGATGTTTCCCTGCTGCACTGCAATACTGATGATACTGATGACGCTCAGGTTTCCCATGTGCATGAACCAGATAAACAAACTGTACTGTGAAAACTGGGTCTTGGAGAGACTTGCCTGCAGGGTGGACACTGTTCAGTTTGTAGTCAATGGAATATTAACGTGCGTTGTTAATGCTCTGGTatggtttgtgtttttgtcttataTAAACATCCTAATCGCTTGTAAGCGCTCTGTTCAAAACCACAAGAAGTTCATGACGACATGTCTGCCACATTTGGTAGCCTTTTTGAATTATACGGTCTTGTCACTTTTTAATAGCTTACATGAGCGGTTTGCAACTAGCAGTCTGCCTCAGGGTTTTAAAAACTTGTTGTCGGTTTCCTTTGTGATCATTCCTCCTCTGGTTAATCCTATAATATATGGAATTGTACTAACTCCTATAAGGactaaagcaaaaaatgtattccGAGGGTTAAGATCTAAACATACTGATTAA

Function

NR:

description
PREDICTED: olfactory receptor 15-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220954.1 True 939 mRNA 0.41 1 5697407 5698345

Neighbor

gene id symbol gene type direction distance location
LOC122326976 LOC107719001,LOC107703447,LOC107719002,LOC107573645,LOC107703448 coding upstream 1496 5694961 ~ 5695911 (+)
LOC122326975 or125-1,LOC107719002,LOC107573645,LOC107703448,LOC107719001,LOC107703447 coding upstream 10268 5686198 ~ 5687139 (+)
LOC122326974 or125-1,LOC107719002,LOC107573645,LOC107719001,LOC107703448,LOC107703447,LOC107573646 coding upstream 11339 5679070 ~ 5686068 (+)
LOC122326973 or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448 coding upstream 23297 5672344 ~ 5674110 (+)
LOC122326972 LOC107706424,LOC107681105,LOC107603271 coding upstream 27039 5669415 ~ 5670368 (+)
LOC122326977 LOC107703495,LOC107718999,LOC107703444 coding downstream 3127 5701472 ~ 5702410 (+)
pold3 pold3,LOC107706527,LOC107548157,LOC107719019,LOC107573853 coding downstream 8777 5707122 ~ 5712844 (+)
LOC122326891 rpl17,LOC107722835,LOC107700774,LOC107703598 coding downstream 224646 5922991 ~ 5925662 (+)
LOC122327012 NA coding downstream 225075 5923420 ~ 5923495 (+)
LOC122327009 NA coding downstream 225944 5924289 ~ 5924361 (+)
G144129 NA non-coding upstream 12310 5684828 ~ 5685097 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding upstream 64556 5632041 ~ 5632851 (+)
G144081 LOC107708509 non-coding upstream 157943 5538200 ~ 5539464 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 322485 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 369002 5327230 ~ 5328405 (+)
G144130 NA non-coding downstream 7195 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 94519 5792864 ~ 5794604 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding downstream 231424 5929769 ~ 5930885 (+)
G144212 NA non-coding downstream 364079 6062424 ~ 6062680 (+)
G144308 LOC107706534,LOC107548126,LOC107681195,LOC107703486,LOC107719012,LOC107551634 non-coding downstream 764305 6462650 ~ 6462933 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other upstream 179471 5502033 ~ 5517936 (+)
G144077 NA other upstream 186661 5508665 ~ 5510746 (+)
sdhaf1 sdhaf1 other upstream 189014 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 190974 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 669361 4947584 ~ 5028046 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 34095 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 37568 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 96417 5794762 ~ 5799702 (+)
G144152 NA other downstream 149596 5847941 ~ 5849053 (+)
G144330 NA other downstream 835755 6534100 ~ 6535794 (+)

Expression


Co-expression Network