LOC122326343 (LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914)


Basic Information

Item Value
gene id LOC122326343
gene name LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 2966166 ~ 2976051 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221157.1
TTAGACGATCAGTATGAACCTGACCGCCCATCTTCTGGACCTCATGCTGAAGGCTTCCAACCTCTCTCGCTGGCAGTTCATCCAGGAATTCTCCATTCCTCCTCTGGTGGCTGTGCCCAGACTCCCTAGCTCCCTGCTTCCAGTTTTTGGTGTGCTCTATGTGCTCATCTTTGGGCTCGCGGTGGTGGGAAACGGGGCAGTGCTGGTTCTCTTATGTCGCAGGAAGGCTCTGCAGTCTCCAAGCACCTTCTTCATTTGCTCTCTGGCACTTAGCGACCTCCTGATATCCATAGTTTGTGTTCCTGCCACACTGCTGCAGCACTTCTTCACCAACTGGTTGGCAGGTGATTTCCTGTGCAAGTTAATACCGTTCTTACAAGTGACAGGCATCGCAACCAGCATGCTCACCATGACTTGTATTGCTGTAGAGCGTTTCAAGGGAATCCTTTATCCTCTTCATGTCCGCAACAGCTACTTTCTTTGTCATGCCTTCAAGATGCTGGTGGCTGTATGGTTGGTTGCCCTGGCAATCGCTGCTCCCATGTGGTTTGTTCAAAAGGTGGAGgtgaaatatgactttctgtttgACATCCACCACACCTGTTGTTTGGAAGTATGGCCGAGCCAGCAGCGGAGGAGAGCGTACACTAGCTGTCTGTCCTTCATGGTGTTTCTGGCCCCCTTGACGACCATGGCCATCCTGTACTGGAAGATTATGCGGGAGCTCTGGGGCAAGCACAAAGTTCACAACGTCATGTTTCAAACACTCCCGGGATCTGAAATCAACAAGATTACCAGGAGGAAGAAACGTGCAGTGAGAATGATGGCCACCGTCGTGCTGCTCTTTGCCGCCTGCTGGGCGCCTTTCCATCTGGTCTCCCTCCTGCTTGACTACGGTCAGCTGGACCTTGATCTTGACTCCGAGTTTCTCCTAGTCAGCGTGGTTCAGATCCTGGGATTCAGCAACTCTGTGTGTAACCCGCTGGTTTATGCTGCCCTTAACACCACCTTTAAAAGAGACCTGCTGGCTCTGCTCACTCGAGGATGCTCTGGTACAGTAGGTTGCTGCTGTAGATCGTGCTCCTGCTGGTCCTGGAGGAGTCACAAACAAGTGGGCATCTCAGTGGTGGACTCAGTGGAACCAAGACGGGGCCTGGACACAACATGCAAACAGGGAAGGATCAGGTTGTGGAGCAAACCAGCATGGGAGGCTGAACCAGAAAGGCCTACATCTAACATGTTCCCCCCCATGAACCTTCTCAGCGCCATCAGACCCAAAAAAACCTCCAGTACCATGATGCTAAGTGTTATCGACCCtccacacacagacagcacCTCTGGGTCTGACCGGCTTCCCGCAGGCATACTGGGACAGTGAATGTCAACAGAATGAAATTGGAGCGATTGCTTAAACTCATTGACTTAACGATTTAGAAGACCCGAATCCTTCAGGAGCTTAGAACAATCTCAAATATAGCCACGTTTTTACCTTTCGCTAATGACGTGGATTCAACAAACTGCAGGCAGCGGTTTTCAGAGCTTTGAAGGATGTTTCTTGAGCTCAGCTGATATCTCCACGATAAGGATCACCACTGAAAGAAACTGAGACGGTTTCAGTTTTGTTGTGGTTTCATGCTTCTGAAAACCGCATATGAGCAAGACCCGTTACAGTACATCGTTAGTTTTAGTTCAGCTCTGAGAAAGACCAAAGACCATGTGTGCACTCTTCCAAAACTgtgGAGCGCGTGCAGCCTCTTGCCTCAGGGAATATGGACTCTGTCTCCATGAATGGGCCCAAAGTCAGAAGAAGCCTGCAGAGAGGTTTGGAGATGCCCAGCTGAGTACGAACGACACGCTCTCCATAAAGCCTGACAACTCGGGTTTAAATAATGACAACTGTAGAGTTTGCTGCAGGCAAGATTTCACTATTCAGACAACCTGGAGATAGAGATTATGTAGATTGGTAACAACACGCATTTGGCACCTTGATACCTTACCATATCGTACTACCAGCATCGttacaataatcatattttGAGAAACcatctgtatatttttatattgaaatgcACATAAACATAACTCTTAAGTAGCCTTGATGGTTTCACCATAGTATATATTTGTtgacttaatataaaaaaaaaaaaggtttcatatTAAAAGTCTTAATATATCACTGCA

Function

NR:

description
PREDICTED: pyroglutamylated RFamide peptide receptor-like

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221157.1 True 2181 mRNA 0.48 7 2966166 2976051

Neighbor

gene id symbol gene type direction distance location
LOC122326342 NA coding upstream 1490 2957186 ~ 2964676 (+)
LOC122326345 NA coding upstream 9586 2954779 ~ 2956580 (+)
trnaa-ugc_120 NA coding upstream 19243 2946852 ~ 2946923 (+)
fam169ab fam169ab,LOC107692296,LOC107548785,LOC107736892,LOC107737867,LOC107661277 coding upstream 104816 2845780 ~ 2861350 (+)
LOC122326157 LOC107736921,LOC107595711,LOC107548780,LOC107737879,LOC107692322,LOC107733381,LOC107548763,LOC107595710 coding upstream 120950 2842705 ~ 2845216 (+)
LOC122326816 NA coding downstream 315646 3291697 ~ 3294008 (+)
LOC122326784 ube2g1b,ub2g1,LOC107686891,LOC107595690,LOC106579958,LOC103152401,LOC106931442 coding downstream 350449 3326500 ~ 3329805 (+)
LOC122326952 NA coding downstream 360934 3336985 ~ 3338965 (+)
LOC122326141 aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728 coding downstream 499932 3475983 ~ 3480494 (+)
LOC122326336 vps29,LOC107595689 coding downstream 517933 3493984 ~ 3497228 (+)
G143509 NA non-coding upstream 28549 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 103149 2862772 ~ 2863017 (+)
G143465 NA non-coding upstream 164818 2800730 ~ 2801348 (+)
G143385 NA non-coding upstream 422859 2487403 ~ 2543307 (+)
G143349 NA non-coding upstream 475966 2426489 ~ 2490200 (+)
G143578 NA non-coding downstream 339126 3315177 ~ 3315473 (+)
LOC122326852 NA non-coding downstream 360210 3336261 ~ 3336689 (+)
G143590 NA non-coding downstream 512460 3488511 ~ 3492587 (+)
G143638 NA non-coding downstream 632868 3608919 ~ 3610050 (+)
G143656 NA non-coding downstream 775548 3751599 ~ 3752198 (+)
gnrh2 LOC107595723 other upstream 135810 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 728971 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 909487 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 1737111 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 1810024 1153104 ~ 1156142 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 321939 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 725378 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 1130750 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 1156385 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1535875 4511926 ~ 4524180 (+)

Expression


Co-expression Network