nudt2 (nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228)


Basic Information

Item Value
gene id nudt2
gene name nudt2,LOC107739745,LOC107661859,LOC107600925,LOC107579639,LOC107584670,LOC107754633,LOC107665228
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1180455 ~ 1184070 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221455.1
TCTTCAACGTCATCGATGCGCAGCAGTTACGCATATGCGCCGTCAAAACAGAAAGTAGCCTGAATACTATGCTCTTTTCCGTGTGCCGTTCATTTATTGATATGTCGCATCTATTCTAAGCAAAAAGGAACATTGAATCATTACGGGCTGGACATTATGGCACTGCGGGCATGTGGATTTGTTATTTTTCGCCGTTTGGTCCAGAAGCCTCCCCCTGATAATATAGAGTTCCTGCTGCTGCAGACATCCTATGGGGAAAACCACTGGACACCACCCAAAGGTCACGTTGACCCTGGAGAGGACGACTTCACCACTGCCTTGAGAGAGACACAGGAGGAAGCGGGTTTAGGTAAAGATCACCTGCATATGGTCGATGGCTTCCTGCAGAGGTTACACTATCAGGTCCGAGGAAAGGACAAAGAGGTCCTCTATTGGTTGGCTGAGCTGCGTGACCCAAACACACAGGTCGTTCTCTCAGATGAACACCAGGATTACCGCTGGGCCAAACTAGAGGACGCCTGCAAGCTGGCGAAATACCAGGACTTACAGGACACACTTACAGCGGCGCAGCGCTATCTAGAAACACAGGGCAAACAGTAACATTCACACTTGGTTTTGACATTTAGACAACGACAGAGGTGAATGCTTGCTCTCATCTTTCTAAAATTGTTTTAGGCTGTCGAATTAATGATGGTTTAAAAGGAGGACCCGATGTGCTGTATGAAATTTGACGTAGACATTGACTTCTGTACTTTTGCGTCTCTAATTGTTAAgctgaatttaatttgaattctTAATAGGTCGCTTCCAAgtagttaaaaatgttaagacAAACGCACAACCTCAAAATCGCCACCAACAAAGCGAAACAAAGCTGCCATTCATCACAAAGAATTTTCCGGGTTCATTACGAGGTAAGCTGTAATGACGCCATCTGTGGCATACTGTTAATGACcacagaaaatcattttgaaaagtCTTACAAATAGACAGACATAAAAACCGAGACTACAGGGCTTGTAGGTGGATTATGACACCATTGACATAtacaaactaattttttttctatgcacACACGTTATCCAATCTCATTGTCACTTTTTCTTTCACATACTGTAAAGTTCTTTCTGTAAAGTTCATTGTATGCAAGTTTGCATGCTGTACCATTCAGATTGTCCTAAATTATTAACTATGATAAAACCAGTAAATGAAAAAGTTTAAGAATGAAtgattgttttagtattatttatattgcattagtttttattaatatttacaagcttttatttttttcattaatttaatccattttaattaattttatccattttaatcaattaactTCAGTTTAAAAACTTACTAAACGTTTATGATTTGCTATAAATTtgttaataatgtttacattttattttagctttatttcaataaaaaagttttttagtagttttagtcAATGTTAACAACACCGTCATTAACTGAAAGCACCTCTAAATGTCTTGTCTAATGGTTTAATTGCTAAGGAGCATTAACTCctgtacatacacacaaacaaaaatgaattgtaTTGTGATCATACAAGCACAGTCTTAAAATGATCATACTGGTACACCCCCCCCCCACCCCCAAACTCAAATACTTATGTTTAGAATAGAAATAGGTATCGATTTAGAGCCATTCTCACTGTTCTCCATTCTTCCTTGTGTGAATATTAAGAATGATATTCCCTTTAACAACATTACAAGAGAAAGGAAATGCTTCAAACTTATAGCAAATAATGACTTCGGTTGTTTTGATCTGACTCAGGACCACAAATCCTGTCAAAGAATAgcatatgaaacaaaaacaaaccaaaaaaattgttaatgaaacattaaaaacacactcatgacacacaaataataaaatcctTCAAGACAAATCCACTGTCGATTAACGTCACAACACTTTTTGAAATGAACTTGGTTGTTTTGCTGTGCACAGGGGTGCAATACACCGAGAGTCTCTTGCTGAATGTGTAAAATCCAGTCCGTTTAATCGATTTAAATCGTCCCAGTTGAGCCCTTTCGGCCCATAGTCCAAAGGTTTAAGGGAGCGATTGAGCCGGGAACGATAGTTCTAGATAGTTCAGTGAGTTCATGATGCTCAGGAGAGTACGAGAGCACCGTTTCCTCACGATCCTCACATCCACACTCCCTTCTGGAGGGGTTTAGTAGGACCAGGAATCAGCATCCGTGTCCTTGGCTGGTTTGTGGGAATAAAGGTGTACCTGAGACCCCATGTGCATAAACATCTACGCTTCCACCCCCCCTCAGTGAGACCTTAGGGATTCACGTGCCTCATCGGATGATTGACACAtcatataaaacacaattaaacacacaaGCATGCTCTTGAAAGCCACGGCCCACGACGGCACCGTTGCCAACGCAAAAAAGCATAAGACCGGGGATGAGAGGGCTCACACCGATGAGCGAAATGTCCTCAGCAGTCACTGATCTCAAACCccgtact

Function

symbol description
nudt2 Predicted to enable bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity. Predicted to be involved in AMP biosynthetic process and ATP biosynthetic process. Orthologous to human NUDT2 (nudix hydrolase 2).

NR:

description
bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] isoform X4

GO:

id name namespace
GO:0008796 bis(5'-nucleosyl)-tetraphosphatase activity molecular_function

KEGG:

id description
K01518 NUDT2; bis(5'-nucleosidyl)-tetraphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221455.1 True 2511 mRNA 0.40 3 1180455 1184070

Neighbor

gene id symbol gene type direction distance location
ell2 ell2,LOC107739680,LOC107665220,LOC107600927,LOC107754629 coding upstream 27951 1139245 ~ 1152504 (+)
pcsk1 LOC107739678,LOC107661910,LOC107600928,LOC107665244 coding upstream 48830 1116591 ~ 1131625 (+)
cd8a NA coding upstream 103319 1074249 ~ 1077136 (+)
cd8b LOC107754642,LOC107665224,LOC107600931,LOC107739674,LOC107662663 coding upstream 112092 1064842 ~ 1068363 (+)
zmat1 krcc1,LOC107600930,LOC107662001,LOC107739673,LOC107584622 coding upstream 117315 1056331 ~ 1063140 (+)
ubap1 ubap1,LOC107661828,LOC107739682,LOC107754631,LOC107665242 coding downstream 8329 1192399 ~ 1199773 (+)
dcaf12 dcaf12,LOC107661821,LOC107739683,LOC107600922,LOC107754635,LOC107584538,LOC107665237 coding downstream 19324 1203394 ~ 1212789 (+)
ubap2a ubap2a,ubap2,LOC107665236,LOC107661806 coding downstream 29830 1213900 ~ 1227997 (+)
mlnl mlnl coding downstream 54385 1238455 ~ 1241794 (+)
aqp7 aqp7,LOC107661734,LOC107600917,LOC107739721 coding downstream 64044 1248114 ~ 1255051 (+)
G142965 rfesd,LOC107661841,LOC107600903,LOC107735162 non-coding upstream 1816 1108322 ~ 1178639 (+)
G142964 NA non-coding upstream 73503 1106746 ~ 1106952 (+)
G142963 NA non-coding upstream 74638 1105485 ~ 1105817 (+)
G142954 NA non-coding upstream 78348 1090243 ~ 1102107 (+)
G142933 NA non-coding upstream 97182 1082167 ~ 1083273 (+)
G142952 NA non-coding downstream 16666 1200736 ~ 1201244 (+)
G142950 NA non-coding downstream 17306 1201376 ~ 1202423 (+)
G142977 LOC107662880 non-coding downstream 31520 1215590 ~ 1246809 (+)
G142943 NA non-coding downstream 45478 1229548 ~ 1236155 (+)
G143139 wdr34,LOC107736865,LOC107584613 non-coding downstream 578312 1762382 ~ 1762837 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 24313 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 124530 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 374349 735722 ~ 806106 (+)
LOC122326311 NA other downstream 43928 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 846034 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1049589 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 1645044 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 2113920 3297990 ~ 3320013 (+)

Expression


Co-expression Network