LOC122326553 (si:dkey-1d7.3,LOC107565380,LOC107566205,LOC107722807)


Basic Information

Item Value
gene id LOC122326553
gene name si:dkey-1d7.3,LOC107565380,LOC107566205,LOC107722807
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 4338972 ~ 4359303 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221519.1
ATGTTGCTGATGGTTATAGCCTTGTGCCTATCCTGTGCTAAAGGAATGAAGGTTGTGGAGTTGTCTGATGACCCAAGATCCCTGTCCCCTCTCGCTGCTCCTCCAAGTGTGAACTATCAAATCATCAATGCAGacttcctcctcctcagagACACCAGTCAGGACGTAATGGACAACTCCAGCCTGCGGGCACAAAGGCAACCTTTCATCCTCACTGGACTCACTGGCCAGCCAGCCATCAATGTCAGCTATGGTCCCATGTCTTTGGAGCAGTCTATACCACTGCATATGATCCACACCGGCCCCAGGATCCCGTTTATATTGGCCCGTCAAGTACGTTCTTCTACGCCAGCCTTGTATGTGTTGTTTTACGCAACCGGTAATAGAGACGATATGAGCGAGGGCCCGATGCAAAACATGCCAGGACAGAATGAAGGAGGGTACATTTGTCTTACAGCATATGCCTTCTGGGAATCCAGAGAGGTCAAGGACAGTTGCTCCATCTCTGCGGATGGTGGATTCTGCTTGGTGCACCTGAAACCTGAGCCAGCCTGGTTCAACCGAGGTGGCAGGTCAAGCTGGGAGCAGAGAGGCGATCAAAGAGGAAATGTTGCTGAACTTTACTACCAGATCAGACCCAGTCCCAGCGGTCAGTGTGTCCCGCAAGAGAGCAAGATAAGAAGGGGTCCACAGCATAGTGACCTGGGACGACAGATCTATGGAACCTCCATGAAGAAGATTGGGACCGTAAATCTCCTGCGATCGCCTCCTGGAAACCCCACGTTTATGCGTTTACGCCTCGGAGGAGCCGTCATCATCCAGACGTCCTCGAAACCACTAAAGACCACAGACACTGCAACTTTCTATGTGTTCCTATCAAGCACATCACCAGTTGAACATTTCATACTCAGAGCCACATCAAGAAAAGGCATGTCATTCAGCACAGCCAGACCCAGTGATGCAAGCCTGTGGGACATCACTCTGGAACCTGGGAGAGGAAGTGACGCCCAAACCATCTCTGTGACCTGCCAGAAGAAAAGCACGTTCACTAGCAAAAGAGGTCTGCTGGAGGTCTTGCAGCTGGACTTTGAAACGGAGGAGCAGAGTGATCAGTTAGAGAGCCAGATGATCACGTGGCGACTAGAGCTGCCTGGAAACATGATCCGGGATGAAGGAACCATGAGGATTTACACCATTCAGAGAGACTATGTGGGAATAGCACCACTGATCAcggatacgGAGCTCCTCAACACGGCTGTGCTGACTGGTAAGAGGGTTTCTGTGCCTGTGAAAGTTTTGGGAGTTGAGGCTGATGGCTCCATCACAGACATCACTAACTCGTCTCGCTGCAGGTCTTCAGACCAGGATGTCCTGAAGGTGTCTGAGAGGTGTGATTCTGTGTATGTTAACGGCAAGGAGACGCGTGGAAGGGTGAGGATGATGGTGAACTTCACCTACAGCTACCTGAGCACACAGCTGGAGGTGAGCGTGTGGATGCCTCGAGTCCCCTTGTATATGGAGATATCTGATTCAGAGCTCAGTCAGATCAAAGCCTGGAGAGTTCCTGTCACAGGAAACAAAAAAGTGAGCTGGGAcacagaggaagaggatgagagGAAGGGCCGAGGCTGCATGCTGCAGTATCAGCACAGTTTGATTCGAGTGCTTACGGTCTTCACGGCAGAATCGCCAGATCCAAGCAGCCCGTCTCCTGCATACTTCCTTGGCTCTGATTGGCAGGTAGATGTGACACGGCTGGTTCGCTACTTTCTGAGAGTCGGGGATACAAGCGTTGCTCGCCTGCAGGCAGGAACCGTGCTGACAGGCAAGGCTGTGGGAGTCACCACCGTGCAGGTGATGTCTCCGTTGTCAAACTCGGTTCTGGCTGAGAGGATGATCCGAGTTCTGGATGATAAAGTCAGTATTACAGAGCTGGGTGTGCAGCTGGTCTCTGGCCTTTCCCTGAACCTGCAGCTCAGCCCAGGAAGCAACAGGGCCATCATTGCCAAGACAACCACACAGGAGATCATACACTACCCCAAGCAGGAGGCGGTGGTTGGCTGCTGGCTGAAGTTCAGCGATGGCTCCCAGACTCCTCTTGATGTGTACGATCCCAGTGGTTATTCCGTCACCATTTCTTCACTGGACCCAAAGGTAGCAACTGTGCGAAAGATCCCGGGGTCCGTCTTTGTTGTGGTCGCTGAAGCCGAGGGACAGGGCTTACTACTCAGAGCGGAGCTAGCTATCTGCGAGGCTTGTCAAAAATCCAAACGCAAGAGCAAACTGGCTGTGGGTGGAGGCATGGTAAAGGTAAAATTCCCGCCGGATGAACAGTTTGCAGGGACTGGCAAAAAAGAAAGTGATGGTGAGGGTAGAGACGATGTGTCTAAACTGATTCTTACATCCCCTCTAAACACACTTCAACACACTGTTATCCAAGAGAGCACcacaaaagcattcaaaactgcAACCAATTCCAACCTTCAAGAAGCAATAGGAGGTGGCGTATCTACAATTAATTCCCTAAACACTATGGATAAAACTCTCATTACCAAGCCCATTGCAGACATAGCGCTTGTTACTGTAGGCCCTAGGAGTCCAATAAAGAACGGATATGGAAACCTGCTTGAGAAGTCTAACTTCCCTTTTCCACCACAAGAACCCAAGAGAGAACCACCATTAGTGGAGAGTGACTTAATACAGATGTTTAGTGTGTTCACAGACATAGAGGTCTGCATCTATGCATTGGTAGGACTCTCTTGCTTGGTCATTATCGCCATCTTACTTCACTGTGCCACCAACAGCGCAAGATCACGCAGCAAGAAGTCTCCGGTTCAGTGCCAGGGTCAATCTGAGCACAAGCATCACTGGGTACGTCTAGGCACAGCTGCAGAGCAAAACAGAGCTGCGCCGATTGCGACTACCTCCAAGCAGGAGATGCAGGCAGCTGTGCAAAGACCGGTTCAGATGCAAAACAGCAGAGGCCCGGAGACAATCCAGCCGAGGGAGATCCCAGCCATTGCAGGTGAGGAGAGAACTGCCACTCTGGGACGAAGAACCAACACGCTTCCTCCGAGGCGGGATCCCATGGCTCCACTGCCTCCAATGGCAGTCAGATCTGCCACCCTCCTGGCAAGGCCCGTTCGCAGCGATCCTCTACATTCTCCCACAAGCAAAAGGAATCAGGTGCAATTTACAACCTTTACTACTCTGGACATCAAACACCTGGCTGCTCTCAAGAAGAGTGGCCAGAACTTCAGCTGGGCCAGTCAACCAGTTGGAGGTTGTCAAGCTGCCAGTATCAGCCAGGGTGGGTTAAATGGTAAAGCTGAAAGAGTCAatcatgtacatttttgtaaccCTGTGGAAGTATTTGCTCCGACACCGGAATCCAAAGAATCCAAAGGATTTCTTCCAGAAGGTCCATGGCCTATGGCTACACCGGTGTCAAAAGTGTGATGGTTTCTGTTTAAATTGGCCACagatctatttttatataaattgttgCATTGAACTGAATTTGACAGTTTATATAGGAATGTTTTTATGGacaatttaacacaaaaatttctttgtttttcatttatgtgtAT

Function

symbol description
si:dkey-1d7.3 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM132B (transmembrane protein 132B).

NR:

description
PREDICTED: transmembrane protein 132D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221519.1 True 3593 mRNA 0.50 11 4338972 4359303

Neighbor

gene id symbol gene type direction distance location
LOC122326555 LOC107565381,LOC107708362 coding upstream 7618 4287203 ~ 4331354 (+)
LOC122326554 LOC107708345,LOC107565383,LOC107661188,LOC107566207,LOC107722811,LOC107684913 coding upstream 52547 4283196 ~ 4286425 (+)
rimbp2a si:ch73-287m6.1,LOC107565381,LOC107708362 coding upstream 110480 4207661 ~ 4228492 (+)
LOC122326660 NA coding upstream 132291 4106787 ~ 4206681 (+)
stx2a LOC107708345,LOC107565383,LOC107661188,LOC107566207,LOC107722811,LOC107684913 coding upstream 232820 4102906 ~ 4106152 (+)
smpd4 smpd4,LOC107706469,LOC107700779,LOC107685262,LOC107722816 coding downstream 151067 4510370 ~ 4520829 (+)
crkl crkl,LOC107706473,LOC107589229,LOC107700778,LOC107591716,LOC107722822,LOC107703602 coding downstream 178959 4538262 ~ 4544632 (+)
nefla LOC107700775,LOC107706475,LOC107589231,LOC107703600,LOC107591713,LOC107722831 coding downstream 195055 4554358 ~ 4557626 (+)
rpl17 rpl17,LOC107722835,LOC107700774,LOC107703598 coding downstream 221331 4580634 ~ 4583302 (+)
LOC122327010 NA coding downstream 221748 4581051 ~ 4581126 (+)
G143717 NA non-coding upstream 252446 4075527 ~ 4086526 (+)
LOC122326258 NA non-coding upstream 417253 3919733 ~ 3921719 (+)
G143664 NA non-coding upstream 535203 3803458 ~ 3803769 (+)
LOC122326834 NA non-coding upstream 569416 3763332 ~ 3769556 (+)
G143656 NA non-coding upstream 586774 3751599 ~ 3752198 (+)
G143745 NA non-coding downstream 192118 4551421 ~ 4552468 (+)
LOC122326582 NA non-coding downstream 204031 4563334 ~ 4578128 (+)
G143751 NA non-coding downstream 229423 4588726 ~ 4589152 (+)
G143826 NA non-coding downstream 391914 4751217 ~ 4751510 (+)
G143827 NA non-coding downstream 392604 4751907 ~ 4752259 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other upstream 125200 4106801 ~ 4213772 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other upstream 634575 3701429 ~ 3704397 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 1018959 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 1508616 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 2101777 2233659 ~ 2237195 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 152623 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 345854 4705157 ~ 4709441 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other downstream 371300 4730603 ~ 4745266 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other downstream 540187 4899490 ~ 4911816 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other downstream 588281 4947584 ~ 5028046 (+)

Expression


Co-expression Network