LOC122326555 (LOC107565381,LOC107708362)


Basic Information

Item Value
gene id LOC122326555
gene name LOC107565381,LOC107708362
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 4287203 ~ 4331354 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221521.1
agttttgctctctttctcacatTCGCAGCTTGTTATACCTTGGAGAAAATGTCATGGTCTTACTTGCACTCAATCTTTCTGTTAACTTGCCAGAATGTAACAGATGTAACAGAACATACAGTTTTCCTTAACATTAAGTTGGGCTGCTGTCAACAGGGCCGCAGTACGAGACGAAAAGAAGACAAGAAGACATCAAATAAAAAGGAGATGCGAGGTCAAAGAATTGACGTAGAGCAGCTTCTCAGGCAGTCACAGACTGAACTGCTGTGGATCCAGCGACAGCTGTCAATCATAGCAGCAGGAGATGCCAATCGTGCACGGGCCCAAAAGAAGCTGAAGCAGGAGGCCCAGCCGTTGCACCTGGCCTCTCACGCAGCCCACCATGTGAACCGCTGCCACCTCTTAGAGGAAAAGAACAGAGCTCTTAAACTTGAGCTAGCCACTCTCAGACAGCATAAACAGCAGCACAGATCTCTGGAGTCAGAGGTCAACGAGCGGAGGAAGAGGTGTCAGATCCTTGAGAGAGAAGTGAAGAATAAGGCATTAGAATGTAAGACTTTGAAGAATGAGCTTCAGGATGCTTTGCTGGAGAGAAAACGGCTCAATCGTGAGCTGCTTAGTCACATCCTGAAGGCCACACAGTACGAGAAGGTAAAGTCAGACTATGATCAGCTCAGAAAGGCTTTTGGTTGTGTGAGTCAAGAGAGAGACTCTGCCAGGCAGGAGAAGGCTCAGCTCCAAGACAAACTGGAGAACCTTGAGCAGGTCCTGAAGCATATGCGAGAGGCTGCAGATCGGCGGCAGCAACTGGAGGCAGAGCATGAGCAGGCCTTGGCTTTCCTCAACTCCAGACAGCAGGAGATCAACCTTCTGCAGAAGGTTCAGGCTGAAGCTGAAAAAGAGCACGAAGAAGTGGTGCATTTGCTAGAGAGCCATATGGACAAAATGCAGGTCAAGGTTCATGACTTAGAGCAGAAATGCCGGACACAGAGTGAGCAGTGCAATATTTTGTCGAAAGAGCTGGAGAAATATCACCTGGGGTCAGACGTGGAGGATACACTCAACACTGACTCACAGGAGAAAAACTTGTGCAACAGTTACAACAGCCTGCAGCGCCAGGTCGAAAAAAGTGATGAGAGATCTGACGGATCTCCACTGGTCTCAGAACTGCCCATAGTACAGCAACACAAGAGAGACAAGCCGGAGCAGCTGTCGGTCAAACCCACCGTTCAAACCCAGAGTCGCTCCAGCAGCCCCATGCAAGCATCCCTCTCAGAGATGGATGATGAAGTGAGCCCAGCTCCGAGGACCAAGACAAGATACACAGGCCAGGTCCGTCTCTGCACTGCCCGATACAGTTATAATCCCTATGATGGACCAAACGAGCATCCAGAAGCAGAGCTCCCTCTTGTGGCAGGGAAGTATTTGTACGTATATGGAAACATGGACGATGATGGATTTTATGAAGGAGAGCTATTGGATGGCCAGCGTGGCCTGGTTCCCTCTAATTTTGTGGAGTTTGTCCAGGACAAGGAAAAGCCATCTATCGAGGGTGGAGAGGAGCAGGGCAGGCTGGAGCAGAGCTGTCTGAGCCTGGTGACCATAGATGGAGGCGCTCCTCTCGACAGCCTTAGCACTGATGCCCTCGGTCACTGCAGCAATGGGACAGGCGCTCTGGATGGAGAGGAACTGAGTGATGACATCGTGCCTTACCCCAGGAAGATCAACCTGATCAAACAGCTGGCGAGAAGTGTGATAGTGGCCTGGGAGGCGCCTCTAGTGCCCCTCGGCTGGGGCAACATCAACGGCTACAATATCTTAGTGGATGGGGAAGTACGCTCCTCTGTGCCGTTTGGAGGGAGGACCAAACTGCTTCTCGAAAAGCTGGACCTGGCTGCCTGCACATACCGCGTGTCAGTACAGAGCGTGACGGACAGGGGGCTCTCTGATGAGTTGCGCTGCACCTTGCTGGTGGGCCGCAATGTTGTGGTGGCGCCCACCGGTTTGCGCATGGATGATATTTTACGTGACGCTGCTGAGCTTTCGTGGCTGCCCAGTAATAGTAACTACGCCCATGTTGTGTATTTAGATGGCGTGGAGCACGCTGTGGTGAAGCCATGCTCTTACAAACTGCGTTTTGTAAACCTGAAGGCCGCCACAGTGTATAAAGTAAAAGTGTTGGCCAAACCTCACCAGGTACCCTGGCACATGCCTCtggaacagagagagaaaagagaggctGGAGTGGAGTTCTGTACCCAAGCTGCAGGGACCCCTCTGCCTCCTCAAGAAGTCCAGGTCCAGTGTGGACAAGCCCCAGGAGTCCTCCAAGTTCTGAAGCCCCCTCCAATGACACCCATGGGAACCTCCAATGGTGCAAATGTCATTGGCTACGCAGTCTGCACTAAGGGTCAGAGGATTGCTGAGGTGTTGTATCCACTGGCAGATTATGCCGCAGTAGAACTGAACCGTCTCCAGTGCTTGGAGGCCCATGAGGTTATTGTCAGGACTTTATCAGCACAAGGGGAATCTCAAGACTCCCATGCCGccgtcattccaaaccacctgCTGGTGCCTCTTCCTAAAACCCTTCCTCCCTCTCACCACATGCAATCATCTCTCCCACCCCAACAGTCCCAACCAATGCCTCCTCATCCCCAAATTCGGACCCTTCCTCCTCACCCTGGACCACAACAACCCACCCATCTCCAACCCCTTCCCGTTCGCCCCAACCAGCCCCCATCTCATCTCCATCCCCATCGTATGCCCCATCCCACACAACCCTCTCCACCCCACCTCCAGCCTTTACCACCACACCCCATCCCTCAACCCCAGCCCACCATCCCAATGCCCCAGCCTCAGACATCCATGCCCATGCCCCAACCCCAGCCCCAGCCACCCATGCCTATGCCTCAGCCCCAACAGCCCATGGCCATGCCTCAACCCCAACCGGCCATCCCCATGCTTCAACCCCAACCAACAATCCCAATGCCCCAGCCTCACATTCCCCAACTACCCCTTCCCCAGTCCCAAAGACCACTAAGTGCCAGAGAACTGGAAACCAAAGAGCCAGGGCCAGGAATGCATCATCATGGAGGAGGCCCACCTCAGCCATGGGAGCCTGGCTGCTCCCCATCAGGCATGCCCACAGGCCTGCCACATGGACACACCCTGGATGCTCCGGCCTGCCCAAACCGCCGTTCCCCATCACCTCAAAGGATCCTTCCCCAACCCAGGGGTACACTCATTCCTGACACTGTGGACAAGGCTATTGCCCGAGAGGCAGCCCAAAGAGTGGCTGCAGAAAGTGGACGGatgGAGAGGAGAAGCCAGGGTTTTCACTCTCAAAATTcagatgaggaagaggatgaggaaaGCTATCAGGCCCGCAGAAGAGGAGCATCTGTGGATGACTTCCTCAGGGGCTCAGAGCTGGGCAGGCAGTCTCATTACAGTCACAGCGAAGAGTATCATACAGAGAGCAGTCGAGGCTCGGACCTCTCGGATATCATGGAAGAAGACGAGGAGGAGTTGTATTCTGAAATGCAGCACGAAGAAGGCAGGCGACGAAACTCCCACAATGCACCCAAGACCGGAGGCAGCACTCCATCTTCGAGTCAGCTGGATCGGGAATCATACCGGAAGCCATCTCACAGAGGTCCTCAACCTCAGCGCCGACCCCTCACGGTCCCATCCATTGAGATAACCACTGAGAGTAACAGTGAAGGGAACCTCTCTCCGGTCAAGGAGGATGTTTACTATGGCAGTGTAGCGCGACACAGGACATGGTCCTCCCGAAGGCACGGGGGACGCAGGCCTCCTTATGATGGATACCGGGAACGAAGCCGCCGCTCTCCCCCTTATTATGATGAATCTGAGCAAGAGGACCCGTTTCGAGTCTTTGTGGCACTCTTTGACTATGACCCTCTCTCCATGTCCCCTAACCCTGATGCAGCTGATGAGGAGCTCCCTTTTAAAGAGGGACAGATAATCAAGgTGTATGGGGATAAGGATAATGATGGCTTTTATCGTGGAGAGATCCGTGGCAGGTCTGGACTTATTCCCTGTAACATGGTGTCGGAAATCCGTGCTGAGGATGATGAAACTATGGAGCAGCTCATGAAACAGGGATTCCTCCCTCTCAACACTCCTGTAGACAGAATAGAACAAAATAGGAGAGGTCGCCACCCAGTGGCCACAAGACGAATGGTTGCCCTGTACGACTACGACCCCAGAGAGAGCTCCCCAAACGTGGACGTTGAGGCTGAACTGACTTTCTGTGCTGGCGATATCATTGCTGTTTTTGGGGATATAGATGAAGACGGCTTCTATTACGGTGAGCTTAATGGACATCGGGGCTTGGTTCCATCCAATTTTCTCGAAGAAGTGCCTGATGACGTGGAGGTCTATCTGACGGACACTCCCTCTCACCACGGTCAGGACGAGTCCAATCCGGTACCGGCACCGCGCCCAGAGACCAAACGGGTTCCGGTGGAAAGTACAGTGCCGGCTCCGGCCCCTGGAAGACCCGCCTCTCCCACTGTGCGTCCTTTGCTTCCCGTTGGCCCAGTCAGGCCGCTGAGCCCTGCCAGGGGTCCACGAGACCTGgcatctaaaaagaaaaaaggactGCTCTCTAAGGGGAAGAAACTGCTCAAAAAGTTCTCAAAGTAAAAGTATGAGATTGATTTCAAATTCATATGGCTACAACAGCATACAGATTTCTCTCTCAAAAGGGAAACAACCAATCCCCAGTGTTTCATAAAAGTctatggtgtattttttttctcacacacacacacacacacacacacacagacacacactcacacacaaatctAAACAGCTTTCACATTAACATGCCACGtacatattctgaaaaagatCTAATATTCAGATGAAAAGGAATGACATATATAAAGATGTCACTCATACGTCAGTGAGCTTGCTAATTGGCTGTCAGAATGAAAGCATCTATTCATACTGTGATGTAGAGGACAAAGagatattgttaatatttaaggAATACCTTCAATtataattttcacatttcaaatcaaagtgctggattttgaatgaaatttttaatcTACTAGATTTTAAAGTTTGGTAGAGCCATTGGTgataaaaacagttcaaaaagcactttaaatatgGTCTGACATTGTCAGTCAAATAGcagtaaatgacaaaaacctCCAGACCATATTAAGTGCGTTAGTCTCAAACAAAAAAGACCACGATCAATCCAGTGAAAGACGAGCAAAGGTACAAAATGGCATAACTGACCAGAGCAGTCTATAAGCAAATCCTTTTAAACATTGCTGTGGCCTTCATCTAAACTCAGTAAGTACAGTATATTACCTACATCTGATGTCTCCATACATCAGTCTTTGCCAAGTATTCTCCCTTTTGCTCCCTTTCCTGCGTTTATCATGAGAATGACTCTGAAGTTATAAAATACAACGGAAAGTTTCTGTGTTTGCCTTTTAATGCACAATTCGGTGTGTTTTGGTGAATGGctcgtgtgtgtgcgtgtttgtttgtttgtttgtgtgtgtgtgtgtgtgtgtgtgtctccccTCTGCATCCATGTTCGTGCAACCccttaaaactgaaaaaggaCAAATGTTGTTATAAACTTTTGTGATAATGTGACGTGCTGCTAATTACAAGTTGTTTCCTGTTCCTTTCTAAAGTCAATAAGGGTGGTGTCATCTTcataagaagaaatatttaagcaaagATGGTGTCTTGGTGTCTCCTTGAATTTCACTTTCTAAGGGCCGGTTTAAACAGAACGCATTTTTGCCATGGCTGATTCGAGTTTTTCGACGTAAACAAGCGAAAGACTGACATTTGACTCTTTCTCAAcgttcttgtttgtttttagcaaaGGTAGTTTGACTACATGCACAGAAACACTGTGTTCTTTGCCATTCCATTTTAAACACAAGAATGCGTTCTGTATAAACagattttcatccaaaaatgaaatttctctCATTATTTAGGCAACTCTTAAACCCTAACGTCATTCCAAAACTGTATGCCtttctttattctgtggaacataaaaggagatattttgagaaatttcCCTCTCGCTCTATCTTTACTCTATCCGTATATACAATGGAAAACTGTTCAGAtttcaacattcttcaaaaggagcctttcttttatgtttcacaaaagagagaagtcatacaggtttgatcgacgctttcatttttgggtgaacagcCCTTTTAACAATGGTTTACACGAATGGGTCATGGCTGGTTATGAGAACATCATCTATAGGCCTAAATAACATATCCTTGCTGCTGTTATCATTGGCTGTTTTTCCTGAGGTCTTTGCTTGCTATTGTAGAATCAAACATGAGGACTTTGCAATTCATATTCTCAGCTACCAATACAGGTTAAGTAATACCCTCAGGCAAAACTAGCTATGATGGCTCAGTTGTTTCAAGCTATAATCTAGTAGTTTACATTAAGGGCAAAATCTCTTGCATCAACACAAAACATCTTGCCCCAGCAACTGGAAATGCGAGGTTGAGCCAACGTTTGGTGGCATCTCACAATAATGTGGCCAGTTGGATTTAGATTGCACTCTTGAATGGTTTGATCCAGGgtaaatactgtgtgtgtttttttttttatctttaaaaaaagattatattaaaagtatactatatttaagcattttaattaatacattcatTTGGGGTGAATGGAGTTTATTTGTTGTAGATGAAAAACATGGAGGGttctaatcaaaaaaaaaaaaaaatggttggaTAGCCAAAAAGGAATGTATGAAATGTTCAGCTGCCTGTCTAGCTTGCAACATCATTttgccaaaagaaaaataaaagagattacatatattttcattttacagaaatatctCTATTATTATCATAACTCCCAAGTGTTCGTTTGTGATTGGATGTTGTTCATTTCTCGGTTACTCTTTTGTACACCATTTGTagataatttataaatgtttatacttaatttacagattttcagacttttttagtGCTTTAAGATTTAATATTCAACAGTGCGTGTTCTCCATGGTGTCTTCAAGAAGAGATGCTCAAGTCTGCAAATTCTGTGCTTGCTCTGtgaattaaagagaaaaaataactTGTTGGTCTATATTTACTGATATGGACTATTGTGTGGCTGTGCATGTGTAGAACtgtgtaaaatatacattttctatgaaaataaatgtgatatttttcaa

Function

NR:

description
PREDICTED: RIMS-binding protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221521.1 True 7261 mRNA 0.47 28 4287203 4331354

Neighbor

gene id symbol gene type direction distance location
LOC122326554 LOC107708345,LOC107565383,LOC107661188,LOC107566207,LOC107722811,LOC107684913 coding upstream 778 4283196 ~ 4286425 (+)
rimbp2a si:ch73-287m6.1,LOC107565381,LOC107708362 coding upstream 58711 4207661 ~ 4228492 (+)
LOC122326660 NA coding upstream 80522 4106787 ~ 4206681 (+)
stx2a LOC107708345,LOC107565383,LOC107661188,LOC107566207,LOC107722811,LOC107684913 coding upstream 181051 4102906 ~ 4106152 (+)
vav2 vav2,LOC107661185,LOC107722824,LOC107684912 coding upstream 212784 3947066 ~ 4074419 (+)
LOC122326553 si:dkey-1d7.3,LOC107565380,LOC107566205,LOC107722807 coding downstream 7618 4338972 ~ 4359303 (+)
smpd4 smpd4,LOC107706469,LOC107700779,LOC107685262,LOC107722816 coding downstream 179016 4510370 ~ 4520829 (+)
crkl crkl,LOC107706473,LOC107589229,LOC107700778,LOC107591716,LOC107722822,LOC107703602 coding downstream 206908 4538262 ~ 4544632 (+)
nefla LOC107700775,LOC107706475,LOC107589231,LOC107703600,LOC107591713,LOC107722831 coding downstream 223004 4554358 ~ 4557626 (+)
rpl17 rpl17,LOC107722835,LOC107700774,LOC107703598 coding downstream 249280 4580634 ~ 4583302 (+)
G143717 NA non-coding upstream 200677 4075527 ~ 4086526 (+)
LOC122326258 NA non-coding upstream 365484 3919733 ~ 3921719 (+)
G143664 NA non-coding upstream 483434 3803458 ~ 3803769 (+)
LOC122326834 NA non-coding upstream 517647 3763332 ~ 3769556 (+)
G143656 NA non-coding upstream 535005 3751599 ~ 3752198 (+)
G143745 NA non-coding downstream 220067 4551421 ~ 4552468 (+)
LOC122326582 NA non-coding downstream 231980 4563334 ~ 4578128 (+)
G143751 NA non-coding downstream 257372 4588726 ~ 4589152 (+)
G143826 NA non-coding downstream 419863 4751217 ~ 4751510 (+)
G143827 NA non-coding downstream 420553 4751907 ~ 4752259 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other upstream 73431 4106801 ~ 4213772 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other upstream 582806 3701429 ~ 3704397 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other upstream 967190 3297990 ~ 3320013 (+)
gnrh2 LOC107595723 other upstream 1456847 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 2050008 2233659 ~ 2237195 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 180572 4511926 ~ 4524180 (+)
btc LOC107706483,LOC107681194,LOC107722828,LOC107703511 other downstream 373803 4705157 ~ 4709441 (+)
slc45a2 slc45a2,LOC107589269,LOC107681104,LOC107591731 other downstream 399249 4730603 ~ 4745266 (+)
fybb LOC107706487,LOC107681167,LOC107589243 other downstream 568136 4899490 ~ 4911816 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other downstream 616230 4947584 ~ 5028046 (+)

Expression


Co-expression Network