Gene
RNA
| Item | Value |
|---|---|
| gene id | mapk10 |
| gene name | mapk10,LOC107749009,LOC107662288,LOC108278438,LOC102308224 |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056719.1 |
| NCBI id | CM032088.1 |
| chromosome length | 19199999 |
| location | 263512 ~ 323760 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| symbol | description |
|---|---|
| mapk10 | Predicted to enable JUN kinase activity. Acts upstream of or within enteric nervous system development and liver development. Predicted to be active in cytoplasm and nucleus. Is expressed in brain; enteric nervous system; and eye. Human ortholog(s) of this gene implicated in pancreatic adenocarcinoma. Orthologous to human MAPK10 (mitogen-activated protein kinase 10). |
| description |
|---|
| PREDICTED: mitogen-activated protein kinase 10 isoform X3 |
| id | name | namespace |
|---|---|---|
| GO:0000165 | MAPK cascade | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0001889 | liver development | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004707 | MAP kinase activity | molecular_function |
| id | description |
|---|---|
| K04440 | JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_043221562.1 | False | 6354 | mRNA | 0.44 | 15 | 263514 | 323760 |
| XM_043221563.1 | False | 6355 | mRNA | 0.44 | 15 | 263513 | 323760 |
| XM_043221564.1 | False | 6330 | mRNA | 0.44 | 14 | 263514 | 323760 |
| XM_043221565.1 | False | 6332 | mRNA | 0.44 | 14 | 263512 | 323760 |
| XM_043221566.1 | True | 6382 | mRNA | 0.44 | 15 | 263515 | 323760 |
| XM_043221567.1 | False | 6370 | mRNA | 0.44 | 15 | 263515 | 323760 |
| XM_043221568.1 | False | 6359 | mRNA | 0.44 | 15 | 263514 | 323760 |
| XM_043221569.1 | False | 1681 | mRNA | 0.52 | 15 | 263514 | 319059 |
| XM_043221570.1 | False | 1681 | mRNA | 0.52 | 15 | 263514 | 319054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC122326942 | NA | coding | upstream | 173275 | 88162 ~ 90237 (+) |
| LOC122326268 | herc1,LOC107701925,LOC108436580 | coding | downstream | 114014 | 437774 ~ 495164 (+) |
| ccbe1 | ccbe1,LOC107662219,LOC107701959,LOC107584559,LOC107719070,LOC107600894,LOC107739739 | coding | downstream | 353106 | 676866 ~ 723059 (+) |
| lman1 | lman1,LOC107662211,LOC107739740,LOC107701961,LOC107719069 | coding | downstream | 407032 | 730792 ~ 742946 (+) |
| cplx4a | cplx4,cplx4a,LOC107662952,LOC107719084,LOC107739741,LOC107701934 | coding | downstream | 422482 | 746242 ~ 750644 (+) |
| rx3 | rax,rx3,LOC107739660,LOC107719081,LOC107584557 | coding | downstream | 429060 | 752820 ~ 755652 (+) |
| G142672 | NA | non-coding | upstream | 60337 | 202787 ~ 203175 (+) |
| G142658 | NA | non-coding | upstream | 67310 | 182416 ~ 196202 (+) |
| LOC122326263 | NA | non-coding | upstream | 83463 | 172944 ~ 180049 (+) |
| G142729 | LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962 | non-coding | downstream | 107864 | 431624 ~ 434122 (+) |
| G142807 | NA | non-coding | downstream | 402498 | 726258 ~ 726592 (+) |
| G142832 | NA | non-coding | downstream | 435515 | 759275 ~ 812057 (+) |
| G142866 | NA | non-coding | downstream | 592861 | 916621 ~ 916963 (+) |
| LOC122326171 | NA | non-coding | downstream | 724618 | 1048378 ~ 1081301 (+) |
| alpk2 | LOC107600938,LOC107662700 | other | downstream | 411962 | 735722 ~ 806106 (+) |
| entpd2b | entpd2b,LOC107662923,LOC107580497,LOC107736658 | other | downstream | 727078 | 1050838 ~ 1055925 (+) |
| glrx | glrx,LOC107661879,LOC107665229 | other | downstream | 829344 | 1153104 ~ 1156142 (+) |
| LOC122326311 | NA | other | downstream | 904238 | 1227998 ~ 1229055 (+) |
| stxbp1a | stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 | other | downstream | 1706344 | 2030104 ~ 2056679 (+) |
