LOC122326700


Basic Information

Item Value
gene id LOC122326700
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 1949736 ~ 1953226 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221805.1
tttcatgttttaactCAGGCCATGAACATAAGTAATGAGGATGACTAAATGACGGCAATACTGCAATACAGCATTAATCAACCACCTTTACCAGAAAAAGCATGTTGATATCAGCTGATATTTTTAGTAGGTCTGTGATGCAGTGCTGGGCCTGTAGTTTAaagcaaaaacgtttatttaaggttctaaaaaaagtgaatttagaTTGTTTCAAAGAAGCTGCCCAACGGTGATTCTTACATTTCTTACTTTTTGGAATATTTCTATACGTTTTTTTCTTATGGGTAATTAAACATTAAGGTTTGCAACAGTCACTTTTCGCTTctctatttaaatgaaaacacaggcCGCAAAAAAAAGACAGGATAAACGTGCGAGCGTGAGGCGCAGAGTTTCGCAAGTGCTCACTTCCTCCTCCTGTAGTGTCCTCAGCGCAGAGAAACCACAACCACACAGACACTGATACACGCACTGATACACAAAGAATCGTGCCATGCTCGTTCTGCTCTTTTACACACCGTTTGTAGTAAAATCAATGTCAGGCTTGTTTAAAGGACATTAAAAGCCCTGTGAGCTAGTGAACATGAAGCAGGCTTATATTAGAAGGTGTGTTGCTTTGAAAGCCATTATATCGCGTTCTATGTTGTTTTTGAGGAAATAGGCATGTGTCAAAGCTGCTTTAATGATCAAGGGGCGATGCAAAATGGGTGGGGAAGACATGAAATTTGAGCGATCTTAACAGGAAGCTCTTGTTTCCTACAAGAGTCACTTAGTAAATCTTTCCATCATTTAGTGACAGGACAGGTCTCCACCTATCCTCCACCACATCTTCTTGAGGGACTCGACAGCTGCGGTCTTCTCCACAAGACACGTTCCTTAAAAACAAAGCACGCATATGGGCTGCAGCATAAGATGTATAGCAAAGTGGAGGAAAAGGCATCTGCAAGCCTTAAAGACTGTCCTTGTTTTATTGCTGAccgttagcattagcattagctgGTTGCTGGTTGATAAACAACATCTCAATGGCAGCACTGAGTCGCTCCCAAACAATATTACCATCCTGTTGTGGCACTGGCCATATGGTACCCAGTACAGCCTTGAAGGGGACGTGTGTCTGAGGGACTATAACATCTCCGGATGTATCCTGGTGGACAATCGCACTCTCTATGAGAGCGCCGATCTAGTGGTTTTTCATCACTTTGAGCTAAGGGTGCACAATCAGCACCTTCCAGTCGATATTCATCGGCCTGCCAAGCAGAAGTGGGTATGGCTTTCTTTAGAAGCGCCACAAAACAACGGCAACTTGTCACCATACAACACCCTTTTCAACCTCACCATGTCATATCACCCTCAAGCCGACATTACCGTGCCGTACGGGAAACTGTTACAGAAGAAACCAGATTTCGATGTTGTTATACCAGAAAACAAGAGTTACGAAGCCTGCTGGGTGGTGAGCAACTACCAAAAACGGCACAAAAGGAGCGACGTGTACCAAGAGCTAAAGAAGAACCTCAAAGTGCAACTCTACGGCCTCGCCGCCACAAAACCTCTACCGAAGGAGGCGCTGCTTCCAACGATTTCACGCTGTTATTTCTACCTGGCCTTTGAAAACACGCAGTCTCCACATTATATCACCGAGAAGCTCTGGAGGAACTCTTTCCAGGCTGGGACCGTGCCTGTGGTGCTGGGACCGTCCCGAAGAGACTATGAAGCCGTGGTGCCTCCGAACTCCTTCATCCACGTAGATGACTTTAAATCTATTAAGGCCCTGGCTGAGTATTTGAGAGGCGTAATTAAAGATCCGAAAAGGTATAATGAGTATTTTACCTGGAGACAAGACTATGTGGTTAAATTATATACAGACTGGAGAGAGAGACTGTGCAATATCTGTCCCATATACGGACGATTTCCGACTCAAAAGGTTTACGAGGATTTGAGTGTGTGGACAAAATGGTAACGTAACGGGCGGCGGGCGTTCACACAGAACTGCTTTAATAAATCTCTCAAGAATCAGGGAAGATACATGTCCTAATTTCGCTGAGTTCAATGTGTTCCcagaacaacatttttattttgtcttatggGTTCGGGATCGGGATAAGTCTGTATTTTTGGACAGTTATGTTGACCCAGGGAAGACGCTGAACGTTTAATTTCTTTCAACTTGAACGATGCATTTGCACCGAAAAAGATGCAAGACACGTGTGTAGATGAAAGACATTTGTCTAGAGCGCGTTCACGcaggaaaaaattattaaaatgctacaTGATAGAATAAAAAAGATGCAGGgtggtaaaaaaagaaaaaaatgcaaggtCCTATATaagttttattaacattatattaacttGAGACATCAAAGGTGTCCGTTAAAGGGGAAGTGATGGTCTACATGGAACTGAAAAACATAACGGAAAGCaaaaaacgcacacacaaacaagcaataGGGTAGTGGGGTGCCGGGTCTAGAGTATACCGTTTGAAAGTTGCCTTTTTGCAAATGCGAATGAAAAAACGGGCAAAATAGCACGCTTAATGtacaaaaactgcaaaaacagtACAGCGAAAAGCAAAAGCGCACGCCACATGATGTGGACTGTGAaacg

Function

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0032580 Golgi cisterna membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008417 fucosyltransferase activity molecular_function

KEGG:

id description
K07635 FUT7; galactoside alpha-1,3-fucosyltransferase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221805.1 True 2610 mRNA 0.43 2 1949736 1953226

Neighbor

gene id symbol gene type direction distance location
zgc:113162 LOC107692271,LOC107584524,LOC107661621,LOC107736869 coding upstream 100251 1830684 ~ 1849485 (+)
LOC122326489 camkk2,LOC107739694,LOC107736868,LOC108437385 coding upstream 119584 1809407 ~ 1830152 (+)
snrpd3l snrpd3,smd3,LOC105014836,LOC106563120 coding upstream 140897 1807195 ~ 1808839 (+)
adora2ab adora2ab,LOC107736926,LOC107600912,LOC107675636,LOC107584529,LOC107739748,LOC107661642 coding upstream 144824 1796942 ~ 1804912 (+)
specc1lb specc1lb,LOC107662600,LOC107600876,LOC107675626,LOC107736902,LOC107584528 coding upstream 155094 1771331 ~ 1794642 (+)
slc31a2 LOC107661547 coding downstream 42561 1995787 ~ 1999047 (+)
LOC122326937 NA coding downstream 327355 2280581 ~ 2287288 (+)
LOC122326565 LOC107579035 coding downstream 665009 2618235 ~ 2627353 (+)
LOC122326563 LOC107579035,LOC107736917 coding downstream 677870 2631096 ~ 2656760 (+)
smarcb1b smarcb1b,smarcb1,LOC107661349,LOC107736887 coding downstream 791661 2744887 ~ 2752853 (+)
G143153 NA non-coding upstream 5233 1873761 ~ 1944503 (+)
G143155 NA non-coding upstream 66206 1877671 ~ 1883530 (+)
G143144 NA non-coding upstream 184641 1764761 ~ 1765095 (+)
G143140 NA non-coding upstream 185993 1763476 ~ 1763743 (+)
G143139 wdr34,LOC107736865,LOC107584613 non-coding upstream 186899 1762382 ~ 1762837 (+)
LOC122326018 NA non-coding downstream 28697 1981923 ~ 1984090 (+)
G143290 NA non-coding downstream 118948 2072174 ~ 2072661 (+)
G143315 NA non-coding downstream 227846 2181072 ~ 2181602 (+)
G143339 NA non-coding downstream 382033 2335259 ~ 2335791 (+)
G143340 NA non-coding downstream 383555 2336781 ~ 2338470 (+)
LOC122326311 NA other upstream 720681 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 793594 1153104 ~ 1156142 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other upstream 893811 1050838 ~ 1055925 (+)
alpk2 LOC107600938,LOC107662700 other upstream 1143630 735722 ~ 806106 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 76878 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 280433 2233659 ~ 2237195 (+)
gnrh2 LOC107595723 other downstream 875888 2829114 ~ 2830356 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 1344764 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 1748203 3701429 ~ 3704397 (+)

Expression


Co-expression Network