arid6 (LOC107739744,LOC107662105,LOC107600907,LOC107719083,LOC108436592)


Basic Information

Item Value
gene id arid6
gene name LOC107739744,LOC107662105,LOC107600907,LOC107719083,LOC108436592
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 942853 ~ 948284 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221937.1
GTTGAATAGTCATCTCGGCGAGGCCATGATTTCATTCAGGTGTAGAGAAACGGCGTGGAGGCATCACAAAACGCTTCTGCGAAACGAACCGCTAAGGGCAGCATACTTAGCTTAACTTTCTCTGGATTACATTCTTCTCCAATTAGGATCTATCCAACGAACCATCATCCCACGGACAAATCTAAAGAGACACAGGTCAGTACGATGGAGCAGGACGGCCCGCAGGAGAAGAGATCAGATCAGGGAGAGGAGATGACAGAGGAGAGCTTCCTTAAAGAGCTCTACCTCTTTATGAAACAGAGAGACACTCCGATTGAGAGAATACCTCATCTAGGCTTCAAACAAATCGATATGTTCCTAATGTACAAGACAGTAAAGGAGCTAGGAGGCTACcagcagGTTACTGCACAGCAGTTATGGAAAAAGGTTTACAACATTCTTGGAGGAAACCCACGCAGCACTAGTGCAGCCACCTGCACTCGCAGACACTATGAAAAGCTGCTTCTTCCCTACGAGTGTCACCAAAATGGATACAGGGGCGATATTGTCTTCAGGACCCCGCGATCGCAGAAACGCTTTCACCCCAGCAGTTACAGTGACTTTGAGCATGAATACCCCAGGAATAGTAAACATGCAGATTTCCGACACCTCTCCGCATTCCCTCAGGCTTCTCAGAACATGTTTACGGAGCATCAGAGACAGATGTTTAGCATGCCTTTGAATATTGCCCCATATTTCCCACACGGTGGTACAACTCTATCCAATTACATGGTTCTTCAAGAATCTACATTGCCTCAACTAAACCTCAGCCCTTCTCAAGACCTTCCCCAACCGCCTGCTTCGTATTTGGGCACATCCTCTTTGGAGGCTCAGAGCCGCAACCAGTCACTTAATAAGCTACGCCACCTGGCTAAAGAGTACAAGTCATCCTCTGGTTGGGAAGAACCGCTCAACCTCAGCCGGAAAGAAAACAGACTTGAGACACTGACTGACATGCCGTCATCTTTCAGTCCACCTTCAAAAAAGACCAAGTTCCTCAACGAAGTCTCACCACTTTACACTCCAAGAGGTTTGGGAGCCGAAGAAGGTGGAGAAAAGGGGGATACAGCGGACAGAACAGCAGGACCTAGTCCGCCGACGGCTGACATCATTGATCTCACTTCCTCTTCCACTGCCAATCCAGTCCCACGGAGGGCAAGCCCTCCTTCAGTGAACCTCTTCAACCGTAGACTGACCTATTCTGAAGCATTTGCTATGAAAGCACGGGAGCGAGATCTGCATGCAGACTGGTTAAAGGAAGAATCTTCTGGTGCACCTAAATTAGGGATCTTGAACCGGAGCAATCCTCTTGGACACCCACCCGTAGATGCTAACGGTAATATGGAGATTCAGATTCCTCTAAAGCTTCTGCAGGAGCTGATTAGGAGAGGACTGCTCTCCAACCCGGCATTTACGGCAAACAGCCCTGTGTCTCAAGACCCAAACAAAGCCGAAGAACAACCCGAGCACAAGTTCCACATGCGATCCCGTCCAAAAACGCCCGAGTGCTCTGCCACAGCCGAGGAACCGACCAATTTGAGTATAAAAAGAAACCTTTCTGAATCTAACCCTCAAGAAAATGGTATGAGGAAGCACAGACTCTTCGGTGGCAATGGCATTCCAGCAGAAACAAAGCTCCAGATGAACACTTCTTTACATGTAAACAAGTTCTCTCTGGGAAGCGATGCCCCAGGATCTTCTCAACCTACACAGGCACAGGTTCCTCTGATTAAGAACCAAGACAGCATGTTTCTCAGACTTCCCAGTTACAGTGAAGACACTCCTCTCTCTTTGACGACAAAGCCTGGAAGGAAGTCAGAGAAAGTGATGGGAACAGCTAATGGTGCAGCGAAGGAAATCTCAACTTCCCCACCTTTGATACAAGTGACGTCAGACCACCTCAAACTCCTTCTGGCAAACCTACCATATAGACTGGAAAGAGGGCAGACATTTTGAGACTTTGGGCAGCTGACAAATTCTTTCCCTCGGCCAATGTTGCAGACTTGCCAAATTAGCCCCTCGCGTTGCATTACTGAAGGATTTCTGAAAAAGATGAACTGGAAGGAGAAATGTTGAACAGATATGCAACTGTAGCATGACAGCACTCTCAGTCAAGCATAACATGCTTTTGACTGATTAAacttttgtataaaatgtatagaatTTTGAAAAGGGTCAGCTCaggaaaaacatttgtttgcagTCTGTAAATCGCATTAAATTGTGAGACTTTGAATAAAACAATGGTACATTTTTTGTTAACTCAGTTTATGATGAAGCACTGATACTTTGGCAGCAAAGCACAgacctttttgtattttttttaattaaaatgtaaacgtgtaaaatatataaataagcttgattattttttgttatttcattctACAATTCATTTTTCAACGGCAAATTATTTCATAGAAGCAAAgtcaaaatgactttaaaacatttagattaaGGATTCTTTTTGACtctataacaaatatataaatgtatatattttgtcattgtttataCTGAATATGAATTCTTGGCAAACATTATCTCTGAATTTCTAAGAATATATGAGGTATCACGTACACATGTTGTTTTACTGGTTACACAGGAACCTATGAAATATAATGCTAAGATCTACTCTCGATACTTGCATACAAGATTTCAAGACGCTAAGATGAATTATGAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107739744

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221937.1 True 2722 mRNA 0.44 6 942853 948284

Neighbor

gene id symbol gene type direction distance location
LOC122326806 LOC107719062 coding upstream 3294 926358 ~ 939559 (+)
agxt2 agxt2,LOC107662137,LOC107719064,LOC107739667,LOC102783298 coding upstream 27814 901673 ~ 915039 (+)
prlra LOC107662152,LOC107739665,LOC107600937,LOC107665241,LOC107584552 coding upstream 41503 878229 ~ 901350 (+)
oacyl LOC107600942,LOC107662202,LOC107739742,LOC107719080,LOC107584632 coding upstream 156321 779285 ~ 786532 (+)
znf532 LOC107662164,LOC107739659,LOC107600940,LOC107584556,LOC107701962,LOC107719066 coding upstream 163710 762646 ~ 779143 (+)
gtf3c5 gtf3c5,LOC107600935,LOC107662094 coding downstream 37153 985437 ~ 990633 (+)
LOC122326353 cel.2,cell,LOC107662085,LOC107665230,LOC107584549,LOC107665247,LOC107754621 coding downstream 43707 991991 ~ 998077 (+)
LOC122326352 cel.2,cell,LOC107662085,LOC107665230,LOC107665247,LOC107584549,LOC107754621 coding downstream 50940 999224 ~ 1005090 (+)
zgc:92275 zgc:92275,LOC107662064,LOC107754619,LOC107665231,LOC107739715,LOC105902521,LOC105024189,LOC106565467 coding downstream 57511 1005795 ~ 1015300 (+)
grin1a grin1a,LOC107662014,LOC107754622,LOC108435476,LOC108278500,LOC107600932 coding downstream 75340 1023624 ~ 1048011 (+)
G142866 NA non-coding upstream 25890 916621 ~ 916963 (+)
G142832 NA non-coding upstream 130796 759275 ~ 812057 (+)
G142807 NA non-coding upstream 216261 726258 ~ 726592 (+)
G142729 LOC107749016,LOC107565393,LOC107701931,LOC107719087,LOC107584674,LOC107662962 non-coding upstream 508731 431624 ~ 434122 (+)
G142672 NA non-coding upstream 739678 202787 ~ 203175 (+)
LOC122326171 NA non-coding downstream 100094 1048378 ~ 1081301 (+)
G142941 NA non-coding downstream 123984 1072268 ~ 1074041 (+)
G142933 NA non-coding downstream 133883 1082167 ~ 1083273 (+)
G142954 NA non-coding downstream 141959 1090243 ~ 1102107 (+)
G142963 NA non-coding downstream 157201 1105485 ~ 1105817 (+)
alpk2 LOC107600938,LOC107662700 other upstream 136747 735722 ~ 806106 (+)
entpd2b entpd2b,LOC107662923,LOC107580497,LOC107736658 other downstream 102554 1050838 ~ 1055925 (+)
glrx glrx,LOC107661879,LOC107665229 other downstream 204820 1153104 ~ 1156142 (+)
LOC122326311 NA other downstream 279714 1227998 ~ 1229055 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other downstream 1081820 2030104 ~ 2056679 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other downstream 1285375 2233659 ~ 2237195 (+)

Expression


Co-expression Network