or62b3 (LOC107719021,LOC107703497,LOC107573649)


Basic Information

Item Value
gene id or62b3
gene name LOC107719021,LOC107703497,LOC107573649
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 5661724 ~ 5662650 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221975.1
ATGGATAATATAACATCTTTTTCTACCTACACCCTGATGGAACCAAAAGACTCTAAAtcatacagacatatatatttcacatgctTTTTGGTGCTCTATATTATGATACTTCTTGTTAACACTTGggtcagtgttgttattgtctTGGAGAAAGCTCTTCATGAACCAATGTATATCTTTCTGTGCAATCTCTGTGTAAATGATATTTATGGAGCAGCAGGATTTTATCCTAAATTTCTACATGATTTATTGCTGGATTCATATGTGATTCCTTCATACATGTGTGCATTTCAAGCTTTTGTGATCTACGGTTCAGTTATGTGTGACTGTACTACAATAACTATAATGGCCTATGACAGATATGTGGCCATATGTCAACCTTTAGACTATCATACGAAACTGAACAAATTTTCATGCAGTATATTACTAGGCTTCTGTTGGATCCTATCCTTTGTTTACATGATTGTTCTTCTTGTGTTGTCAAATAAGATGAAATTGTGTAAatatcacattaataaattgtattgtgACAATTGGTCTATGGTAAAACTTTCATGCGAGTCAACTATCATCAAtaatatttatggattttttgtaatatcattttattcttgcctgtgtgtttttgttattttgtcctATATAAAACTTATAATTGCATGCAAAGCATCATTAGAATGCAGAAGGAAATTTTGGCAGACATGTGTGCCTCATATGTTTATATTGATTAATTATGttgttgctgtattttttgatgCCATGTACAGTAGATATGGCTCAAACAATGTCTcagaaatattgcaaaattTTTTGACTCTAGAGATGCTTATTGTGCCACCTCTTGTTAATCCAGTAATCTATGGGTTAAAACTTCAAGAAGTGCGCAAAAGAATCTTGAAATCATTTGTTAATATCAGAAGACAATAA

Function

NR:

description
PREDICTED: olfactory receptor 2A12-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007608 sensory perception of smell biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221975.1 True 927 mRNA 0.32 1 5661724 5662650

Neighbor

gene id symbol gene type direction distance location
LOC122326971 or125-7,LOC107573644,LOC107719003,LOC107703451 coding upstream 8486 5652309 ~ 5653238 (+)
LOC122326807 LOC107742230,LOC107703498,LOC107573064,LOC107735684 coding upstream 14389 5646442 ~ 5647335 (+)
tgfb1b LOC107681095,LOC107706521,LOC107589304,LOC107703499,LOC107754964,LOC107573058 coding upstream 30415 5627008 ~ 5631309 (+)
b9d2 b9d2,LOC107589303,LOC107706523,LOC107681120,LOC107573061,LOC107703500 coding upstream 35684 5623883 ~ 5626040 (+)
rtn2b rtn2,rtn2b,LOC107706456,LOC107703556,LOC107708513 coding upstream 131521 5524580 ~ 5530203 (+)
or62b5 or125-3,LOC107703496,LOC107719020,LOC107573648 coding downstream 2710 5665360 ~ 5666286 (+)
LOC122326972 LOC107706424,LOC107681105,LOC107603271 coding downstream 6765 5669415 ~ 5670368 (+)
LOC122326973 or125-1,LOC107573645,LOC107719002,LOC107719001,LOC107703447,LOC107703448 coding downstream 9694 5672344 ~ 5674110 (+)
LOC122326974 or125-1,LOC107719002,LOC107573645,LOC107719001,LOC107703448,LOC107703447,LOC107573646 coding downstream 16420 5679070 ~ 5686068 (+)
LOC122326975 or125-1,LOC107719002,LOC107573645,LOC107703448,LOC107719001,LOC107703447 coding downstream 23548 5686198 ~ 5687139 (+)
G144126 cbr1l,LOC107706524,LOC107573060,LOC107681174,LOC792137,LOC107589305 non-coding upstream 28873 5632041 ~ 5632851 (+)
G144081 LOC107708509 non-coding upstream 122260 5538200 ~ 5539464 (+)
G143990 LOC107589256,LOC107706512,LOC107681141,LOC107708519 non-coding upstream 286802 5366192 ~ 5374922 (+)
G144007 NA non-coding upstream 333319 5327230 ~ 5328405 (+)
G143937 NA non-coding upstream 509835 5151557 ~ 5151889 (+)
G144129 NA non-coding downstream 22178 5684828 ~ 5685097 (+)
G144130 NA non-coding downstream 42890 5705540 ~ 5706835 (+)
LOC122326140 NA non-coding downstream 130214 5792864 ~ 5794604 (+)
G144157 nkx6.1,nkx6-1,LOC107703597,LOC107700773,LOC107706438,LOC107722812 non-coding downstream 267119 5929769 ~ 5930885 (+)
G144212 NA non-coding downstream 399774 6062424 ~ 6062680 (+)
kcnk12l LOC107589263,LOC107708511,LOC107703554,LOC107591682,LOC107681176 other upstream 143788 5502033 ~ 5517936 (+)
G144077 NA other upstream 150978 5508665 ~ 5510746 (+)
sdhaf1 sdhaf1 other upstream 153331 5506546 ~ 5508393 (+)
qpctlb qpctl,qpctlb,LOC107706454,LOC107703555,LOC107708501,LOC107591735 other upstream 155291 5501103 ~ 5506433 (+)
tnksa tnksa,tnks,LOC107706493,LOC107681059,LOC107591704,LOC108279024,LOC108436993 other upstream 633678 4947584 ~ 5028046 (+)
neu3.1 neu3.1,LOC107718989,LOC107703553,LOC107706460,LOC107681103,LOC107548159 other downstream 69790 5732440 ~ 5735137 (+)
LOC122326918 LOC107706529,LOC107548159,LOC107681093,LOC107719017,LOC107573856,LOC107703552 other downstream 73263 5735913 ~ 5741905 (+)
LOC122326980 tnksa,LOC107706493,LOC107681059,LOC107589272,LOC107708542,LOC107703465,LOC103369208 other downstream 132112 5794762 ~ 5799702 (+)
G144152 NA other downstream 185291 5847941 ~ 5849053 (+)
G144330 NA other downstream 871450 6534100 ~ 6535794 (+)

Expression


Co-expression Network