LOC122326816


Basic Information

Item Value
gene id LOC122326816
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 3291697 ~ 3294008 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043221981.1
GAAGTCataatggcttttattttagCAGTAGTGACGGGTGCGCGCGCTGCGGTTACCCTCGAGCGCATCCGGCATCATGTCGGCATCTGAGCGCGCACTCGAGAGCCCATCAGATGGGAGCTCTCCTCCATCCAAACAAGAAGtGGAGCCGATTCCTCCTGTAAAGGgaaaacagactgaaaacaTGACGGGGCGTCAGGATGAGGGACGTCCCACCACGTCCACTAAAGCATTCTTAGGCAGTGCTGGTAAAAGCTCTTCTCCCTCCACCTCGTCTCTCTCGTCTCCTTCGTCATCAGCGTCCGGCAGAGCTAAAATGAGCGTGTGCGGTCCGAGCAGTAAGACGACtccgtcctcctcctcctccctcgtcctcctcctcttcatcatcctcgTCCTCCTCAGCTCTGCCTTCGGCCGGTCCTCCTGCTAAAGTCCACCGCGCACGCAAGACCATGAACAGACCGCCCTTCCCACAGATAAAGTCTGTCGAGTCGATCGCAGCAGCTACGGCTGAGAAACCCGCCGGCGGCTCCAAAACAGACGCTGACGCAGTTGTGAAGAAGCGTAAAGTGGGGTTGGAGCCTGATGTCTCGGCCAATCCTGAAGGAACCCCAGAGAA

Function

GO:

id name namespace
GO:0031017 exocrine pancreas development biological_process
GO:0051570 regulation of histone H3-K9 methylation biological_process
GO:0022008 neurogenesis biological_process
GO:0043229 intracellular organelle cellular_component
GO:0008168 methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043221981.1 True 622 mRNA 0.57 6 3291697 3294008

Neighbor

gene id symbol gene type direction distance location
LOC122326343 LOC107692324,LOC107595714,LOC107737877,LOC107686912,LOC107736923,LOC107563914 coding upstream 315646 2966166 ~ 2976051 (+)
LOC122326342 NA coding upstream 327021 2957186 ~ 2964676 (+)
LOC122326345 NA coding upstream 335117 2954779 ~ 2956580 (+)
trnaa-ugc_120 NA coding upstream 344774 2946852 ~ 2946923 (+)
fam169ab fam169ab,LOC107692296,LOC107548785,LOC107736892,LOC107737867,LOC107661277 coding upstream 430347 2845780 ~ 2861350 (+)
LOC122326784 ube2g1b,ub2g1,LOC107686891,LOC107595690,LOC106579958,LOC103152401,LOC106931442 coding downstream 32492 3326500 ~ 3329805 (+)
LOC122326952 NA coding downstream 42977 3336985 ~ 3338965 (+)
LOC122326141 aqp3b,LOC107686895,LOC107737882,LOC107692335,LOC107707134,LOC107556931,LOC107595728 coding downstream 181975 3475983 ~ 3480494 (+)
LOC122326336 vps29,LOC107595689 coding downstream 199976 3493984 ~ 3497228 (+)
gpn3 gpn3,LOC107686892,LOC107692302,LOC106563155 coding downstream 205637 3499645 ~ 3502742 (+)
G143509 NA non-coding upstream 354080 2930262 ~ 2937617 (+)
G143491 NA non-coding upstream 428680 2862772 ~ 2863017 (+)
G143465 NA non-coding upstream 490349 2800730 ~ 2801348 (+)
G143385 NA non-coding upstream 748390 2487403 ~ 2543307 (+)
G143349 NA non-coding upstream 801497 2426489 ~ 2490200 (+)
G143578 NA non-coding downstream 21169 3315177 ~ 3315473 (+)
LOC122326852 NA non-coding downstream 42253 3336261 ~ 3336689 (+)
G143590 NA non-coding downstream 194503 3488511 ~ 3492587 (+)
G143638 NA non-coding downstream 314911 3608919 ~ 3610050 (+)
G143656 NA non-coding downstream 457591 3751599 ~ 3752198 (+)
gnrh2 LOC107595723 other upstream 461341 2829114 ~ 2830356 (+)
G143321 LOC107739705,LOC107661415,LOC107736881,LOC107692311,LOC107548771 other upstream 1054502 2233659 ~ 2237195 (+)
stxbp1a stxbp1a,stxbp1,LOC107661518,LOC107736879,LOC108437460 other upstream 1235018 2030104 ~ 2056679 (+)
LOC122326311 NA other upstream 2062642 1227998 ~ 1229055 (+)
glrx glrx,LOC107661879,LOC107665229 other upstream 2135555 1153104 ~ 1156142 (+)
LOC122326950 ehmt2,LOC107661424,LOC107739706,LOC107706570,LOC107566632,LOC107751678,LOC107694038,LOC107694747,LOC107557450 other downstream 3982 3297990 ~ 3320013 (+)
G143650 barhl1b,barhl1,LOC107556939,LOC100712077,LOC102792687,LOC107708351,LOC107595696 other downstream 407421 3701429 ~ 3704397 (+)
G143725 si:ch73-287m6.1,LOC107565381,LOC107708362 other downstream 812793 4106801 ~ 4213772 (+)
G143726 si:dkey-112m2.1,LOC107661187,LOC107708339,LOC107565378,LOC107684910,LOC107566201,LOC108437247 other downstream 838428 4132436 ~ 4386212 (+)
si:ch211-222n4.2 LOC107722820,LOC107591717,LOC107685267,LOC107589267,LOC107706417 other downstream 1217918 4511926 ~ 4524180 (+)

Expression


Co-expression Network